RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 CACFD1Q9UGQ2 172 aa9.96□□□□□ -0.81
CLSTN3-207ENST00000537408 CUL9Q8IWT3 2517 aa9.96□□□□□ -0.81
CLSTN3-207ENST00000537408 NPIPB8E9PQR5 432 aa9.96□□□□□ -0.81
CLSTN3-207ENST00000537408 M0QZK8 103 aa9.96□□□□□ -0.81
CLSTN3-207ENST00000537408 GFRA3O60609 400 aa9.96□□□□□ -0.81
CLSTN3-207ENST00000537408 GGCTO75223 188 aaKnown RBP9.96□□□□□ -0.81
CLSTN3-207ENST00000537408 OR2C1O95371 312 aa9.96□□□□□ -0.81
CLSTN3-207ENST00000537408 GTF2F2P13984 249 aa9.96□□□□□ -0.81
CLSTN3-207ENST00000537408 SLC16A1P53985 500 aa9.96□□□□□ -0.81
CLSTN3-207ENST00000537408 PCBP4P57723 403 aaKnown RBP9.96□□□□□ -0.81
CLSTN3-207ENST00000537408 ELAVL3Q14576 367 aaKnown RBP9.96□□□□□ -0.81
CLSTN3-207ENST00000537408 MAJINQ3KP22 176 aa9.96□□□□□ -0.81
CLSTN3-207ENST00000537408 ENTPD8Q5MY95 495 aa9.96□□□□□ -0.81
CLSTN3-207ENST00000537408 ETFRF1Q6IPR1 90 aa9.96□□□□□ -0.81
CLSTN3-207ENST00000537408 OOSP2Q86WS3 158 aa9.96□□□□□ -0.81
CLSTN3-207ENST00000537408 CD300LFQ8TDQ1 290 aa9.96□□□□□ -0.81
CLSTN3-207ENST00000537408 PIK3IP1Q96FE7 263 aa9.96□□□□□ -0.81
CLSTN3-207ENST00000537408 F2RL3Q96RI0 385 aa9.96□□□□□ -0.81
CLSTN3-207ENST00000537408 KLF16Q9BXK1 252 aaPredicted RBP9.96□□□□□ -0.81
CLSTN3-207ENST00000537408 AHSPQ9NZD4 102 aa9.96□□□□□ -0.81
CLSTN3-207ENST00000537408 FBXO4Q9UKT5 387 aa9.96□□□□□ -0.81
CLSTN3-207ENST00000537408 J3QLW9 94 aa9.96□□□□□ -0.82
CLSTN3-207ENST00000537408 BCHEP06276 602 aa9.96□□□□□ -0.82
CLSTN3-207ENST00000537408 ZNF19P17023 458 aa9.96□□□□□ -0.82
CLSTN3-207ENST00000537408 PDZD11Q5EBL8 140 aa9.96□□□□□ -0.82
CLSTN3-207ENST00000537408 TCTN3Q6NUS6 607 aa9.96□□□□□ -0.82
CLSTN3-207ENST00000537408 ZNF433Q8N7K0 673 aaPredicted RBP9.96□□□□□ -0.82
CLSTN3-207ENST00000537408 BMPERQ8N8U9 685 aa9.96□□□□□ -0.82
CLSTN3-207ENST00000537408 OR5AP2Q8NGF4 316 aa9.96□□□□□ -0.82
CLSTN3-207ENST00000537408 OR5M8Q8NGP6 311 aa9.96□□□□□ -0.82
CLSTN3-207ENST00000537408 OR1J2Q8NGS2 313 aa9.96□□□□□ -0.82
CLSTN3-207ENST00000537408 SYNPRQ8TBG9 265 aa9.96□□□□□ -0.82
CLSTN3-207ENST00000537408 GAL3ST4Q96RP7 486 aa9.96□□□□□ -0.82
CLSTN3-207ENST00000537408 ORAI3Q9BRQ5 295 aa9.96□□□□□ -0.82
CLSTN3-207ENST00000537408 TRPC4Q9UBN4 977 aa9.96□□□□□ -0.82
CLSTN3-207ENST00000537408 DOCK5Q9H7D0 1870 aa9.96□□□□□ -0.82
CLSTN3-207ENST00000537408 ZNF208O43345 1280 aa9.96□□□□□ -0.82
CLSTN3-207ENST00000537408 CD74P04233 296 aa9.96□□□□□ -0.82
CLSTN3-207ENST00000537408 HNF1AP20823 631 aa9.96□□□□□ -0.82
CLSTN3-207ENST00000537408 NSG1P42857 185 aa9.96□□□□□ -0.82
CLSTN3-207ENST00000537408 CHIT1Q13231 466 aa9.96□□□□□ -0.82
CLSTN3-207ENST00000537408 TGIF1Q15583 401 aa9.96□□□□□ -0.82
CLSTN3-207ENST00000537408 ODF4Q2M2E3 257 aa9.96□□□□□ -0.82
CLSTN3-207ENST00000537408 FAM83HQ6ZRV2 1179 aaPredicted RBP9.96□□□□□ -0.82
CLSTN3-207ENST00000537408 FJX1Q86VR8 437 aa9.96□□□□□ -0.82
CLSTN3-207ENST00000537408 DEFB119Q8N690 84 aa9.96□□□□□ -0.82
CLSTN3-207ENST00000537408 C19orf47Q8N9M1 422 aaKnown RBP9.96□□□□□ -0.82
CLSTN3-207ENST00000537408 PIGXQ8TBF5 258 aa9.96□□□□□ -0.82
CLSTN3-207ENST00000537408 NPRL2Q8WTW4 380 aa9.96□□□□□ -0.82
CLSTN3-207ENST00000537408 KLHDC7BQ96G42 594 aa9.96□□□□□ -0.82
CLSTN3-207ENST00000537408 ZNF426Q9BUY5 554 aa9.96□□□□□ -0.82
CLSTN3-207ENST00000537408 OR51V1Q9H2C8 321 aa9.96□□□□□ -0.82
CLSTN3-207ENST00000537408 MMP17Q9ULZ9 603 aa9.96□□□□□ -0.82
CLSTN3-207ENST00000537408 TMED3Q9Y3Q3 217 aa9.96□□□□□ -0.82
CLSTN3-207ENST00000537408 TIMM10BQ9Y5J6 103 aa9.96□□□□□ -0.82
CLSTN3-207ENST00000537408 A0A087WZY1 265 aa9.95□□□□□ -0.82
CLSTN3-207ENST00000537408 A0A1W2PPK0 400 aa9.95□□□□□ -0.82
CLSTN3-207ENST00000537408 GPR39O43194 453 aa9.95□□□□□ -0.82
CLSTN3-207ENST00000537408 PLPP2O43688 288 aa9.95□□□□□ -0.82
CLSTN3-207ENST00000537408 RPLP1P05386 114 aaKnown RBP9.95□□□□□ -0.82
CLSTN3-207ENST00000537408 OR4E1P0C645 316 aa9.95□□□□□ -0.82
CLSTN3-207ENST00000537408 AQP2P41181 271 aa9.95□□□□□ -0.82
CLSTN3-207ENST00000537408 SULT1A1P50225 295 aa9.95□□□□□ -0.82
CLSTN3-207ENST00000537408 PCBP3P57721 371 aaKnown RBP9.95□□□□□ -0.82
CLSTN3-207ENST00000537408 RGS8P57771 180 aaPredicted RBP9.95□□□□□ -0.82
CLSTN3-207ENST00000537408 SLC9A5Q14940 896 aa9.95□□□□□ -0.82
CLSTN3-207ENST00000537408 TMEM35AQ53FP2 167 aa9.95□□□□□ -0.82
CLSTN3-207ENST00000537408 OR4K17Q8NGC6 315 aa9.95□□□□□ -0.82
CLSTN3-207ENST00000537408 OR4K1Q8NGD4 311 aa9.95□□□□□ -0.82
CLSTN3-207ENST00000537408 SMPDL3BQ92485 455 aa9.95□□□□□ -0.82
CLSTN3-207ENST00000537408 FOXRED1Q96CU9 486 aaPredicted RBP9.95□□□□□ -0.82
CLSTN3-207ENST00000537408 MYLKQ15746 1914 aa9.95□□□□□ -0.82
CLSTN3-207ENST00000537408 A0A0B4J2A0 478 aa9.95□□□□□ -0.82
CLSTN3-207ENST00000537408 IDSB3KWA1 339 aa9.95□□□□□ -0.82
CLSTN3-207ENST00000537408 SEMA4FO95754 770 aa9.95□□□□□ -0.82
CLSTN3-207ENST00000537408 CER1O95813 267 aa9.95□□□□□ -0.82
CLSTN3-207ENST00000537408 CHRM4P08173 479 aa9.95□□□□□ -0.82
CLSTN3-207ENST00000537408 CR2P20023 1033 aa9.95□□□□□ -0.82
CLSTN3-207ENST00000537408 CCR4P51679 360 aa9.95□□□□□ -0.82
CLSTN3-207ENST00000537408 EFNB1P98172 346 aa9.95□□□□□ -0.82
CLSTN3-207ENST00000537408 ZNF77Q15935 545 aa9.95□□□□□ -0.82
CLSTN3-207ENST00000537408 TEX26Q8N6G2 289 aa9.95□□□□□ -0.82
CLSTN3-207ENST00000537408 FRMD1Q8N878 549 aa9.95□□□□□ -0.82
CLSTN3-207ENST00000537408 SLC30A7Q8NEW0 376 aa9.95□□□□□ -0.82
CLSTN3-207ENST00000537408 DCUN1D4Q92564 292 aa9.95□□□□□ -0.82
CLSTN3-207ENST00000537408 PACRGQ96M98 296 aaPredicted RBP9.95□□□□□ -0.82
CLSTN3-207ENST00000537408 LRFN3Q9BTN0 628 aa9.95□□□□□ -0.82
CLSTN3-207ENST00000537408 POTEKPQ9BYX7 375 aa9.95□□□□□ -0.82
CLSTN3-207ENST00000537408 SHPKQ9UHJ6 478 aa9.95□□□□□ -0.82
CLSTN3-207ENST00000537408 R4GN57 208 aa9.95□□□□□ -0.82
CLSTN3-207ENST00000537408 A8MWP6 167 aa9.95□□□□□ -0.82
CLSTN3-207ENST00000537408 ANKRD66B4E2M5 251 aa9.95□□□□□ -0.82
CLSTN3-207ENST00000537408 HBA1P69905 142 aa9.95□□□□□ -0.82
CLSTN3-207ENST00000537408 PIN1Q13526 163 aaPredicted RBP9.95□□□□□ -0.82
CLSTN3-207ENST00000537408 OR7A5Q15622 319 aa9.95□□□□□ -0.82
CLSTN3-207ENST00000537408 AWAT2Q6E213 333 aa9.95□□□□□ -0.82
CLSTN3-207ENST00000537408 C22orf39Q6P5X5 142 aa9.95□□□□□ -0.82
CLSTN3-207ENST00000537408 GDPD4Q6W3E5 623 aa9.95□□□□□ -0.82
CLSTN3-207ENST00000537408 FCRLAQ7L513 359 aa9.95□□□□□ -0.82
CLSTN3-207ENST00000537408 CAMKMTQ7Z624 323 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms