RNA–Protein interactions for RNA: ENST00000535897.1

CHFR-211, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-211ENST00000535897 IQCMA0A1B0GVH7 501 aa6.83□□□□□ -1.32
CHFR-211ENST00000535897 LRRN3E7EW58 273 aa6.83□□□□□ -1.32
CHFR-211ENST00000535897 BIRC5O15392 142 aa6.83□□□□□ -1.32
CHFR-211ENST00000535897 FZD7O75084 574 aa6.83□□□□□ -1.32
CHFR-211ENST00000535897 FOXH1O75593 365 aa6.83□□□□□ -1.32
CHFR-211ENST00000535897 SLC22A3O75751 556 aa6.83□□□□□ -1.32
CHFR-211ENST00000535897 FSHBP01225 129 aa6.83□□□□□ -1.32
CHFR-211ENST00000535897 PTHP01270 115 aa6.83□□□□□ -1.32
CHFR-211ENST00000535897 NUDT7P0C024 238 aa6.83□□□□□ -1.32
CHFR-211ENST00000535897 ZNF250P15622 560 aa6.83□□□□□ -1.32
CHFR-211ENST00000535897 MAKP20794 623 aa6.83□□□□□ -1.32
CHFR-211ENST00000535897 BGNP21810 368 aa6.83□□□□□ -1.32
CHFR-211ENST00000535897 EPHA3P29320 983 aa6.83□□□□□ -1.32
CHFR-211ENST00000535897 GCH1P30793 250 aa6.83□□□□□ -1.32
CHFR-211ENST00000535897 PCGF2P35227 344 aa6.83□□□□□ -1.32
CHFR-211ENST00000535897 RGS8P57771 180 aaPredicted RBP6.83□□□□□ -1.32
CHFR-211ENST00000535897 STX3Q13277 289 aa6.83□□□□□ -1.32
CHFR-211ENST00000535897 SLC36A2Q495M3 483 aa6.83□□□□□ -1.32
CHFR-211ENST00000535897 GTDC1Q4AE62 458 aa6.83□□□□□ -1.32
CHFR-211ENST00000535897 DOK3Q7L591 496 aa6.83□□□□□ -1.32
CHFR-211ENST00000535897 SLC16A14Q7RTX9 510 aa6.83□□□□□ -1.32
CHFR-211ENST00000535897 PXKQ7Z7A4 578 aa6.83□□□□□ -1.32
CHFR-211ENST00000535897 KRT73Q86Y46 540 aa6.83□□□□□ -1.32
CHFR-211ENST00000535897 LSMEM1Q8N8F7 131 aa6.83□□□□□ -1.32
CHFR-211ENST00000535897 CPEB3Q8NE35 698 aaKnown RBP6.83□□□□□ -1.32
CHFR-211ENST00000535897 OR4K5Q8NGD3 323 aa6.83□□□□□ -1.32
CHFR-211ENST00000535897 OR1J2Q8NGS2 313 aa6.83□□□□□ -1.32
CHFR-211ENST00000535897 OR1J1Q8NGS3 322 aa6.83□□□□□ -1.32
CHFR-211ENST00000535897 FGFBP3Q8TAT2 258 aa6.83□□□□□ -1.32
CHFR-211ENST00000535897 ZNF566Q969W8 418 aa6.83□□□□□ -1.32
CHFR-211ENST00000535897 SLC41A3Q96GZ6 507 aa6.83□□□□□ -1.32
CHFR-211ENST00000535897 ITCHQ96J02 903 aa6.83□□□□□ -1.32
CHFR-211ENST00000535897 SORT1Q99523 831 aa6.83□□□□□ -1.32
CHFR-211ENST00000535897 PAIP2Q9BPZ3 127 aaKnown RBP6.83□□□□□ -1.32
CHFR-211ENST00000535897 BCL2L14Q9BZR8 327 aa6.83□□□□□ -1.32
CHFR-211ENST00000535897 EGLN1Q9GZT9 426 aa6.83□□□□□ -1.32
CHFR-211ENST00000535897 WDR55Q9H6Y2 383 aaPredicted RBP6.83□□□□□ -1.32
CHFR-211ENST00000535897 TMEM27Q9HBJ8 222 aa6.83□□□□□ -1.32
CHFR-211ENST00000535897 TMEM38BQ9NVV0 291 aa6.83□□□□□ -1.32
CHFR-211ENST00000535897 MRPL39Q9NYK5 338 aaKnown RBP6.83□□□□□ -1.32
CHFR-211ENST00000535897 NKIRAS2Q9NYR9 191 aa6.83□□□□□ -1.32
CHFR-211ENST00000535897 GLTPQ9NZD2 209 aa6.83□□□□□ -1.32
CHFR-211ENST00000535897 ZNF69Q9UC07 566 aa6.83□□□□□ -1.32
CHFR-211ENST00000535897 TESQ9UGI8 421 aaKnown RBP6.83□□□□□ -1.32
CHFR-211ENST00000535897 NUP50Q9UKX7 468 aa6.83□□□□□ -1.32
CHFR-211ENST00000535897 GPR45Q9Y5Y3 372 aa6.83□□□□□ -1.32
CHFR-211ENST00000535897 POM121CA8CG34 1229 aa6.82□□□□□ -1.32
CHFR-211ENST00000535897 PLPP3O14495 311 aa6.82□□□□□ -1.32
CHFR-211ENST00000535897 SDHDO14521 159 aa6.82□□□□□ -1.32
CHFR-211ENST00000535897 RNF13O43567 381 aa6.82□□□□□ -1.32
CHFR-211ENST00000535897 ZNF500O60304 480 aaPredicted RBP6.82□□□□□ -1.32
CHFR-211ENST00000535897 SNAP29O95721 258 aa6.82□□□□□ -1.32
CHFR-211ENST00000535897 BGLAPP02818 100 aa6.82□□□□□ -1.32
CHFR-211ENST00000535897 ZCCHC18P0CG32 403 aa6.82□□□□□ -1.32
CHFR-211ENST00000535897 IDO1P14902 403 aa6.82□□□□□ -1.32
CHFR-211ENST00000535897 PRKAR1BP31321 381 aa6.82□□□□□ -1.32
CHFR-211ENST00000535897 APLNRP35414 380 aa6.82□□□□□ -1.32
CHFR-211ENST00000535897 UCP2P55851 309 aa6.82□□□□□ -1.32
CHFR-211ENST00000535897 IL13RA1P78552 427 aa6.82□□□□□ -1.32
CHFR-211ENST00000535897 HSF2Q03933 536 aa6.82□□□□□ -1.32
CHFR-211ENST00000535897 SLC3A1Q07837 685 aa6.82□□□□□ -1.32
CHFR-211ENST00000535897 RGNQ15493 299 aa6.82□□□□□ -1.32
CHFR-211ENST00000535897 KRT71Q3SY84 523 aa6.82□□□□□ -1.32
CHFR-211ENST00000535897 FAM209AQ5JX71 171 aa6.82□□□□□ -1.32
CHFR-211ENST00000535897 SPATA46Q5T0L3 261 aa6.82□□□□□ -1.32
CHFR-211ENST00000535897 FAM91A1Q658Y4 838 aa6.82□□□□□ -1.32
CHFR-211ENST00000535897 LEG1Q6P5S2 330 aa6.82□□□□□ -1.32
CHFR-211ENST00000535897 WDR88Q6ZMY6 472 aa6.82□□□□□ -1.32
CHFR-211ENST00000535897 SLC35D2Q76EJ3 337 aa6.82□□□□□ -1.32
CHFR-211ENST00000535897 DPPA2Q7Z7J5 298 aa6.82□□□□□ -1.32
CHFR-211ENST00000535897 RANBP3LQ86VV4 465 aaPredicted RBP6.82□□□□□ -1.32
CHFR-211ENST00000535897 BCL6BQ8N143 479 aaPredicted RBP6.82□□□□□ -1.32
CHFR-211ENST00000535897 LRRC18Q8N456 261 aa6.82□□□□□ -1.32
CHFR-211ENST00000535897 RBM15BQ8NDT2 890 aaKnown RBP6.82□□□□□ -1.32
CHFR-211ENST00000535897 OR6S1Q8NH40 331 aa6.82□□□□□ -1.32
CHFR-211ENST00000535897 NFKBIDQ8NI38 313 aa6.82□□□□□ -1.32
CHFR-211ENST00000535897 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.82□□□□□ -1.32
CHFR-211ENST00000535897 TAF15Q92804 592 aaKnown RBP eCLIP6.82□□□□□ -1.32
CHFR-211ENST00000535897 DVL3Q92997 716 aaPredicted RBP6.82□□□□□ -1.32
CHFR-211ENST00000535897 POP5Q969H6 163 aaKnown RBP6.82□□□□□ -1.32
CHFR-211ENST00000535897 LRRC58Q96CX6 371 aa6.82□□□□□ -1.32
CHFR-211ENST00000535897 DCLRE1CQ96SD1 692 aaKnown RBP6.82□□□□□ -1.32
CHFR-211ENST00000535897 MRI1Q9BV20 369 aa6.82□□□□□ -1.32
CHFR-211ENST00000535897 SPATA5L1Q9BVQ7 753 aa6.82□□□□□ -1.32
CHFR-211ENST00000535897 ROPN1BQ9BZX4 212 aaPredicted RBP6.82□□□□□ -1.32
CHFR-211ENST00000535897 MS4A7Q9GZW8 240 aaPredicted RBP6.82□□□□□ -1.32
CHFR-211ENST00000535897 RAD21L1Q9H4I0 556 aa6.82□□□□□ -1.32
CHFR-211ENST00000535897 ROPN1Q9HAT0 212 aaPredicted RBP6.82□□□□□ -1.32
CHFR-211ENST00000535897 BCL2L10Q9HD36 194 aa6.82□□□□□ -1.32
CHFR-211ENST00000535897 A4GALTQ9NPC4 353 aa6.82□□□□□ -1.32
CHFR-211ENST00000535897 PLEK2Q9NYT0 353 aa6.82□□□□□ -1.32
CHFR-211ENST00000535897 LEF1Q9UJU2 399 aaPredicted RBP6.82□□□□□ -1.32
CHFR-211ENST00000535897 PURGQ9UJV8 347 aaKnown RBP6.82□□□□□ -1.32
CHFR-211ENST00000535897 AUP1Q9Y679 476 aa6.82□□□□□ -1.32
CHFR-211ENST00000535897 PRKDCP78527 4128 aaKnown RBP6.82□□□□□ -1.32
CHFR-211ENST00000535897 IGHV3OR16-10A0A075B7F0 116 aa6.81□□□□□ -1.32
CHFR-211ENST00000535897 TRPC5OSA6NMA1 111 aa6.81□□□□□ -1.32
CHFR-211ENST00000535897 CLIC1O00299 241 aa6.81□□□□□ -1.32
CHFR-211ENST00000535897 DHHO43323 396 aa6.81□□□□□ -1.32
CHFR-211ENST00000535897 MT-ATP6P00846 226 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms