RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 C16orf87Q6PH81 154 aa5.13□□□□□ -1.59
HMGB1P42-201ENST00000532126 DHRS4L2Q6PKH6 230 aa5.13□□□□□ -1.59
HMGB1P42-201ENST00000532126 TMPPEQ6ZT21 453 aa5.13□□□□□ -1.59
HMGB1P42-201ENST00000532126 FCRLAQ7L513 359 aa5.13□□□□□ -1.59
HMGB1P42-201ENST00000532126 GDF7Q7Z4P5 450 aa5.13□□□□□ -1.59
HMGB1P42-201ENST00000532126 NET1Q7Z628 596 aaPredicted RBP5.13□□□□□ -1.59
HMGB1P42-201ENST00000532126 ARPINQ7Z6K5 226 aa5.13□□□□□ -1.59
HMGB1P42-201ENST00000532126 PATL1Q86TB9 770 aaKnown RBP5.13□□□□□ -1.59
HMGB1P42-201ENST00000532126 TIGD4Q8IY51 512 aa5.13□□□□□ -1.59
HMGB1P42-201ENST00000532126 SLC43A2Q8N370 569 aa5.13□□□□□ -1.59
HMGB1P42-201ENST00000532126 SMYD1Q8NB12 490 aa5.13□□□□□ -1.59
HMGB1P42-201ENST00000532126 BHLHE22Q8NFJ8 381 aaPredicted RBP5.13□□□□□ -1.59
HMGB1P42-201ENST00000532126 OR52E4Q8NGH9 312 aa5.13□□□□□ -1.59
HMGB1P42-201ENST00000532126 OR6K3Q8NGY3 331 aa5.13□□□□□ -1.59
HMGB1P42-201ENST00000532126 ABHD3Q8WU67 409 aa5.13□□□□□ -1.59
HMGB1P42-201ENST00000532126 SLC35B4Q969S0 331 aa5.13□□□□□ -1.59
HMGB1P42-201ENST00000532126 CMTM5Q96DZ9 223 aa5.13□□□□□ -1.59
HMGB1P42-201ENST00000532126 ZHX1-C8orf76Q96EF9 292 aa5.13□□□□□ -1.59
HMGB1P42-201ENST00000532126 DNAJA3Q96EY1 480 aa5.13□□□□□ -1.59
HMGB1P42-201ENST00000532126 ZNF559Q9BR84 538 aa5.13□□□□□ -1.59
HMGB1P42-201ENST00000532126 OR11A1Q9GZK7 315 aa5.13□□□□□ -1.59
HMGB1P42-201ENST00000532126 OPN3Q9H1Y3 402 aaPredicted RBP5.13□□□□□ -1.59
HMGB1P42-201ENST00000532126 EFCAB1Q9HAE3 211 aa5.13□□□□□ -1.59
HMGB1P42-201ENST00000532126 CHCHD3Q9NX63 227 aaKnown RBP5.13□□□□□ -1.59
HMGB1P42-201ENST00000532126 TMEM181Q9P2C4 612 aa5.13□□□□□ -1.59
HMGB1P42-201ENST00000532126 KLHL9Q9P2J3 617 aa5.13□□□□□ -1.59
HMGB1P42-201ENST00000532126 KLHL13Q9P2N7 655 aa5.13□□□□□ -1.59
HMGB1P42-201ENST00000532126 RPS6KB2Q9UBS0 482 aa5.13□□□□□ -1.59
HMGB1P42-201ENST00000532126 NKX1-2Q9UD57 310 aaPredicted RBP5.13□□□□□ -1.59
HMGB1P42-201ENST00000532126 KCNN3Q9UGI6 736 aa5.13□□□□□ -1.59
HMGB1P42-201ENST00000532126 PROCRQ9UNN8 238 aa5.13□□□□□ -1.59
HMGB1P42-201ENST00000532126 TMED7Q9Y3B3 224 aa5.13□□□□□ -1.59
HMGB1P42-201ENST00000532126 HDGFL3Q9Y3E1 203 aa5.13□□□□□ -1.59
HMGB1P42-201ENST00000532126 CHST2Q9Y4C5 530 aa5.13□□□□□ -1.59
HMGB1P42-201ENST00000532126 PTPN13Q12923 2485 aa5.13□□□□□ -1.59
HMGB1P42-201ENST00000532126 MYO7BQ6PIF6 2116 aa5.12□□□□□ -1.59
HMGB1P42-201ENST00000532126 SPTAN1Q13813 2472 aaKnown RBP5.12□□□□□ -1.59
HMGB1P42-201ENST00000532126 TUBAL3A6NHL2 446 aa5.12□□□□□ -1.59
HMGB1P42-201ENST00000532126 A8MVM7 634 aa5.12□□□□□ -1.59
HMGB1P42-201ENST00000532126 SMAD9O15198 467 aaKnown RBP5.12□□□□□ -1.59
HMGB1P42-201ENST00000532126 TPST1O60507 370 aa5.12□□□□□ -1.59
HMGB1P42-201ENST00000532126 CYTIPO60759 359 aa5.12□□□□□ -1.59
HMGB1P42-201ENST00000532126 PMS2P2O95744 297 aa5.12□□□□□ -1.59
HMGB1P42-201ENST00000532126 CGAP01215 116 aa5.12□□□□□ -1.59
HMGB1P42-201ENST00000532126 IFNA14P01570 189 aa5.12□□□□□ -1.59
HMGB1P42-201ENST00000532126 OPN1SWP03999 348 aa5.12□□□□□ -1.59
HMGB1P42-201ENST00000532126 YES1P07947 543 aa5.12□□□□□ -1.59
HMGB1P42-201ENST00000532126 PRF1P14222 555 aa5.12□□□□□ -1.59
HMGB1P42-201ENST00000532126 POU2F1P14859 743 aa5.12□□□□□ -1.59
HMGB1P42-201ENST00000532126 POU1F1P28069 291 aa5.12□□□□□ -1.59
HMGB1P42-201ENST00000532126 PRDX6P30041 224 aa5.12□□□□□ -1.59
HMGB1P42-201ENST00000532126 AGTR1P30556 359 aa5.12□□□□□ -1.59
HMGB1P42-201ENST00000532126 SSTR2P30874 369 aa5.12□□□□□ -1.59
HMGB1P42-201ENST00000532126 IDUAP35475 653 aa5.12□□□□□ -1.59
HMGB1P42-201ENST00000532126 MTNR1AP48039 350 aa5.12□□□□□ -1.59
HMGB1P42-201ENST00000532126 NUDT2P50583 147 aa5.12□□□□□ -1.59
HMGB1P42-201ENST00000532126 RGS8P57771 180 aaPredicted RBP5.12□□□□□ -1.59
HMGB1P42-201ENST00000532126 OR2B6P58173 313 aa5.12□□□□□ -1.59
HMGB1P42-201ENST00000532126 ERVFRD-1P60508 538 aa5.12□□□□□ -1.59
HMGB1P42-201ENST00000532126 NCALDP61601 193 aa5.12□□□□□ -1.59
HMGB1P42-201ENST00000532126 SLC35A1P78382 337 aa5.12□□□□□ -1.59
HMGB1P42-201ENST00000532126 SORDQ00796 357 aa5.12□□□□□ -1.59
HMGB1P42-201ENST00000532126 TLE4Q04727 773 aa5.12□□□□□ -1.59
HMGB1P42-201ENST00000532126 DMTNQ08495 405 aa5.12□□□□□ -1.59
HMGB1P42-201ENST00000532126 RASGEF1BQ0VAM2 473 aa5.12□□□□□ -1.59
HMGB1P42-201ENST00000532126 BNIP2Q12982 314 aa5.12□□□□□ -1.59
HMGB1P42-201ENST00000532126 VEZF1Q14119 521 aa5.12□□□□□ -1.59
HMGB1P42-201ENST00000532126 GUSBP1Q15486 140 aa5.12□□□□□ -1.59
HMGB1P42-201ENST00000532126 EXOC3L2Q2M3D2 409 aa5.12□□□□□ -1.59
HMGB1P42-201ENST00000532126 PCGF3Q3KNV8 242 aa5.12□□□□□ -1.59
HMGB1P42-201ENST00000532126 FAM90A2PQ658T7 463 aa5.12□□□□□ -1.59
HMGB1P42-201ENST00000532126 ERICH5Q6P6B1 374 aa5.12□□□□□ -1.59
HMGB1P42-201ENST00000532126 TMEM88Q6PEY1 159 aa5.12□□□□□ -1.59
HMGB1P42-201ENST00000532126 ZNF474Q6S9Z5 364 aaPredicted RBP5.12□□□□□ -1.59
HMGB1P42-201ENST00000532126 CCDC80Q76M96 950 aa5.12□□□□□ -1.59
HMGB1P42-201ENST00000532126 PIGWQ7Z7B1 504 aa5.12□□□□□ -1.59
HMGB1P42-201ENST00000532126 ATG4DQ86TL0 474 aaPredicted RBP5.12□□□□□ -1.59
HMGB1P42-201ENST00000532126 STK32CQ86UX6 486 aa5.12□□□□□ -1.59
HMGB1P42-201ENST00000532126 COMTD1Q86VU5 262 aa5.12□□□□□ -1.59
HMGB1P42-201ENST00000532126 RANBP3LQ86VV4 465 aaPredicted RBP5.12□□□□□ -1.59
HMGB1P42-201ENST00000532126 CALHM3Q86XJ0 350 aa5.12□□□□□ -1.59
HMGB1P42-201ENST00000532126 EGFL6Q8IUX8 553 aa5.12□□□□□ -1.59
HMGB1P42-201ENST00000532126 CMTM4Q8IZR5 234 aa5.12□□□□□ -1.59
HMGB1P42-201ENST00000532126 NHLRC2Q8NBF2 726 aa5.12□□□□□ -1.59
HMGB1P42-201ENST00000532126 RBM15BQ8NDT2 890 aaKnown RBP5.12□□□□□ -1.59
HMGB1P42-201ENST00000532126 OR2T12Q8NG77 320 aa5.12□□□□□ -1.59
HMGB1P42-201ENST00000532126 SLC26A7Q8TE54 656 aa5.12□□□□□ -1.59
HMGB1P42-201ENST00000532126 FAM222BQ8WU58 562 aa5.12□□□□□ -1.59
HMGB1P42-201ENST00000532126 RASSF5Q8WWW0 418 aa5.12□□□□□ -1.59
HMGB1P42-201ENST00000532126 NPIPB3Q92617 1050 aa5.12□□□□□ -1.59
HMGB1P42-201ENST00000532126 C14orf79Q96F83 325 aa5.12□□□□□ -1.59
HMGB1P42-201ENST00000532126 ARL5BQ96KC2 179 aa5.12□□□□□ -1.59
HMGB1P42-201ENST00000532126 ZNF583Q96ND8 569 aa5.12□□□□□ -1.59
HMGB1P42-201ENST00000532126 LRRC37BQ96QE4 947 aa5.12□□□□□ -1.59
HMGB1P42-201ENST00000532126 HOPXQ9BPY8 73 aaPredicted RBP5.12□□□□□ -1.59
HMGB1P42-201ENST00000532126 SRSF8Q9BRL6 282 aaKnown RBP5.12□□□□□ -1.59
HMGB1P42-201ENST00000532126 RSPO3Q9BXY4 272 aaPredicted RBP5.12□□□□□ -1.59
HMGB1P42-201ENST00000532126 POTEKPQ9BYX7 375 aa5.12□□□□□ -1.59
HMGB1P42-201ENST00000532126 TRIM2Q9C040 744 aa5.12□□□□□ -1.59
HMGB1P42-201ENST00000532126 EVA1AQ9H8M9 152 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms