RNA–Protein interactions for RNA: ENST00000533096.5

COPB1-209, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-209ENST00000533096 FBXL3Q9UKT7 428 aa11.08□□□□□ -0.64
COPB1-209ENST00000533096 IGHV3OR16-10A0A075B7F0 116 aa11.07□□□□□ -0.64
COPB1-209ENST00000533096 IQCMA0A1B0GVH7 501 aa11.07□□□□□ -0.64
COPB1-209ENST00000533096 FARS2O95363 451 aaKnown RBP11.07□□□□□ -0.64
COPB1-209ENST00000533096 GPANK1O95872 356 aa11.07□□□□□ -0.64
COPB1-209ENST00000533096 ZNF250P15622 560 aa11.07□□□□□ -0.64
COPB1-209ENST00000533096 OMGP23515 440 aa11.07□□□□□ -0.64
COPB1-209ENST00000533096 NCALDP61601 193 aa11.07□□□□□ -0.64
COPB1-209ENST00000533096 PLP2Q04941 152 aa11.07□□□□□ -0.64
COPB1-209ENST00000533096 PUDPQ08623 228 aa11.07□□□□□ -0.64
COPB1-209ENST00000533096 RGNQ15493 299 aa11.07□□□□□ -0.64
COPB1-209ENST00000533096 OR1Q1Q15612 314 aa11.07□□□□□ -0.64
COPB1-209ENST00000533096 SPATA46Q5T0L3 261 aa11.07□□□□□ -0.64
COPB1-209ENST00000533096 THEM4Q5T1C6 240 aa11.07□□□□□ -0.64
COPB1-209ENST00000533096 LRFN4Q6PJG9 635 aa11.07□□□□□ -0.64
COPB1-209ENST00000533096 C6orf89Q6UWU4 347 aa11.07□□□□□ -0.64
COPB1-209ENST00000533096 PXKQ7Z7A4 578 aa11.07□□□□□ -0.64
COPB1-209ENST00000533096 COMTD1Q86VU5 262 aa11.07□□□□□ -0.64
COPB1-209ENST00000533096 LRRC18Q8N456 261 aa11.07□□□□□ -0.64
COPB1-209ENST00000533096 LSMEM1Q8N8F7 131 aa11.07□□□□□ -0.64
COPB1-209ENST00000533096 OR4K5Q8NGD3 323 aa11.07□□□□□ -0.64
COPB1-209ENST00000533096 LRRC58Q96CX6 371 aa11.07□□□□□ -0.64
COPB1-209ENST00000533096 SLC41A3Q96GZ6 507 aa11.07□□□□□ -0.64
COPB1-209ENST00000533096 RSPO3Q9BXY4 272 aaPredicted RBP11.07□□□□□ -0.64
COPB1-209ENST00000533096 LRMDAQ9H2I8 198 aa11.07□□□□□ -0.64
COPB1-209ENST00000533096 CENPHQ9H3R5 247 aa11.07□□□□□ -0.64
COPB1-209ENST00000533096 SAP30LQ9HAJ7 183 aa11.07□□□□□ -0.64
COPB1-209ENST00000533096 C12orf10Q9HB07 376 aa11.07□□□□□ -0.64
COPB1-209ENST00000533096 THUMPD1Q9NXG2 353 aaKnown RBP11.07□□□□□ -0.64
COPB1-209ENST00000533096 MRPL39Q9NYK5 338 aaKnown RBP11.07□□□□□ -0.64
COPB1-209ENST00000533096 NKIRAS2Q9NYR9 191 aa11.07□□□□□ -0.64
COPB1-209ENST00000533096 SLC13A4Q9UKG4 626 aa11.07□□□□□ -0.64
COPB1-209ENST00000533096 NUP50Q9UKX7 468 aa11.07□□□□□ -0.64
COPB1-209ENST00000533096 SOX21Q9Y651 276 aaPredicted RBP11.07□□□□□ -0.64
COPB1-209ENST00000533096 DNAJC9-AS1A6NH13 148 aa11.06□□□□□ -0.64
COPB1-209ENST00000533096 CLIC1O00299 241 aa11.06□□□□□ -0.64
COPB1-209ENST00000533096 QDPRP09417 244 aa11.06□□□□□ -0.64
COPB1-209ENST00000533096 GATA3P23771 443 aa11.06□□□□□ -0.64
COPB1-209ENST00000533096 MELKQ14680 651 aa11.06□□□□□ -0.64
COPB1-209ENST00000533096 TBC1D28Q2M2D7 210 aa11.06□□□□□ -0.64
COPB1-209ENST00000533096 MMEL1Q495T6 779 aa11.06□□□□□ -0.64
COPB1-209ENST00000533096 ARMCX4Q5H9R4 360 aa11.06□□□□□ -0.64
COPB1-209ENST00000533096 OGFOD2Q6N063 350 aa11.06□□□□□ -0.64
COPB1-209ENST00000533096 LEG1Q6P5S2 330 aa11.06□□□□□ -0.64
COPB1-209ENST00000533096 SLC35D2Q76EJ3 337 aa11.06□□□□□ -0.64
COPB1-209ENST00000533096 SLC16A14Q7RTX9 510 aa11.06□□□□□ -0.64
COPB1-209ENST00000533096 SCAIQ8N9R8 606 aa11.06□□□□□ -0.64
COPB1-209ENST00000533096 ADPRHL1Q8NDY3 354 aa11.06□□□□□ -0.64
COPB1-209ENST00000533096 OR1J2Q8NGS2 313 aa11.06□□□□□ -0.64
COPB1-209ENST00000533096 NFKBIDQ8NI38 313 aa11.06□□□□□ -0.64
COPB1-209ENST00000533096 BBS10Q8TAM1 723 aa11.06□□□□□ -0.64
COPB1-209ENST00000533096 TMEM54Q969K7 222 aa11.06□□□□□ -0.64
COPB1-209ENST00000533096 ELMOD3Q96FG2 381 aa11.06□□□□□ -0.64
COPB1-209ENST00000533096 GPA33Q99795 319 aa11.06□□□□□ -0.64
COPB1-209ENST00000533096 BCL2L10Q9HD36 194 aa11.06□□□□□ -0.64
COPB1-209ENST00000533096 TNFRSF19Q9NS68 423 aa11.06□□□□□ -0.64
COPB1-209ENST00000533096 TMEM38BQ9NVV0 291 aa11.06□□□□□ -0.64
COPB1-209ENST00000533096 EGFL7Q9UHF1 273 aa11.06□□□□□ -0.64
COPB1-209ENST00000533096 LEF1Q9UJU2 399 aaPredicted RBP11.06□□□□□ -0.64
COPB1-209ENST00000533096 AUP1Q9Y679 476 aa11.06□□□□□ -0.64
COPB1-209ENST00000533096 IGLV3-9A0A075B6K5 115 aa11.05□□□□□ -0.64
COPB1-209ENST00000533096 PLSCR5A0PG75 271 aa11.05□□□□□ -0.64
COPB1-209ENST00000533096 POM121CA8CG34 1229 aa11.05□□□□□ -0.64
COPB1-209ENST00000533096 DHHO43323 396 aa11.05□□□□□ -0.64
COPB1-209ENST00000533096 RNF13O43567 381 aa11.05□□□□□ -0.64
COPB1-209ENST00000533096 CH25HO95992 272 aa11.05□□□□□ -0.64
COPB1-209ENST00000533096 PTHP01270 115 aa11.05□□□□□ -0.64
COPB1-209ENST00000533096 IGHV1-46P01743 117 aa11.05□□□□□ -0.64
COPB1-209ENST00000533096 ZCCHC18P0CG32 403 aa11.05□□□□□ -0.64
COPB1-209ENST00000533096 GCH1P30793 250 aa11.05□□□□□ -0.64
COPB1-209ENST00000533096 PRKAR1BP31321 381 aa11.05□□□□□ -0.64
COPB1-209ENST00000533096 APLNRP35414 380 aa11.05□□□□□ -0.64
COPB1-209ENST00000533096 ATP4BP51164 291 aa11.05□□□□□ -0.64
COPB1-209ENST00000533096 POLR2JP52435 117 aaKnown RBP11.05□□□□□ -0.64
COPB1-209ENST00000533096 CDH12P55289 794 aa11.05□□□□□ -0.64
COPB1-209ENST00000533096 SRSF4Q08170 494 aaKnown RBP11.05□□□□□ -0.64
COPB1-209ENST00000533096 BST1Q10588 318 aa11.05□□□□□ -0.64
COPB1-209ENST00000533096 MPP2Q14168 576 aa11.05□□□□□ -0.64
COPB1-209ENST00000533096 SLC36A2Q495M3 483 aa11.05□□□□□ -0.64
COPB1-209ENST00000533096 SLC2A7Q6PXP3 512 aa11.05□□□□□ -0.64
COPB1-209ENST00000533096 RBM15BQ8NDT2 890 aaKnown RBP11.05□□□□□ -0.64
COPB1-209ENST00000533096 OR5J2Q8NH18 312 aa11.05□□□□□ -0.64
COPB1-209ENST00000533096 SLC35B4Q969S0 331 aa11.05□□□□□ -0.64
COPB1-209ENST00000533096 ZNF566Q969W8 418 aa11.05□□□□□ -0.64
COPB1-209ENST00000533096 SLC25A28Q96A46 364 aa11.05□□□□□ -0.64
COPB1-209ENST00000533096 WFDC6Q9BQY6 131 aa11.05□□□□□ -0.64
COPB1-209ENST00000533096 BCL2L14Q9BZR8 327 aa11.05□□□□□ -0.64
COPB1-209ENST00000533096 MS4A7Q9GZW8 240 aaPredicted RBP11.05□□□□□ -0.64
COPB1-209ENST00000533096 A4GALTQ9NPC4 353 aa11.05□□□□□ -0.64
COPB1-209ENST00000533096 EIF3KQ9UBQ5 218 aaKnown RBP11.05□□□□□ -0.64
COPB1-209ENST00000533096 MGAM2Q2M2H8 2515 aa11.04□□□□□ -0.64
COPB1-209ENST00000533096 TRAPPC2LH3BP13 241 aa11.04□□□□□ -0.64
COPB1-209ENST00000533096 RGS16O15492 202 aaPredicted RBP11.04□□□□□ -0.64
COPB1-209ENST00000533096 FOXH1O75593 365 aa11.04□□□□□ -0.64
COPB1-209ENST00000533096 FSHBP01225 129 aa11.04□□□□□ -0.64
COPB1-209ENST00000533096 IGHV3-13P01766 116 aa11.04□□□□□ -0.64
COPB1-209ENST00000533096 HIST1H2ABP04908 130 aa11.04□□□□□ -0.64
COPB1-209ENST00000533096 IDO1P14902 403 aa11.04□□□□□ -0.64
COPB1-209ENST00000533096 MDKP21741 143 aaPredicted RBP11.04□□□□□ -0.64
COPB1-209ENST00000533096 AQP1P29972 269 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms