RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, human

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-223	ENST00000534442	DCTN5	Q9BTE1	182 aa		3.59	□□□□□ -1.83
ECHDC1-223	ENST00000534442	DGCR6L	Q9BY27	220 aa		3.59	□□□□□ -1.83
ECHDC1-223	ENST00000534442	ZYG11B	Q9C0D3	744 aa		3.59	□□□□□ -1.83
ECHDC1-223	ENST00000534442	BPESC1	Q9GZL8	116 aa		3.59	□□□□□ -1.83
ECHDC1-223	ENST00000534442	TMEM231	Q9H6L2	316 aa		3.59	□□□□□ -1.83
ECHDC1-223	ENST00000534442	PLEKHA3	Q9HB20	300 aa		3.59	□□□□□ -1.83
ECHDC1-223	ENST00000534442	UBE2T	Q9NPD8	197 aa	Predicted RBP	3.59	□□□□□ -1.83
ECHDC1-223	ENST00000534442	POLE3	Q9NRF9	147 aa		3.59	□□□□□ -1.83
ECHDC1-223	ENST00000534442	SPRR3	Q9UBC9	169 aa		3.59	□□□□□ -1.83
ECHDC1-223	ENST00000534442	LHX3	Q9UBR4	397 aa		3.59	□□□□□ -1.83
ECHDC1-223	ENST00000534442	SNX10	Q9Y5X0	201 aa		3.59	□□□□□ -1.83
ECHDC1-223	ENST00000534442	PKD1	P98161	4303 aa		3.59	□□□□□ -1.84
ECHDC1-223	ENST00000534442	VPS13D	Q5THJ4	4388 aa		3.58	□□□□□ -1.84
ECHDC1-223	ENST00000534442	MPTX1	A8MV57	137 aa		3.58	□□□□□ -1.84
ECHDC1-223	ENST00000534442	GPR89A	B7ZAQ6	455 aa		3.58	□□□□□ -1.84
ECHDC1-223	ENST00000534442		F8WDY8	70 aa		3.58	□□□□□ -1.84
ECHDC1-223	ENST00000534442		M0QYV0	167 aa		3.58	□□□□□ -1.84
ECHDC1-223	ENST00000534442	NDUFS8	O00217	210 aa		3.58	□□□□□ -1.84
ECHDC1-223	ENST00000534442	KMO	O15229	486 aa		3.58	□□□□□ -1.84
ECHDC1-223	ENST00000534442	PFKFB2	O60825	505 aa		3.58	□□□□□ -1.84
ECHDC1-223	ENST00000534442	MTRF1	O75570	445 aa	Known RBP	3.58	□□□□□ -1.84
ECHDC1-223	ENST00000534442	DEDD	O75618	318 aa		3.58	□□□□□ -1.84
ECHDC1-223	ENST00000534442	ANXA9	O76027	345 aa		3.58	□□□□□ -1.84
ECHDC1-223	ENST00000534442	CLPX	O76031	633 aa		3.58	□□□□□ -1.84
ECHDC1-223	ENST00000534442	DUS4L	O95620	317 aa	Known RBP	3.58	□□□□□ -1.84
ECHDC1-223	ENST00000534442	DIRAS3	O95661	229 aa		3.58	□□□□□ -1.84
ECHDC1-223	ENST00000534442	IGLV1-44	P01699	117 aa		3.58	□□□□□ -1.84
ECHDC1-223	ENST00000534442	CCDC159	P0C7I6	412 aa		3.58	□□□□□ -1.84
ECHDC1-223	ENST00000534442	GPR89B	P0CG08	455 aa		3.58	□□□□□ -1.84
ECHDC1-223	ENST00000534442	IGLL1	P15814	213 aa		3.58	□□□□□ -1.84
ECHDC1-223	ENST00000534442	ZNF7	P17097	686 aa	Predicted RBP	3.58	□□□□□ -1.84
ECHDC1-223	ENST00000534442	PRDX3	P30048	256 aa	Known RBP	3.58	□□□□□ -1.84
ECHDC1-223	ENST00000534442	SLC6A8	P48029	635 aa		3.58	□□□□□ -1.84
ECHDC1-223	ENST00000534442	CSNK1D	P48730	415 aa		3.58	□□□□□ -1.84
ECHDC1-223	ENST00000534442	HSD17B7	P56937	341 aa		3.58	□□□□□ -1.84
ECHDC1-223	ENST00000534442	CYCS	P99999	105 aa	Known RBP	3.58	□□□□□ -1.84
ECHDC1-223	ENST00000534442	MYBPC1	Q00872	1141 aa		3.58	□□□□□ -1.84
ECHDC1-223	ENST00000534442	TNFRSF17	Q02223	184 aa		3.58	□□□□□ -1.84
ECHDC1-223	ENST00000534442	BCL2L1	Q07817	233 aa		3.58	□□□□□ -1.84
ECHDC1-223	ENST00000534442	RBBP4	Q09028	425 aa		3.58	□□□□□ -1.84
ECHDC1-223	ENST00000534442	KLHL30	Q0D2K2	578 aa		3.58	□□□□□ -1.84
ECHDC1-223	ENST00000534442	SLC17A1	Q14916	467 aa		3.58	□□□□□ -1.84
ECHDC1-223	ENST00000534442	SLC9A3R2	Q15599	337 aa		3.58	□□□□□ -1.84
ECHDC1-223	ENST00000534442	IL23R	Q5VWK5	629 aa		3.58	□□□□□ -1.84
ECHDC1-223	ENST00000534442	H3F3C	Q6NXT2	135 aa		3.58	□□□□□ -1.84
ECHDC1-223	ENST00000534442	FAHD2B	Q6P2I3	314 aa	Predicted RBP	3.58	□□□□□ -1.84
ECHDC1-223	ENST00000534442		Q6ZRG5	221 aa		3.58	□□□□□ -1.84
ECHDC1-223	ENST00000534442	KIAA1328	Q86T90	577 aa		3.58	□□□□□ -1.84
ECHDC1-223	ENST00000534442	AMZ2	Q86W34	360 aa		3.58	□□□□□ -1.84
ECHDC1-223	ENST00000534442	SLC26A11	Q86WA9	606 aa		3.58	□□□□□ -1.84
ECHDC1-223	ENST00000534442	CDKL3	Q8IVW4	592 aa	Predicted RBP	3.58	□□□□□ -1.84
ECHDC1-223	ENST00000534442	TEX29	Q8N6K0	151 aa		3.58	□□□□□ -1.84
ECHDC1-223	ENST00000534442	OR52B4	Q8NGK2	314 aa		3.58	□□□□□ -1.84
ECHDC1-223	ENST00000534442	OR2T6	Q8NHC8	308 aa		3.58	□□□□□ -1.84
ECHDC1-223	ENST00000534442	C11orf52	Q96A22	123 aa		3.58	□□□□□ -1.84
ECHDC1-223	ENST00000534442	FAF2	Q96CS3	445 aa		3.58	□□□□□ -1.84
ECHDC1-223	ENST00000534442	FAHD2A	Q96GK7	314 aa		3.58	□□□□□ -1.84
ECHDC1-223	ENST00000534442	IMMP1L	Q96LU5	166 aa		3.58	□□□□□ -1.84
ECHDC1-223	ENST00000534442	FOXN4	Q96NZ1	517 aa		3.58	□□□□□ -1.84
ECHDC1-223	ENST00000534442	TIMM29	Q9BSF4	260 aa		3.58	□□□□□ -1.84
ECHDC1-223	ENST00000534442	NMNAT2	Q9BZQ4	307 aa		3.58	□□□□□ -1.84
ECHDC1-223	ENST00000534442	EXO5	Q9H790	373 aa		3.58	□□□□□ -1.84
ECHDC1-223	ENST00000534442	SLC25A19	Q9HC21	320 aa		3.58	□□□□□ -1.84
ECHDC1-223	ENST00000534442	B3GAT2	Q9NPZ5	323 aa		3.58	□□□□□ -1.84
ECHDC1-223	ENST00000534442	CGN	Q9P2M7	1197 aa	Known RBP	3.58	□□□□□ -1.84
ECHDC1-223	ENST00000534442	ERVK-18	Q9QC07	812 aa		3.58	□□□□□ -1.84
ECHDC1-223	ENST00000534442	SLC23A2	Q9UGH3	650 aa		3.58	□□□□□ -1.84
ECHDC1-223	ENST00000534442	CD84	Q9UIB8	345 aa		3.58	□□□□□ -1.84
ECHDC1-223	ENST00000534442	RNF115	Q9Y4L5	304 aa		3.58	□□□□□ -1.84
ECHDC1-223	ENST00000534442	FAT1	Q14517	4588 aa		3.58	□□□□□ -1.84
ECHDC1-223	ENST00000534442	IGHV3-38	A0A0C4DH36	116 aa		3.57	□□□□□ -1.84
ECHDC1-223	ENST00000534442		A0A1W2PQ67	120 aa		3.57	□□□□□ -1.84
ECHDC1-223	ENST00000534442	LOC390937	A0A1W2PQ73	354 aa		3.57	□□□□□ -1.84
ECHDC1-223	ENST00000534442	MEX3A	A1L020	520 aa	Known RBP	3.57	□□□□□ -1.84
ECHDC1-223	ENST00000534442	PINLYP	A6NC86	204 aa		3.57	□□□□□ -1.84
ECHDC1-223	ENST00000534442	FRG2C	A6NGY1	282 aa		3.57	□□□□□ -1.84
ECHDC1-223	ENST00000534442	ZNF724	A8MTY0	619 aa		3.57	□□□□□ -1.84
ECHDC1-223	ENST00000534442	CLDN34	H7C241	214 aa		3.57	□□□□□ -1.84
ECHDC1-223	ENST00000534442	TRAFD1	O14545	582 aa	Predicted RBP	3.57	□□□□□ -1.84
ECHDC1-223	ENST00000534442	SH2D1B	O14796	132 aa		3.57	□□□□□ -1.84
ECHDC1-223	ENST00000534442	ARPC1B	O15143	372 aa	Known RBP	3.57	□□□□□ -1.84
ECHDC1-223	ENST00000534442	HCRTR1	O43613	425 aa		3.57	□□□□□ -1.84
ECHDC1-223	ENST00000534442	LANCL1	O43813	399 aa		3.57	□□□□□ -1.84
ECHDC1-223	ENST00000534442	HEXB	P07686	556 aa		3.57	□□□□□ -1.84
ECHDC1-223	ENST00000534442	ALOX5	P09917	674 aa		3.57	□□□□□ -1.84
ECHDC1-223	ENST00000534442	NCF1	P14598	390 aa	Predicted RBP	3.57	□□□□□ -1.84
ECHDC1-223	ENST00000534442	CYP11B1	P15538	503 aa		3.57	□□□□□ -1.84
ECHDC1-223	ENST00000534442	PRDX2	P32119	198 aa		3.57	□□□□□ -1.84
ECHDC1-223	ENST00000534442	CD79B	P40259	229 aa		3.57	□□□□□ -1.84
ECHDC1-223	ENST00000534442	ID1	P41134	155 aa		3.57	□□□□□ -1.84
ECHDC1-223	ENST00000534442	MAGEA5	P43359	124 aa		3.57	□□□□□ -1.84
ECHDC1-223	ENST00000534442	GABRA4	P48169	554 aa		3.57	□□□□□ -1.84
ECHDC1-223	ENST00000534442	NPY2R	P49146	381 aa		3.57	□□□□□ -1.84
ECHDC1-223	ENST00000534442	RPL34	P49207	117 aa	Known RBP	3.57	□□□□□ -1.84
ECHDC1-223	ENST00000534442	CYB561	P49447	251 aa		3.57	□□□□□ -1.84
ECHDC1-223	ENST00000534442	DIO3	P55073	304 aa		3.57	□□□□□ -1.84
ECHDC1-223	ENST00000534442	ABCE1	P61221	599 aa	Known RBP	3.57	□□□□□ -1.84
ECHDC1-223	ENST00000534442	SNX1	Q13596	522 aa		3.57	□□□□□ -1.84
ECHDC1-223	ENST00000534442	KLF5	Q13887	457 aa	Predicted RBP	3.57	□□□□□ -1.84
ECHDC1-223	ENST00000534442	CYTH1	Q15438	398 aa		3.57	□□□□□ -1.84

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