RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 ERCC1P07992 297 aaPredicted RBP2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 RPSAP08865 295 aaKnown RBP2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 OPN1MW2P0DN77 364 aa2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 OPN1MW3P0DN78 364 aa2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 TFPIP10646 304 aa2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 ACP2P11117 423 aa2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 ANPEPP15144 967 aa2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 ACHEP22303 614 aa2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 EPHA3P29320 983 aa2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 SERPINB1P30740 379 aa2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 HSD17B3P37058 310 aa2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 ARL1P40616 181 aaPredicted RBP2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 EIF1P41567 113 aaKnown RBP2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 RAD52P43351 418 aa2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 ASMTP46597 345 aa2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 NCBP2P52298 156 aaKnown RBP eCLIP2.48□□□□□ -2.013e-20■■□□□ 11.5
CHMP4A-208ENST00000534106 OR2B6P58173 313 aa2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 MAGOHP61326 146 aaKnown RBP2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 ARF1P84077 181 aaKnown RBP2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 NPRL3Q12980 569 aa2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 ZNF154Q13106 437 aa2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 SNTB2Q13425 540 aaKnown RBP2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 GTF2H2Q13888 395 aa2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 QPRTQ15274 297 aa2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 PPP1R7Q15435 360 aa2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 TWIST1Q15672 202 aa2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 TSTQ16762 297 aaKnown RBP2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 KRTAP27-1Q3LI81 207 aa2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 SLC9B1Q4ZJI4 515 aa2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 ARMCX4Q5H9R4 360 aa2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 SPANXN3Q5MJ09 141 aa2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 LCE1EQ5T753 118 aa2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 ATPAF1Q5TC12 328 aaPredicted RBP2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 LIPJQ5W064 366 aa2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 SAXO2Q658L1 398 aa2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 ANKRD26P1Q6NSI1 321 aa2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 GTF2H2CQ6P1K8 395 aa2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 EMBQ6PCB8 327 aa2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 CASP12Q6UXS9 341 aa2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 C4orf22Q6V702 233 aa2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 IKBIPQ70UQ0 350 aa2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 CMC1Q7Z7K0 106 aa2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 HMGN2P46Q86SG4 172 aa2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 SLC15A3Q8IY34 581 aa2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 CNPY4Q8N129 248 aa2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 TCAIMQ8N3R3 496 aa2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 MMGT1Q8N4V1 131 aa2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 C1orf52Q8N6N3 182 aaKnown RBP2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 L3MBTL4Q8NA19 623 aa2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 ATG16L2Q8NAA4 619 aa2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 ZBTB8BQ8NAP8 495 aaPredicted RBP2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 CCDC197Q8NCU1 140 aa2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 NUP37Q8NFH4 326 aa2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 OR4F15Q8NGB8 312 aa2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 OR52E2Q8NGJ4 325 aa2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 OR1K1Q8NGR3 316 aa2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 CDC26Q8NHZ8 85 aa2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 RP9Q8TA86 221 aaKnown RBP2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 TRPC4APQ8TEL6 797 aa2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 C16orf78Q8WTQ4 265 aa2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 ATP6V1E2Q96A05 226 aa2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 MAGOHBQ96A72 148 aaKnown RBP2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 ELP4Q96EB1 424 aa2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 THOC1Q96FV9 657 aaKnown RBP2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 LYZL4Q96KX0 146 aa2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 ATP6V1G3Q96LB4 118 aa2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 UBXN10Q96LJ8 280 aa2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 ZNF385AQ96PM9 386 aaKnown RBP2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 BBS4Q96RK4 519 aa2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 ATOH8Q96SQ7 321 aa2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 PRPF18Q99633 342 aaKnown RBP2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 GPA33Q99795 319 aa2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 KCNS3Q9BQ31 491 aa2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 LMF2Q9BU23 707 aaKnown RBP2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 THUMPD3Q9BV44 507 aaKnown RBP2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 KATNB1Q9BVA0 655 aa2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 TMEM120AQ9BXJ8 343 aa2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 EBPLQ9BY08 206 aa2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 PCDHAC1Q9H158 963 aa2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 HIPK2Q9H2X6 1198 aa2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 GLIPR2Q9H4G4 154 aa2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 NOX3Q9HBY0 568 aa2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 Q9N2J8 555 aa2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 KCNK9Q9NPC2 374 aa2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 OBP2BQ9NPH6 170 aa2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 TRIM36Q9NQ86 728 aa2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 SLC35C2Q9NQQ7 365 aa2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 SENP1Q9P0U3 644 aa2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 DNAJB11Q9UBS4 358 aa2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 MALT1Q9UDY8 824 aa2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 KLHL21Q9UJP4 597 aa2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 PURGQ9UJV8 347 aaKnown RBP2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 NDRG4Q9ULP0 352 aaKnown RBP2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 ABCG2Q9UNQ0 655 aa2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 FOXJ3Q9UPW0 622 aa2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 CHMP2BQ9UQN3 213 aa2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 ACOT9Q9Y305 439 aa2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 UTP11Q9Y3A2 253 aaKnown RBP2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 CMAHPQ9Y471 501 aa2.48□□□□□ -2.01
CHMP4A-208ENST00000534106 ANGPTL3Q9Y5C1 460 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms