RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 CLDN22Q8N7P3 220 aa10.59□□□□□ -0.71
CHD4-203ENST00000535717 C1orf162Q8NEQ5 155 aaPredicted RBP10.59□□□□□ -0.71
CHD4-203ENST00000535717 NOXO1Q8NFA2 376 aa10.59□□□□□ -0.71
CHD4-203ENST00000535717 OR8D4Q8NGM9 314 aa10.59□□□□□ -0.71
CHD4-203ENST00000535717 OR1K1Q8NGR3 316 aa10.59□□□□□ -0.71
CHD4-203ENST00000535717 OR5K1Q8NHB7 308 aa10.59□□□□□ -0.71
CHD4-203ENST00000535717 BCL2L2Q92843 193 aaPredicted RBP10.59□□□□□ -0.71
CHD4-203ENST00000535717 MARVELD3Q96A59 401 aa10.59□□□□□ -0.71
CHD4-203ENST00000535717 RASD2Q96D21 266 aa10.59□□□□□ -0.71
CHD4-203ENST00000535717 NMD3Q96D46 503 aaKnown RBP10.59□□□□□ -0.71
CHD4-203ENST00000535717 CENPNQ96H22 339 aaPredicted RBP10.59□□□□□ -0.71
CHD4-203ENST00000535717 ZC3HAV1LQ96H79 300 aaKnown RBP10.59□□□□□ -0.71
CHD4-203ENST00000535717 ZNF570Q96NI8 536 aa10.59□□□□□ -0.71
CHD4-203ENST00000535717 PKP2Q99959 881 aa10.59□□□□□ -0.71
CHD4-203ENST00000535717 PLA2G12AQ9BZM1 189 aa10.59□□□□□ -0.71
CHD4-203ENST00000535717 ULBP2Q9BZM5 246 aa10.59□□□□□ -0.71
CHD4-203ENST00000535717 SEMA6AQ9H2E6 1030 aa10.59□□□□□ -0.71
CHD4-203ENST00000535717 SLC24A3Q9HC58 644 aa10.59□□□□□ -0.71
CHD4-203ENST00000535717 S100A14Q9HCY8 104 aa10.59□□□□□ -0.71
CHD4-203ENST00000535717 IL20Q9NYY1 176 aa10.59□□□□□ -0.71
CHD4-203ENST00000535717 STX18Q9P2W9 335 aaKnown RBP10.59□□□□□ -0.71
CHD4-203ENST00000535717 REV1Q9UBZ9 1251 aa10.59□□□□□ -0.71
CHD4-203ENST00000535717 KCNN3Q9UGI6 736 aa10.59□□□□□ -0.71
CHD4-203ENST00000535717 APCP25054 2843 aa10.59□□□□□ -0.71
CHD4-203ENST00000535717 LRBAP50851 2863 aa10.58□□□□□ -0.72
CHD4-203ENST00000535717 TEX13CA0A0J9YWL9 993 aa10.58□□□□□ -0.72
CHD4-203ENST00000535717 G3V2T6 193 aa10.58□□□□□ -0.72
CHD4-203ENST00000535717 ARHGEF9O43307 516 aa10.58□□□□□ -0.72
CHD4-203ENST00000535717 SOX14O95416 240 aa10.58□□□□□ -0.72
CHD4-203ENST00000535717 TXNDC12O95881 172 aa10.58□□□□□ -0.72
CHD4-203ENST00000535717 QDPRP09417 244 aa10.58□□□□□ -0.72
CHD4-203ENST00000535717 APEHP13798 732 aaKnown RBP10.58□□□□□ -0.72
CHD4-203ENST00000535717 ANXA8P13928 327 aa10.58□□□□□ -0.72
CHD4-203ENST00000535717 SDHAP31040 664 aa10.58□□□□□ -0.72
CHD4-203ENST00000535717 RPS6KA3P51812 740 aa10.58□□□□□ -0.72
CHD4-203ENST00000535717 SH3BGRP55822 239 aaPredicted RBP10.58□□□□□ -0.72
CHD4-203ENST00000535717 FMODQ06828 376 aa10.58□□□□□ -0.72
CHD4-203ENST00000535717 COX10Q12887 443 aa10.58□□□□□ -0.72
CHD4-203ENST00000535717 TAB1Q15750 504 aa10.58□□□□□ -0.72
CHD4-203ENST00000535717 STK11Q15831 433 aa10.58□□□□□ -0.72
CHD4-203ENST00000535717 HIKESHIQ53FT3 197 aa10.58□□□□□ -0.72
CHD4-203ENST00000535717 MESTQ5EB52 335 aa10.58□□□□□ -0.72
CHD4-203ENST00000535717 CLEC12AQ5QGZ9 265 aa10.58□□□□□ -0.72
CHD4-203ENST00000535717 TIMM23BQ5SRD1 257 aa10.58□□□□□ -0.72
CHD4-203ENST00000535717 GPR139Q6DWJ6 353 aa10.58□□□□□ -0.72
CHD4-203ENST00000535717 RPL13AP3Q6NVV1 102 aa10.58□□□□□ -0.72
CHD4-203ENST00000535717 FAHD1Q6P587 224 aa10.58□□□□□ -0.72
CHD4-203ENST00000535717 P2RY8Q86VZ1 359 aa10.58□□□□□ -0.72
CHD4-203ENST00000535717 HIPK1Q86Z02 1210 aa10.58□□□□□ -0.72
CHD4-203ENST00000535717 WDR31Q8NA23 367 aa10.58□□□□□ -0.72
CHD4-203ENST00000535717 ATG16L2Q8NAA4 619 aa10.58□□□□□ -0.72
CHD4-203ENST00000535717 MAGEE2Q8TD90 523 aaPredicted RBP10.58□□□□□ -0.72
CHD4-203ENST00000535717 HSD17B8Q92506 261 aa10.58□□□□□ -0.72
CHD4-203ENST00000535717 MCHR2Q969V1 340 aa10.58□□□□□ -0.72
CHD4-203ENST00000535717 BOD1Q96IK1 185 aa10.58□□□□□ -0.72
CHD4-203ENST00000535717 ERMAPQ96PL5 475 aaPredicted RBP10.58□□□□□ -0.72
CHD4-203ENST00000535717 USB1Q9BQ65 265 aaKnown RBP10.58□□□□□ -0.72
CHD4-203ENST00000535717 ALG12Q9BV10 488 aa10.58□□□□□ -0.72
CHD4-203ENST00000535717 IFT27Q9BW83 186 aa10.58□□□□□ -0.72
CHD4-203ENST00000535717 NELFAQ9H3P2 528 aa10.58□□□□□ -0.72
CHD4-203ENST00000535717 SLC17A5Q9NRA2 495 aa10.58□□□□□ -0.72
CHD4-203ENST00000535717 A0A096LPE4 126 aa10.57□□□□□ -0.72
CHD4-203ENST00000535717 IGKV1D-43A0A0B4J1Z2 117 aa10.57□□□□□ -0.72
CHD4-203ENST00000535717 A0A1W2PPZ6 126 aa10.57□□□□□ -0.72
CHD4-203ENST00000535717 A0A1W2PR80 420 aa10.57□□□□□ -0.72
CHD4-203ENST00000535717 SLC22A23A1A5C7 686 aa10.57□□□□□ -0.72
CHD4-203ENST00000535717 PRSS37A4D1T9 235 aa10.57□□□□□ -0.72
CHD4-203ENST00000535717 ZNF99A8MXY4 864 aaPredicted RBP10.57□□□□□ -0.72
CHD4-203ENST00000535717 H7C1C5 153 aa10.57□□□□□ -0.72
CHD4-203ENST00000535717 BHLHE40O14503 412 aa10.57□□□□□ -0.72
CHD4-203ENST00000535717 SOCS2O14508 198 aa10.57□□□□□ -0.72
CHD4-203ENST00000535717 XKRYO14609 159 aa10.57□□□□□ -0.72
CHD4-203ENST00000535717 IMPA2O14732 288 aa10.57□□□□□ -0.72
CHD4-203ENST00000535717 CASKO14936 926 aa10.57□□□□□ -0.72
CHD4-203ENST00000535717 ARPC3O15145 178 aa10.57□□□□□ -0.72
CHD4-203ENST00000535717 DHHO43323 396 aa10.57□□□□□ -0.72
CHD4-203ENST00000535717 SEC14L2O76054 403 aa10.57□□□□□ -0.72
CHD4-203ENST00000535717 SLC2A10O95528 541 aa10.57□□□□□ -0.72
CHD4-203ENST00000535717 ZNF23P17027 643 aa10.57□□□□□ -0.72
CHD4-203ENST00000535717 DAPP51397 102 aa10.57□□□□□ -0.72
CHD4-203ENST00000535717 ZNF133P52736 654 aaPredicted RBP10.57□□□□□ -0.72
CHD4-203ENST00000535717 LCN6P62502 163 aa10.57□□□□□ -0.72
CHD4-203ENST00000535717 CD47Q08722 323 aa10.57□□□□□ -0.72
CHD4-203ENST00000535717 KRR1Q13601 381 aaKnown RBP10.57□□□□□ -0.72
CHD4-203ENST00000535717 DAZAP2Q15038 168 aaPredicted RBP10.57□□□□□ -0.72
CHD4-203ENST00000535717 TBRG1Q3YBR2 411 aa10.57□□□□□ -0.72
CHD4-203ENST00000535717 SLC36A3Q495N2 470 aa10.57□□□□□ -0.72
CHD4-203ENST00000535717 ALKBH2Q6NS38 261 aa10.57□□□□□ -0.72
CHD4-203ENST00000535717 ANKRD16Q6P6B7 361 aa10.57□□□□□ -0.72
CHD4-203ENST00000535717 SLC25A47Q6Q0C1 308 aa10.57□□□□□ -0.72
CHD4-203ENST00000535717 SEZ6L2Q6UXD5 910 aa10.57□□□□□ -0.72
CHD4-203ENST00000535717 PTCHD4Q6ZW05 846 aa10.57□□□□□ -0.72
CHD4-203ENST00000535717 ZNF627Q7L945 461 aa10.57□□□□□ -0.72
CHD4-203ENST00000535717 WFDC8Q8IUA0 241 aa10.57□□□□□ -0.72
CHD4-203ENST00000535717 ZDHHC13Q8IUH4 622 aa10.57□□□□□ -0.72
CHD4-203ENST00000535717 SVOPLQ8N434 492 aa10.57□□□□□ -0.72
CHD4-203ENST00000535717 C17orf78Q8N4C9 275 aa10.57□□□□□ -0.72
CHD4-203ENST00000535717 OR52L1Q8NGH7 329 aa10.57□□□□□ -0.72
CHD4-203ENST00000535717 OR52N5Q8NH56 324 aa10.57□□□□□ -0.72
CHD4-203ENST00000535717 TSSK6Q9BXA6 273 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms