RNA–Protein interactions for RNA: ENST00000536194.1

TNFRSF1A-208, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-208ENST00000536194 TP53P04637 393 aaPredicted RBP9.88□□□□□ -0.83
TNFRSF1A-208ENST00000536194 B4GALT1P15291 398 aa9.88□□□□□ -0.83
TNFRSF1A-208ENST00000536194 RPL4P36578 427 aaKnown RBP9.88□□□□□ -0.83
TNFRSF1A-208ENST00000536194 ACVR1BP36896 505 aa9.88□□□□□ -0.83
TNFRSF1A-208ENST00000536194 IFNGR2P38484 337 aa9.88□□□□□ -0.83
TNFRSF1A-208ENST00000536194 LCN6P62502 163 aa9.88□□□□□ -0.83
TNFRSF1A-208ENST00000536194 SPOCK1Q08629 439 aa9.88□□□□□ -0.83
TNFRSF1A-208ENST00000536194 SLC25A47Q6Q0C1 308 aa9.88□□□□□ -0.83
TNFRSF1A-208ENST00000536194 SMARCD3Q6STE5 483 aa9.88□□□□□ -0.83
TNFRSF1A-208ENST00000536194 HDDC2Q7Z4H3 204 aa9.88□□□□□ -0.83
TNFRSF1A-208ENST00000536194 MYPOPQ86VE0 399 aaPredicted RBP9.88□□□□□ -0.83
TNFRSF1A-208ENST00000536194 LILRB1Q8NHL6 650 aaPredicted RBP9.88□□□□□ -0.83
TNFRSF1A-208ENST00000536194 FANK1Q8TC84 345 aa9.88□□□□□ -0.83
TNFRSF1A-208ENST00000536194 RASD2Q96D21 266 aa9.88□□□□□ -0.83
TNFRSF1A-208ENST00000536194 DUS3LQ96G46 650 aaKnown RBP9.88□□□□□ -0.83
TNFRSF1A-208ENST00000536194 SAMD8Q96LT4 415 aa9.88□□□□□ -0.83
TNFRSF1A-208ENST00000536194 PLA2G12AQ9BZM1 189 aa9.88□□□□□ -0.83
TNFRSF1A-208ENST00000536194 EGLN3Q9H6Z9 239 aa9.88□□□□□ -0.83
TNFRSF1A-208ENST00000536194 SEC61A2Q9H9S3 476 aa9.88□□□□□ -0.83
TNFRSF1A-208ENST00000536194 NTN4Q9HB63 628 aa9.88□□□□□ -0.83
TNFRSF1A-208ENST00000536194 NOX3Q9HBY0 568 aa9.88□□□□□ -0.83
TNFRSF1A-208ENST00000536194 OBP2BQ9NPH6 170 aa9.88□□□□□ -0.83
TNFRSF1A-208ENST00000536194 TMEM38BQ9NVV0 291 aa9.88□□□□□ -0.83
TNFRSF1A-208ENST00000536194 UGT2A1Q9Y4X1 527 aa9.88□□□□□ -0.83
TNFRSF1A-208ENST00000536194 PDZD2O15018 2839 aa9.88□□□□□ -0.83
TNFRSF1A-208ENST00000536194 CADP27708 2225 aa9.88□□□□□ -0.83
TNFRSF1A-208ENST00000536194 CENPEQ02224 2701 aa9.88□□□□□ -0.83
TNFRSF1A-208ENST00000536194 ABCA12Q86UK0 2595 aa9.87□□□□□ -0.83
TNFRSF1A-208ENST00000536194 TEX13CA0A0J9YWL9 993 aa9.87□□□□□ -0.83
TNFRSF1A-208ENST00000536194 SHISA9B4DS77 424 aa9.87□□□□□ -0.83
TNFRSF1A-208ENST00000536194 M0R1B8 84 aa9.87□□□□□ -0.83
TNFRSF1A-208ENST00000536194 PPP1R3DO95685 299 aa9.87□□□□□ -0.83
TNFRSF1A-208ENST00000536194 TXNDC12O95881 172 aa9.87□□□□□ -0.83
TNFRSF1A-208ENST00000536194 IGFBP1P08833 259 aaPredicted RBP9.87□□□□□ -0.83
TNFRSF1A-208ENST00000536194 HOXB6P17509 224 aaKnown RBP9.87□□□□□ -0.83
TNFRSF1A-208ENST00000536194 SDHAP31040 664 aa9.87□□□□□ -0.83
TNFRSF1A-208ENST00000536194 HOXC12P31275 282 aa9.87□□□□□ -0.83
TNFRSF1A-208ENST00000536194 NR1H2P55055 460 aa9.87□□□□□ -0.83
TNFRSF1A-208ENST00000536194 CD47Q08722 323 aa9.87□□□□□ -0.83
TNFRSF1A-208ENST00000536194 KRR1Q13601 381 aaKnown RBP9.87□□□□□ -0.83
TNFRSF1A-208ENST00000536194 RFX4Q33E94 735 aa9.87□□□□□ -0.83
TNFRSF1A-208ENST00000536194 C10orf128Q5T292 105 aa9.87□□□□□ -0.83
TNFRSF1A-208ENST00000536194 FAM205BPQ63HN1 556 aa9.87□□□□□ -0.83
TNFRSF1A-208ENST00000536194 ADAM5Q6NVV9 412 aa9.87□□□□□ -0.83
TNFRSF1A-208ENST00000536194 ZNF813Q6ZN06 617 aa9.87□□□□□ -0.83
TNFRSF1A-208ENST00000536194 DPY19L2P2Q6ZN68 376 aa9.87□□□□□ -0.83
TNFRSF1A-208ENST00000536194 ZNF704Q6ZNC4 412 aaPredicted RBP9.87□□□□□ -0.83
TNFRSF1A-208ENST00000536194 PTCHD4Q6ZW05 846 aa9.87□□□□□ -0.83
TNFRSF1A-208ENST00000536194 LINC00471Q8N535 108 aa9.87□□□□□ -0.83
TNFRSF1A-208ENST00000536194 KBTBD8Q8NFY9 601 aa9.87□□□□□ -0.83
TNFRSF1A-208ENST00000536194 OR10G2Q8NGC3 310 aa9.87□□□□□ -0.83
TNFRSF1A-208ENST00000536194 OR8D4Q8NGM9 314 aa9.87□□□□□ -0.83
TNFRSF1A-208ENST00000536194 FGFBP3Q8TAT2 258 aa9.87□□□□□ -0.83
TNFRSF1A-208ENST00000536194 NEUROG1Q92886 237 aa9.87□□□□□ -0.83
TNFRSF1A-208ENST00000536194 GTPBP3Q969Y2 492 aaKnown RBP9.87□□□□□ -0.83
TNFRSF1A-208ENST00000536194 ZNF75AQ96N20 296 aa9.87□□□□□ -0.83
TNFRSF1A-208ENST00000536194 ZNF570Q96NI8 536 aa9.87□□□□□ -0.83
TNFRSF1A-208ENST00000536194 NIPSNAP1Q9BPW8 284 aa9.87□□□□□ -0.83
TNFRSF1A-208ENST00000536194 ALG12Q9BV10 488 aa9.87□□□□□ -0.83
TNFRSF1A-208ENST00000536194 DGCR6LQ9BY27 220 aa9.87□□□□□ -0.83
TNFRSF1A-208ENST00000536194 ESRP2Q9H6T0 727 aaKnown RBP9.87□□□□□ -0.83
TNFRSF1A-208ENST00000536194 NGBQ9NPG2 151 aa9.87□□□□□ -0.83
TNFRSF1A-208ENST00000536194 B3GNT2Q9NY97 397 aa9.87□□□□□ -0.83
TNFRSF1A-208ENST00000536194 STX18Q9P2W9 335 aaKnown RBP9.87□□□□□ -0.83
TNFRSF1A-208ENST00000536194 CRNNQ9UBG3 495 aaPredicted RBP9.87□□□□□ -0.83
TNFRSF1A-208ENST00000536194 GRHPRQ9UBQ7 328 aa9.87□□□□□ -0.83
TNFRSF1A-208ENST00000536194 POFUT2Q9Y2G5 429 aa9.87□□□□□ -0.83
TNFRSF1A-208ENST00000536194 IER3IP1Q9Y5U9 82 aa9.87□□□□□ -0.83
TNFRSF1A-208ENST00000536194 MAGED1Q9Y5V3 778 aaPredicted RBP9.87□□□□□ -0.83
TNFRSF1A-208ENST00000536194 IGHV1-18A0A0C4DH31 117 aa9.86□□□□□ -0.83
TNFRSF1A-208ENST00000536194 ARRDC5A6NEK1 342 aa9.86□□□□□ -0.83
TNFRSF1A-208ENST00000536194 A6NIZ1 184 aa9.86□□□□□ -0.83
TNFRSF1A-208ENST00000536194 SOCS2O14508 198 aa9.86□□□□□ -0.83
TNFRSF1A-208ENST00000536194 ABCD4O14678 606 aa9.86□□□□□ -0.83
TNFRSF1A-208ENST00000536194 ARHGEF9O43307 516 aa9.86□□□□□ -0.83
TNFRSF1A-208ENST00000536194 DSCAMO60469 2012 aa9.86□□□□□ -0.83
TNFRSF1A-208ENST00000536194 CIB2O75838 187 aa9.86□□□□□ -0.83
TNFRSF1A-208ENST00000536194 WNT11O96014 354 aa9.86□□□□□ -0.83
TNFRSF1A-208ENST00000536194 IGLV1-44P01699 117 aa9.86□□□□□ -0.83
TNFRSF1A-208ENST00000536194 HLA-HP01893 362 aa9.86□□□□□ -0.83
TNFRSF1A-208ENST00000536194 CELA3BP08861 270 aa9.86□□□□□ -0.83
TNFRSF1A-208ENST00000536194 APEHP13798 732 aaKnown RBP9.86□□□□□ -0.83
TNFRSF1A-208ENST00000536194 HOXB1P14653 301 aaPredicted RBP9.86□□□□□ -0.83
TNFRSF1A-208ENST00000536194 PRKACGP22612 351 aa9.86□□□□□ -0.83
TNFRSF1A-208ENST00000536194 CD40P25942 277 aa9.86□□□□□ -0.83
TNFRSF1A-208ENST00000536194 CDAP32320 146 aa9.86□□□□□ -0.83
TNFRSF1A-208ENST00000536194 UBE2NP61088 152 aaKnown RBP9.86□□□□□ -0.83
TNFRSF1A-208ENST00000536194 RAP1BP61224 184 aa9.86□□□□□ -0.83
TNFRSF1A-208ENST00000536194 RAP1AP62834 184 aa9.86□□□□□ -0.83
TNFRSF1A-208ENST00000536194 DBPQ10586 325 aaPredicted RBP9.86□□□□□ -0.83
TNFRSF1A-208ENST00000536194 GK3PQ14409 553 aa9.86□□□□□ -0.83
TNFRSF1A-208ENST00000536194 KPNB1Q14974 876 aaKnown RBP9.86□□□□□ -0.83
TNFRSF1A-208ENST00000536194 ETFDHQ16134 617 aa9.86□□□□□ -0.83
TNFRSF1A-208ENST00000536194 C1QTNF12Q5T7M4 302 aa9.86□□□□□ -0.83
TNFRSF1A-208ENST00000536194 RASSF6Q6ZTQ3 369 aa9.86□□□□□ -0.83
TNFRSF1A-208ENST00000536194 SSX8Q7RTT4 187 aa9.86□□□□□ -0.83
TNFRSF1A-208ENST00000536194 MDP1Q86V88 176 aa9.86□□□□□ -0.83
TNFRSF1A-208ENST00000536194 SKA3Q8IX90 412 aa9.86□□□□□ -0.83
TNFRSF1A-208ENST00000536194 SLC22A24Q8N4F4 322 aa9.86□□□□□ -0.83
TNFRSF1A-208ENST00000536194 GIPC3Q8TF64 312 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms