RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 TMEM5Q9Y2B1 443 aa15.59■□□□□ 0.09
TNFRSF1A-209ENST00000536717 CHD3Q12873 2000 aaKnown RBP15.59■□□□□ 0.09
TNFRSF1A-209ENST00000536717 RTTNQ86VV8 2226 aa15.58■□□□□ 0.09
TNFRSF1A-209ENST00000536717 A0A096LPE4 126 aa15.58■□□□□ 0.09
TNFRSF1A-209ENST00000536717 A0A1W2PPZ6 126 aa15.58■□□□□ 0.09
TNFRSF1A-209ENST00000536717 TRIM64A6NGJ6 449 aa15.58■□□□□ 0.09
TNFRSF1A-209ENST00000536717 TRIM64BA6NI03 449 aa15.58■□□□□ 0.09
TNFRSF1A-209ENST00000536717 AKAP8O43823 692 aaKnown RBP15.58■□□□□ 0.09
TNFRSF1A-209ENST00000536717 E2F6O75461 281 aa15.58■□□□□ 0.09
TNFRSF1A-209ENST00000536717 IFNGR2P38484 337 aa15.58■□□□□ 0.09
TNFRSF1A-209ENST00000536717 LIMS1P48059 325 aa15.58■□□□□ 0.09
TNFRSF1A-209ENST00000536717 SEC23BQ15437 767 aa15.58■□□□□ 0.09
TNFRSF1A-209ENST00000536717 BIVMQ86UB2 503 aa15.58■□□□□ 0.09
TNFRSF1A-209ENST00000536717 GPR137CQ8N3F9 429 aa15.58■□□□□ 0.09
TNFRSF1A-209ENST00000536717 LINC00471Q8N535 108 aa15.58■□□□□ 0.09
TNFRSF1A-209ENST00000536717 MAGEE2Q8TD90 523 aaPredicted RBP15.58■□□□□ 0.09
TNFRSF1A-209ENST00000536717 TXNDC15Q96J42 360 aa15.58■□□□□ 0.09
TNFRSF1A-209ENST00000536717 COX4I2Q96KJ9 171 aa15.58■□□□□ 0.09
TNFRSF1A-209ENST00000536717 BDH2Q9BUT1 245 aa15.58■□□□□ 0.09
TNFRSF1A-209ENST00000536717 GPR35Q9HC97 309 aa15.58■□□□□ 0.09
TNFRSF1A-209ENST00000536717 FAIMQ9NVQ4 179 aa15.58■□□□□ 0.09
TNFRSF1A-209ENST00000536717 ZNF229Q9UJW7 825 aa15.58■□□□□ 0.09
TNFRSF1A-209ENST00000536717 POU2F3Q9UKI9 436 aa15.58■□□□□ 0.09
TNFRSF1A-209ENST00000536717 ARPC4-TTLL3A0A0A6YYG9 625 aa15.58■□□□□ 0.08
TNFRSF1A-209ENST00000536717 SLC35F4A4IF30 521 aa15.58■□□□□ 0.08
TNFRSF1A-209ENST00000536717 H7C1Q1 480 aa15.58■□□□□ 0.08
TNFRSF1A-209ENST00000536717 OR10H3O60404 316 aa15.58■□□□□ 0.08
TNFRSF1A-209ENST00000536717 HIST1H2ABP04908 130 aa15.58■□□□□ 0.08
TNFRSF1A-209ENST00000536717 SAGP10523 405 aaPredicted RBP15.58■□□□□ 0.08
TNFRSF1A-209ENST00000536717 AHCYP23526 432 aa15.58■□□□□ 0.08
TNFRSF1A-209ENST00000536717 TTKP33981 857 aa15.58■□□□□ 0.08
TNFRSF1A-209ENST00000536717 ARHGDIAP52565 204 aa15.58■□□□□ 0.08
TNFRSF1A-209ENST00000536717 SH3BGRP55822 239 aaPredicted RBP15.58■□□□□ 0.08
TNFRSF1A-209ENST00000536717 LSM11P83369 360 aaKnown RBP eCLIP15.58■□□□□ 0.08
TNFRSF1A-209ENST00000536717 PPP1R8Q12972 351 aaKnown RBP15.58■□□□□ 0.08
TNFRSF1A-209ENST00000536717 ATP6AP1Q15904 470 aa15.58■□□□□ 0.08
TNFRSF1A-209ENST00000536717 CEACAM16Q2WEN9 425 aa15.58■□□□□ 0.08
TNFRSF1A-209ENST00000536717 ANKRD16Q6P6B7 361 aa15.58■□□□□ 0.08
TNFRSF1A-209ENST00000536717 HIST3H2AQ7L7L0 130 aa15.58■□□□□ 0.08
TNFRSF1A-209ENST00000536717 PXKQ7Z7A4 578 aa15.58■□□□□ 0.08
TNFRSF1A-209ENST00000536717 OR4C15Q8NGM1 316 aa15.58■□□□□ 0.08
TNFRSF1A-209ENST00000536717 HIST1H2ACQ93077 130 aa15.58■□□□□ 0.08
TNFRSF1A-209ENST00000536717 GTPBP3Q969Y2 492 aaKnown RBP15.58■□□□□ 0.08
TNFRSF1A-209ENST00000536717 DHRS9Q9BPW9 319 aa15.58■□□□□ 0.08
TNFRSF1A-209ENST00000536717 CRLF2Q9HC73 371 aa15.58■□□□□ 0.08
TNFRSF1A-209ENST00000536717 VNN3Q9NY84 501 aa15.58■□□□□ 0.08
TNFRSF1A-209ENST00000536717 NOX1Q9Y5S8 564 aa15.58■□□□□ 0.08
TNFRSF1A-209ENST00000536717 ABCA1O95477 2261 aa15.58■□□□□ 0.08
TNFRSF1A-209ENST00000536717 OR7A10O76100 309 aa15.57■□□□□ 0.08
TNFRSF1A-209ENST00000536717 CCNB2O95067 398 aa15.57■□□□□ 0.08
TNFRSF1A-209ENST00000536717 ADORA3P0DMS8 318 aa15.57■□□□□ 0.08
TNFRSF1A-209ENST00000536717 FUT1P19526 365 aa15.57■□□□□ 0.08
TNFRSF1A-209ENST00000536717 TUBA1BP68363 451 aa15.57■□□□□ 0.08
TNFRSF1A-209ENST00000536717 TUBA4AP68366 448 aa15.57■□□□□ 0.08
TNFRSF1A-209ENST00000536717 ARF1P84077 181 aaKnown RBP15.57■□□□□ 0.08
TNFRSF1A-209ENST00000536717 CARD17Q5XLA6 110 aa15.57■□□□□ 0.08
TNFRSF1A-209ENST00000536717 TUBA1AQ71U36 451 aa15.57■□□□□ 0.08
TNFRSF1A-209ENST00000536717 SLC46A3Q7Z3Q1 461 aa15.57■□□□□ 0.08
TNFRSF1A-209ENST00000536717 C20orf196Q8IYI0 205 aa15.57■□□□□ 0.08
TNFRSF1A-209ENST00000536717 DEPDC4Q8N2C3 294 aa15.57■□□□□ 0.08
TNFRSF1A-209ENST00000536717 LRRC17Q8N6Y2 441 aa15.57■□□□□ 0.08
TNFRSF1A-209ENST00000536717 TRMT61AQ96FX7 289 aaKnown RBP15.57■□□□□ 0.08
TNFRSF1A-209ENST00000536717 LRR1Q96L50 414 aa15.57■□□□□ 0.08
TNFRSF1A-209ENST00000536717 S100A14Q9HCY8 104 aa15.57■□□□□ 0.08
TNFRSF1A-209ENST00000536717 FN1P02751 2386 aaKnown RBP15.57■□□□□ 0.08
TNFRSF1A-209ENST00000536717 YLPM1P49750 1951 aaKnown RBP15.56■□□□□ 0.08
TNFRSF1A-209ENST00000536717 IGHV1-18A0A0C4DH31 117 aa15.56■□□□□ 0.08
TNFRSF1A-209ENST00000536717 EFCAB9A8MZ26 197 aa15.56■□□□□ 0.08
TNFRSF1A-209ENST00000536717 C11orf98E9PRG8 122 aa15.56■□□□□ 0.08
TNFRSF1A-209ENST00000536717 ATP6V1G2-DDX39BF2Z307 99 aa15.56■□□□□ 0.08
TNFRSF1A-209ENST00000536717 M0R3G1 203 aa15.56■□□□□ 0.08
TNFRSF1A-209ENST00000536717 NDUFS7O75251 213 aa15.56■□□□□ 0.08
TNFRSF1A-209ENST00000536717 SERPINI2O75830 405 aa15.56■□□□□ 0.08
TNFRSF1A-209ENST00000536717 OR6A2O95222 327 aa15.56■□□□□ 0.08
TNFRSF1A-209ENST00000536717 ASAH2BP0C7U1 165 aa15.56■□□□□ 0.08
TNFRSF1A-209ENST00000536717 GPR4P46093 362 aa15.56■□□□□ 0.08
TNFRSF1A-209ENST00000536717 UBE2NP61088 152 aaKnown RBP15.56■□□□□ 0.08
TNFRSF1A-209ENST00000536717 MICAQ29983 383 aa15.56■□□□□ 0.08
TNFRSF1A-209ENST00000536717 AGAP6Q5VW22 663 aa15.56■□□□□ 0.08
TNFRSF1A-209ENST00000536717 C11orf71Q6IPW1 123 aa15.56■□□□□ 0.08
TNFRSF1A-209ENST00000536717 TMPRSS11FQ6ZWK6 438 aa15.56■□□□□ 0.08
TNFRSF1A-209ENST00000536717 NANOGNBQ7Z5D8 188 aa15.56■□□□□ 0.08
TNFRSF1A-209ENST00000536717 LIPHQ8WWY8 451 aa15.56■□□□□ 0.08
TNFRSF1A-209ENST00000536717 LRTOMTQ8WZ04 291 aa15.56■□□□□ 0.08
TNFRSF1A-209ENST00000536717 FAM46AQ96IP4 442 aaKnown RBP15.56■□□□□ 0.08
TNFRSF1A-209ENST00000536717 SLC38A2Q96QD8 506 aa15.56■□□□□ 0.08
TNFRSF1A-209ENST00000536717 TAS2R5Q9NYW4 299 aa15.56■□□□□ 0.08
TNFRSF1A-209ENST00000536717 CRNNQ9UBG3 495 aaPredicted RBP15.56■□□□□ 0.08
TNFRSF1A-209ENST00000536717 ZNF503-AS2A6NEH8 195 aa15.55■□□□□ 0.08
TNFRSF1A-209ENST00000536717 ZNF99A8MXY4 864 aaPredicted RBP15.55■□□□□ 0.08
TNFRSF1A-209ENST00000536717 H3BNX3 289 aa15.55■□□□□ 0.08
TNFRSF1A-209ENST00000536717 IGHV4-39P01824 125 aa15.55■□□□□ 0.08
TNFRSF1A-209ENST00000536717 HOXB1P14653 301 aaPredicted RBP15.55■□□□□ 0.08
TNFRSF1A-209ENST00000536717 MAKP20794 623 aa15.55■□□□□ 0.08
TNFRSF1A-209ENST00000536717 OMPP47874 163 aa15.55■□□□□ 0.08
TNFRSF1A-209ENST00000536717 SLC9A3P48764 834 aa15.55■□□□□ 0.08
TNFRSF1A-209ENST00000536717 ZP4Q12836 540 aa15.55■□□□□ 0.08
TNFRSF1A-209ENST00000536717 CAMK2DQ13557 499 aa15.55■□□□□ 0.08
TNFRSF1A-209ENST00000536717 MUC15Q8N387 334 aa15.55■□□□□ 0.08
TNFRSF1A-209ENST00000536717 CBLN4Q9NTU7 201 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms