RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 EEF1AKMT1Q8WVE0 214 aa4.41□□□□□ -1.7
CLIP1-207ENST00000536634 PPWD1Q96BP3 646 aaKnown RBP4.41□□□□□ -1.7
CLIP1-207ENST00000536634 PGM2Q96G03 612 aa4.41□□□□□ -1.7
CLIP1-207ENST00000536634 ZNF486Q96H40 463 aaPredicted RBP4.41□□□□□ -1.7
CLIP1-207ENST00000536634 FAM210AQ96ND0 272 aa4.41□□□□□ -1.7
CLIP1-207ENST00000536634 TNFRSF13CQ96RJ3 184 aa4.41□□□□□ -1.7
CLIP1-207ENST00000536634 GAL3ST4Q96RP7 486 aa4.41□□□□□ -1.7
CLIP1-207ENST00000536634 KIFC1Q9BW19 673 aa4.41□□□□□ -1.7
CLIP1-207ENST00000536634 DGCR6LQ9BY27 220 aa4.41□□□□□ -1.7
CLIP1-207ENST00000536634 WWTR1Q9GZV5 400 aa4.41□□□□□ -1.7
CLIP1-207ENST00000536634 NOL11Q9H8H0 719 aaKnown RBP4.41□□□□□ -1.7
CLIP1-207ENST00000536634 PARVBQ9HBI1 364 aa4.41□□□□□ -1.7
CLIP1-207ENST00000536634 TEX10Q9NXF1 929 aaPredicted RBP4.41□□□□□ -1.7
CLIP1-207ENST00000536634 COPS7AQ9UBW8 275 aa4.41□□□□□ -1.7
CLIP1-207ENST00000536634 LIPT1Q9Y234 373 aa4.41□□□□□ -1.7
CLIP1-207ENST00000536634 DHRS7Q9Y394 339 aa4.41□□□□□ -1.7
CLIP1-207ENST00000536634 NOTCH3Q9UM47 2321 aa4.41□□□□□ -1.7
CLIP1-207ENST00000536634 A0A1W2PR80 420 aa4.4□□□□□ -1.71
CLIP1-207ENST00000536634 URADA6NGE7 173 aa4.4□□□□□ -1.71
CLIP1-207ENST00000536634 C15orf61A6NNL5 157 aa4.4□□□□□ -1.71
CLIP1-207ENST00000536634 B4DXG7 233 aa4.4□□□□□ -1.71
CLIP1-207ENST00000536634 H0YC42 278 aa4.4□□□□□ -1.71
CLIP1-207ENST00000536634 UBFD1O14562 309 aaKnown RBP4.4□□□□□ -1.71
CLIP1-207ENST00000536634 CDK2AP2O75956 126 aa4.4□□□□□ -1.71
CLIP1-207ENST00000536634 ACTL6AO96019 429 aa4.4□□□□□ -1.71
CLIP1-207ENST00000536634 IFNB1P01574 187 aa4.4□□□□□ -1.71
CLIP1-207ENST00000536634 CD8AP01732 235 aa4.4□□□□□ -1.71
CLIP1-207ENST00000536634 FDFT1P37268 417 aa4.4□□□□□ -1.71
CLIP1-207ENST00000536634 PTGDSP41222 190 aa4.4□□□□□ -1.71
CLIP1-207ENST00000536634 CASP3P42574 277 aa4.4□□□□□ -1.71
CLIP1-207ENST00000536634 SLC1A2P43004 574 aa4.4□□□□□ -1.71
CLIP1-207ENST00000536634 CLDN18P56856 261 aa4.4□□□□□ -1.71
CLIP1-207ENST00000536634 RWDD2BP57060 319 aa4.4□□□□□ -1.71
CLIP1-207ENST00000536634 HERVK_113P63132 956 aa4.4□□□□□ -1.71
CLIP1-207ENST00000536634 ERVK-8P63133 956 aa4.4□□□□□ -1.71
CLIP1-207ENST00000536634 DEFA6Q01524 100 aa4.4□□□□□ -1.71
CLIP1-207ENST00000536634 GABPB1Q06547 395 aaPredicted RBP4.4□□□□□ -1.71
CLIP1-207ENST00000536634 LOXL1Q08397 574 aaPredicted RBP4.4□□□□□ -1.71
CLIP1-207ENST00000536634 FUT7Q11130 342 aa4.4□□□□□ -1.71
CLIP1-207ENST00000536634 EXOC3L2Q2M3D2 409 aa4.4□□□□□ -1.71
CLIP1-207ENST00000536634 VWC2Q2TAL6 325 aa4.4□□□□□ -1.71
CLIP1-207ENST00000536634 PGGHGQ32M88 737 aa4.4□□□□□ -1.71
CLIP1-207ENST00000536634 SNAI3Q3KNW1 292 aa4.4□□□□□ -1.71
CLIP1-207ENST00000536634 FAM120AOSQ5T036 256 aa4.4□□□□□ -1.71
CLIP1-207ENST00000536634 TIGD3Q6B0B8 471 aa4.4□□□□□ -1.71
CLIP1-207ENST00000536634 NEPROQ6NW34 567 aa4.4□□□□□ -1.71
CLIP1-207ENST00000536634 ANGPTL8Q6UXH0 198 aa4.4□□□□□ -1.71
CLIP1-207ENST00000536634 DND1Q8IYX4 353 aaKnown RBP4.4□□□□□ -1.71
CLIP1-207ENST00000536634 PRR22Q8IZ63 422 aa4.4□□□□□ -1.71
CLIP1-207ENST00000536634 TRPV3Q8NET8 790 aa4.4□□□□□ -1.71
CLIP1-207ENST00000536634 RDH11Q8TC12 318 aa4.4□□□□□ -1.71
CLIP1-207ENST00000536634 CCDC42Q96M95 316 aa4.4□□□□□ -1.71
CLIP1-207ENST00000536634 KRT12Q99456 494 aa4.4□□□□□ -1.71
CLIP1-207ENST00000536634 NDNQ99608 321 aa4.4□□□□□ -1.71
CLIP1-207ENST00000536634 MAPKAP1Q9BPZ7 522 aa4.4□□□□□ -1.71
CLIP1-207ENST00000536634 ERVK-6Q9BXR3 956 aa4.4□□□□□ -1.71
CLIP1-207ENST00000536634 IL22Q9GZX6 179 aa4.4□□□□□ -1.71
CLIP1-207ENST00000536634 NAT10Q9H0A0 1025 aaKnown RBP4.4□□□□□ -1.71
CLIP1-207ENST00000536634 Q9H8V8 135 aa4.4□□□□□ -1.71
CLIP1-207ENST00000536634 PPANQ9NQ55 473 aaKnown RBP4.4□□□□□ -1.71
CLIP1-207ENST00000536634 IFNKQ9P0W0 207 aa4.4□□□□□ -1.71
CLIP1-207ENST00000536634 FETUBQ9UGM5 382 aa4.4□□□□□ -1.71
CLIP1-207ENST00000536634 IKZF3Q9UKT9 509 aa4.4□□□□□ -1.71
CLIP1-207ENST00000536634 ERVK-19Q9WJR5 959 aa4.4□□□□□ -1.71
CLIP1-207ENST00000536634 WDR83OSQ9Y284 106 aa4.4□□□□□ -1.71
CLIP1-207ENST00000536634 MRPS33Q9Y291 106 aaKnown RBP4.4□□□□□ -1.71
CLIP1-207ENST00000536634 DNAH3Q8TD57 4116 aa4.4□□□□□ -1.71
CLIP1-207ENST00000536634 PCNX3Q9H6A9 2034 aa4.39□□□□□ -1.71
CLIP1-207ENST00000536634 SLC22A20A6NK97 555 aa4.39□□□□□ -1.71
CLIP1-207ENST00000536634 WASHC1A8K0Z3 465 aa4.39□□□□□ -1.71
CLIP1-207ENST00000536634 C17orf51A8MQB3 221 aa4.39□□□□□ -1.71
CLIP1-207ENST00000536634 BTNL10A8MVZ5 291 aa4.39□□□□□ -1.71
CLIP1-207ENST00000536634 RTCAO00442 366 aaKnown RBP4.39□□□□□ -1.71
CLIP1-207ENST00000536634 ARPC2O15144 300 aa4.39□□□□□ -1.71
CLIP1-207ENST00000536634 CLOCKO15516 846 aa4.39□□□□□ -1.71
CLIP1-207ENST00000536634 ZNF189O75820 626 aaPredicted RBP4.39□□□□□ -1.71
CLIP1-207ENST00000536634 SNX4O95219 450 aa4.39□□□□□ -1.71
CLIP1-207ENST00000536634 GUCA1CO95843 209 aa4.39□□□□□ -1.71
CLIP1-207ENST00000536634 C8GP07360 202 aa4.39□□□□□ -1.71
CLIP1-207ENST00000536634 ZNF708P17019 499 aa4.39□□□□□ -1.71
CLIP1-207ENST00000536634 PTNP21246 168 aa4.39□□□□□ -1.71
CLIP1-207ENST00000536634 TBXA2RP21731 343 aa4.39□□□□□ -1.71
CLIP1-207ENST00000536634 MAGEA1P43355 309 aa4.39□□□□□ -1.71
CLIP1-207ENST00000536634 CDKN2DP55273 166 aa4.39□□□□□ -1.71
CLIP1-207ENST00000536634 CLDN15P56746 228 aa4.39□□□□□ -1.71
CLIP1-207ENST00000536634 STXBP1P61764 594 aaKnown RBP4.39□□□□□ -1.71
CLIP1-207ENST00000536634 IGLV3-21P80748 117 aaPredicted RBP4.39□□□□□ -1.71
CLIP1-207ENST00000536634 SERTAD2Q14140 314 aa4.39□□□□□ -1.71
CLIP1-207ENST00000536634 EFTUD2Q15029 972 aaKnown RBP eCLIP4.39□□□□□ -1.71
CLIP1-207ENST00000536634 GUSBP1Q15486 140 aa4.39□□□□□ -1.71
CLIP1-207ENST00000536634 ADPRMQ3LIE5 342 aa4.39□□□□□ -1.71
CLIP1-207ENST00000536634 KBTBD12Q3ZCT8 623 aa4.39□□□□□ -1.71
CLIP1-207ENST00000536634 LCN1P1Q5VSP4 162 aa4.39□□□□□ -1.71
CLIP1-207ENST00000536634 DUPD1Q68J44 220 aa4.39□□□□□ -1.71
CLIP1-207ENST00000536634 STAC2Q6ZMT1 411 aa4.39□□□□□ -1.71
CLIP1-207ENST00000536634 P4HA3Q7Z4N8 544 aa4.39□□□□□ -1.71
CLIP1-207ENST00000536634 LUZP1Q86V48 1076 aa4.39□□□□□ -1.71
CLIP1-207ENST00000536634 THOC6Q86W42 341 aaKnown RBP4.39□□□□□ -1.71
CLIP1-207ENST00000536634 TBC1D19Q8N5T2 526 aa4.39□□□□□ -1.71
CLIP1-207ENST00000536634 ZNF525Q8N782 197 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms