RNA–Protein interactions for RNA: ENST00000537004.5

CLIP1-208, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 1 (best)

Gene CLIP1, Length 2,000 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-208ENST00000537004 GALEQ14376 348 aa10.7□□□□□ -0.7
CLIP1-208ENST00000537004 CDSNQ15517 529 aa10.7□□□□□ -0.7
CLIP1-208ENST00000537004 C22orf42Q6IC83 251 aa10.7□□□□□ -0.7
CLIP1-208ENST00000537004 POMZP3Q6PJE2 187 aa10.7□□□□□ -0.7
CLIP1-208ENST00000537004 NUP54Q7Z3B4 507 aa10.7□□□□□ -0.7
CLIP1-208ENST00000537004 CD163Q86VB7 1156 aa10.7□□□□□ -0.7
CLIP1-208ENST00000537004 SLC22A16Q86VW1 577 aa10.7□□□□□ -0.7
CLIP1-208ENST00000537004 KLBQ86Z14 1044 aa10.7□□□□□ -0.7
CLIP1-208ENST00000537004 RPRMLQ8N4K4 120 aa10.7□□□□□ -0.7
CLIP1-208ENST00000537004 DUSP19Q8WTR2 217 aa10.7□□□□□ -0.7
CLIP1-208ENST00000537004 TAAR8Q969N4 342 aa10.7□□□□□ -0.7
CLIP1-208ENST00000537004 RASD2Q96D21 266 aa10.7□□□□□ -0.7
CLIP1-208ENST00000537004 C1GALT1C1Q96EU7 318 aa10.7□□□□□ -0.7
CLIP1-208ENST00000537004 TIMP4Q99727 224 aa10.7□□□□□ -0.7
CLIP1-208ENST00000537004 TM9SF2Q99805 663 aa10.7□□□□□ -0.7
CLIP1-208ENST00000537004 PLSCR2Q9NRY7 297 aa10.7□□□□□ -0.7
CLIP1-208ENST00000537004 ABCA12Q86UK0 2595 aa10.69□□□□□ -0.7
CLIP1-208ENST00000537004 NPIPA2E9PIF3 369 aa10.69□□□□□ -0.7
CLIP1-208ENST00000537004 NPIPA3F8WFD2 350 aa10.69□□□□□ -0.7
CLIP1-208ENST00000537004 ACOT7O00154 380 aa10.69□□□□□ -0.7
CLIP1-208ENST00000537004 ADAM10O14672 748 aa10.69□□□□□ -0.7
CLIP1-208ENST00000537004 CELP19835 753 aa10.69□□□□□ -0.7
CLIP1-208ENST00000537004 UQCRC1P31930 480 aa10.69□□□□□ -0.7
CLIP1-208ENST00000537004 RPS5P46782 204 aaKnown RBP10.69□□□□□ -0.7
CLIP1-208ENST00000537004 ADORA2A-AS1P86434 159 aa10.69□□□□□ -0.7
CLIP1-208ENST00000537004 QPRTQ15274 297 aa10.69□□□□□ -0.7
CLIP1-208ENST00000537004 MAMDC2Q7Z304 686 aaPredicted RBP10.69□□□□□ -0.7
CLIP1-208ENST00000537004 NPEPL1Q8NDH3 523 aa10.69□□□□□ -0.7
CLIP1-208ENST00000537004 ATP6V1C2Q8NEY4 427 aa10.69□□□□□ -0.7
CLIP1-208ENST00000537004 OR5M9Q8NGP3 310 aa10.69□□□□□ -0.7
CLIP1-208ENST00000537004 GPR119Q8TDV5 335 aa10.69□□□□□ -0.7
CLIP1-208ENST00000537004 ITLN2Q8WWU7 325 aaPredicted RBP10.69□□□□□ -0.7
CLIP1-208ENST00000537004 SMPDL3BQ92485 455 aa10.69□□□□□ -0.7
CLIP1-208ENST00000537004 GNRHR2Q96P88 292 aa10.69□□□□□ -0.7
CLIP1-208ENST00000537004 NMNAT3Q96T66 252 aa10.69□□□□□ -0.7
CLIP1-208ENST00000537004 NUAK2Q9H093 628 aa10.69□□□□□ -0.7
CLIP1-208ENST00000537004 SIAEQ9HAT2 523 aa10.69□□□□□ -0.7
CLIP1-208ENST00000537004 GALNT9Q9HCQ5 603 aa10.69□□□□□ -0.7
CLIP1-208ENST00000537004 ZFP64Q9NPA5 681 aa10.69□□□□□ -0.7
CLIP1-208ENST00000537004 TEX13CA0A0J9YWL9 993 aa10.68□□□□□ -0.7
CLIP1-208ENST00000537004 FUOMA2VDF0 154 aa10.68□□□□□ -0.7
CLIP1-208ENST00000537004 OR6C68A6NDL8 312 aa10.68□□□□□ -0.7
CLIP1-208ENST00000537004 CD14P08571 375 aa10.68□□□□□ -0.7
CLIP1-208ENST00000537004 S100A5P33763 92 aa10.68□□□□□ -0.7
CLIP1-208ENST00000537004 CASP3P42574 277 aa10.68□□□□□ -0.7
CLIP1-208ENST00000537004 POLR2HP52434 150 aaKnown RBP10.68□□□□□ -0.7
CLIP1-208ENST00000537004 CASP6P55212 293 aa10.68□□□□□ -0.7
CLIP1-208ENST00000537004 PER3P56645 1201 aa10.68□□□□□ -0.7
CLIP1-208ENST00000537004 ACTC1P68032 377 aa10.68□□□□□ -0.7
CLIP1-208ENST00000537004 ACTA1P68133 377 aa10.68□□□□□ -0.7
CLIP1-208ENST00000537004 FABP5Q01469 135 aa10.68□□□□□ -0.7
CLIP1-208ENST00000537004 BDH1Q02338 343 aa10.68□□□□□ -0.7
CLIP1-208ENST00000537004 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.68□□□□□ -0.7
CLIP1-208ENST00000537004 ALG10Q5BKT4 473 aa10.68□□□□□ -0.7
CLIP1-208ENST00000537004 EMC4Q5J8M3 183 aa10.68□□□□□ -0.7
CLIP1-208ENST00000537004 ZNF787Q6DD87 383 aa10.68□□□□□ -0.7
CLIP1-208ENST00000537004 CD200R1LQ6Q8B3 271 aa10.68□□□□□ -0.7
CLIP1-208ENST00000537004 NANOGNBQ7Z5D8 188 aa10.68□□□□□ -0.7
CLIP1-208ENST00000537004 MRGPRGQ86SM5 289 aa10.68□□□□□ -0.7
CLIP1-208ENST00000537004 MISPQ8IVT2 679 aa10.68□□□□□ -0.7
CLIP1-208ENST00000537004 FAM109AQ8N4B1 249 aa10.68□□□□□ -0.7
CLIP1-208ENST00000537004 LRRC75AQ8NAA5 344 aa10.68□□□□□ -0.7
CLIP1-208ENST00000537004 OR51L1Q8NGJ5 315 aa10.68□□□□□ -0.7
CLIP1-208ENST00000537004 SMAP2Q8WU79 429 aaPredicted RBP10.68□□□□□ -0.7
CLIP1-208ENST00000537004 TMCO6Q96DC7 493 aa10.68□□□□□ -0.7
CLIP1-208ENST00000537004 ZMYND19Q96E35 227 aaPredicted RBP10.68□□□□□ -0.7
CLIP1-208ENST00000537004 DDOQ99489 341 aa10.68□□□□□ -0.7
CLIP1-208ENST00000537004 KCNS3Q9BQ31 491 aa10.68□□□□□ -0.7
CLIP1-208ENST00000537004 ZNF703Q9H7S9 590 aaPredicted RBP10.68□□□□□ -0.7
CLIP1-208ENST00000537004 FKRPQ9H9S5 495 aa10.68□□□□□ -0.7
CLIP1-208ENST00000537004 SNTG1Q9NSN8 517 aa10.68□□□□□ -0.7
CLIP1-208ENST00000537004 BABAM2Q9NXR7 383 aa10.68□□□□□ -0.7
CLIP1-208ENST00000537004 ZNF229Q9UJW7 825 aa10.68□□□□□ -0.7
CLIP1-208ENST00000537004 MEMO1Q9Y316 297 aa10.68□□□□□ -0.7
CLIP1-208ENST00000537004 PEX16Q9Y5Y5 336 aa10.68□□□□□ -0.7
CLIP1-208ENST00000537004 FREM3P0C091 2139 aa10.68□□□□□ -0.7
CLIP1-208ENST00000537004 MED12Q93074 2177 aa10.68□□□□□ -0.7
CLIP1-208ENST00000537004 TRAV36DV7A0A075B6V5 113 aa10.68□□□□□ -0.7
CLIP1-208ENST00000537004 TMED7-TICAM2A0A0A6YYA0 188 aa10.68□□□□□ -0.7
CLIP1-208ENST00000537004 PRRG2O14669 202 aa10.68□□□□□ -0.7
CLIP1-208ENST00000537004 TP53I11O14683 189 aa10.68□□□□□ -0.7
CLIP1-208ENST00000537004 SERPINI2O75830 405 aa10.68□□□□□ -0.7
CLIP1-208ENST00000537004 HIST1H2ABP04908 130 aa10.68□□□□□ -0.7
CLIP1-208ENST00000537004 FGF9P31371 208 aaPredicted RBP10.68□□□□□ -0.7
CLIP1-208ENST00000537004 RORCP51449 518 aa10.68□□□□□ -0.7
CLIP1-208ENST00000537004 BCAP31P51572 246 aa10.68□□□□□ -0.7
CLIP1-208ENST00000537004 RPL18Q07020 188 aaKnown RBP10.68□□□□□ -0.7
CLIP1-208ENST00000537004 LGALS3BPQ08380 585 aa10.68□□□□□ -0.7
CLIP1-208ENST00000537004 GGTLC2Q14390 218 aa10.68□□□□□ -0.7
CLIP1-208ENST00000537004 SLC10A1Q14973 349 aa10.68□□□□□ -0.7
CLIP1-208ENST00000537004 VASNQ6EMK4 673 aa10.68□□□□□ -0.7
CLIP1-208ENST00000537004 OR5M10Q6IEU7 315 aa10.68□□□□□ -0.7
CLIP1-208ENST00000537004 TRILQ7L0X0 811 aa10.68□□□□□ -0.7
CLIP1-208ENST00000537004 HIST3H2AQ7L7L0 130 aa10.68□□□□□ -0.7
CLIP1-208ENST00000537004 FAM122BQ7Z309 247 aa10.68□□□□□ -0.7
CLIP1-208ENST00000537004 POMGNT2Q8NAT1 580 aa10.68□□□□□ -0.7
CLIP1-208ENST00000537004 FAM57AQ8TBR7 257 aa10.68□□□□□ -0.7
CLIP1-208ENST00000537004 ZPLD1Q8TCW7 415 aa10.68□□□□□ -0.7
CLIP1-208ENST00000537004 HIST1H2ACQ93077 130 aa10.68□□□□□ -0.7
CLIP1-208ENST00000537004 HGDQ93099 445 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms