RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 MYBPC1Q00872 1141 aa11.06□□□□□ -0.64
COPB1-208ENST00000532088 FOXF2Q12947 444 aa11.06□□□□□ -0.64
COPB1-208ENST00000532088 KEAP1Q14145 624 aa11.06□□□□□ -0.64
COPB1-208ENST00000532088 SNCBQ16143 134 aa11.06□□□□□ -0.64
COPB1-208ENST00000532088 SLC25A35Q3KQZ1 300 aa11.06□□□□□ -0.64
COPB1-208ENST00000532088 CLEC12AQ5QGZ9 265 aa11.06□□□□□ -0.64
COPB1-208ENST00000532088 TTC23Q5W5X9 447 aa11.06□□□□□ -0.64
COPB1-208ENST00000532088 C12orf73Q69YU5 71 aa11.06□□□□□ -0.64
COPB1-208ENST00000532088 NIPAL3Q6P499 406 aa11.06□□□□□ -0.64
COPB1-208ENST00000532088 CASP12Q6UXS9 341 aa11.06□□□□□ -0.64
COPB1-208ENST00000532088 TFAP2EQ6VUC0 442 aa11.06□□□□□ -0.64
COPB1-208ENST00000532088 NUFIP2Q7Z417 695 aaKnown RBP11.06□□□□□ -0.64
COPB1-208ENST00000532088 ABHD12BQ7Z5M8 362 aaPredicted RBP11.06□□□□□ -0.64
COPB1-208ENST00000532088 C20orf196Q8IYI0 205 aa11.06□□□□□ -0.64
COPB1-208ENST00000532088 GALNT4Q8N4A0 578 aa11.06□□□□□ -0.64
COPB1-208ENST00000532088 NOXO1Q8NFA2 376 aa11.06□□□□□ -0.64
COPB1-208ENST00000532088 TRUB1Q8WWH5 349 aaKnown RBP11.06□□□□□ -0.64
COPB1-208ENST00000532088 TMEM54Q969K7 222 aa11.06□□□□□ -0.64
COPB1-208ENST00000532088 CCDC120Q96HB5 630 aa11.06□□□□□ -0.64
COPB1-208ENST00000532088 TXNDC15Q96J42 360 aa11.06□□□□□ -0.64
COPB1-208ENST00000532088 Q96M85 177 aa11.06□□□□□ -0.64
COPB1-208ENST00000532088 SLC38A2Q96QD8 506 aa11.06□□□□□ -0.64
COPB1-208ENST00000532088 MBOAT4Q96T53 435 aa11.06□□□□□ -0.64
COPB1-208ENST00000532088 SLCO5A1Q9H2Y9 848 aa11.06□□□□□ -0.64
COPB1-208ENST00000532088 FN3KQ9H479 309 aa11.06□□□□□ -0.64
COPB1-208ENST00000532088 RIBC2Q9H4K1 309 aa11.06□□□□□ -0.64
COPB1-208ENST00000532088 B3GAT2Q9NPZ5 323 aa11.06□□□□□ -0.64
COPB1-208ENST00000532088 VSX1Q9NZR4 365 aaPredicted RBP11.06□□□□□ -0.64
COPB1-208ENST00000532088 JKAMPQ9P055 326 aa11.06□□□□□ -0.64
COPB1-208ENST00000532088 MALT1Q9UDY8 824 aa11.06□□□□□ -0.64
COPB1-208ENST00000532088 NDRG4Q9ULP0 352 aaKnown RBP11.06□□□□□ -0.64
COPB1-208ENST00000532088 PROCRQ9UNN8 238 aa11.06□□□□□ -0.64
COPB1-208ENST00000532088 ADAM18Q9Y3Q7 739 aa11.06□□□□□ -0.64
COPB1-208ENST00000532088 MED12LQ86YW9 2145 aa11.06□□□□□ -0.64
COPB1-208ENST00000532088 TEX13CA0A0J9YWL9 993 aa11.05□□□□□ -0.64
COPB1-208ENST00000532088 PRSS37A4D1T9 235 aa11.05□□□□□ -0.64
COPB1-208ENST00000532088 H0YAE9 185 aa11.05□□□□□ -0.64
COPB1-208ENST00000532088 RPL36A-HNRNPH2H7BZ11 118 aa11.05□□□□□ -0.64
COPB1-208ENST00000532088 M0R3G1 203 aa11.05□□□□□ -0.64
COPB1-208ENST00000532088 SURF4O15260 269 aa11.05□□□□□ -0.64
COPB1-208ENST00000532088 SERPINI2O75830 405 aa11.05□□□□□ -0.64
COPB1-208ENST00000532088 SNAP29O95721 258 aa11.05□□□□□ -0.64
COPB1-208ENST00000532088 HIST1H1CP16403 213 aaKnown RBP11.05□□□□□ -0.64
COPB1-208ENST00000532088 ACVR1BP36896 505 aa11.05□□□□□ -0.64
COPB1-208ENST00000532088 SELENOPP49908 381 aa11.05□□□□□ -0.64
COPB1-208ENST00000532088 ITGADQ13349 1161 aa11.05□□□□□ -0.64
COPB1-208ENST00000532088 TOP3AQ13472 1001 aaPredicted RBP11.05□□□□□ -0.64
COPB1-208ENST00000532088 MELKQ14680 651 aa11.05□□□□□ -0.64
COPB1-208ENST00000532088 MESTQ5EB52 335 aa11.05□□□□□ -0.64
COPB1-208ENST00000532088 THEM4Q5T1C6 240 aa11.05□□□□□ -0.64
COPB1-208ENST00000532088 C1QTNF12Q5T7M4 302 aa11.05□□□□□ -0.64
COPB1-208ENST00000532088 FBXW9Q5XUX1 488 aa11.05□□□□□ -0.64
COPB1-208ENST00000532088 ACSM5Q6NUN0 579 aa11.05□□□□□ -0.64
COPB1-208ENST00000532088 VWA1Q6PCB0 445 aa11.05□□□□□ -0.64
COPB1-208ENST00000532088 BEND4Q6ZU67 534 aa11.05□□□□□ -0.64
COPB1-208ENST00000532088 MRGPRGQ86SM5 289 aa11.05□□□□□ -0.64
COPB1-208ENST00000532088 FJX1Q86VR8 437 aa11.05□□□□□ -0.64
COPB1-208ENST00000532088 JAZF1Q86VZ6 243 aa11.05□□□□□ -0.64
COPB1-208ENST00000532088 ZNF100Q8IYN0 542 aa11.05□□□□□ -0.64
COPB1-208ENST00000532088 CNEP1R1Q8N9A8 125 aa11.05□□□□□ -0.64
COPB1-208ENST00000532088 ZNF555Q8NEP9 628 aa11.05□□□□□ -0.64
COPB1-208ENST00000532088 HDAC2Q92769 488 aaKnown RBP11.05□□□□□ -0.64
COPB1-208ENST00000532088 DDOQ99489 341 aa11.05□□□□□ -0.64
COPB1-208ENST00000532088 FAM118AQ9NWS6 357 aa11.05□□□□□ -0.64
COPB1-208ENST00000532088 IL20RAQ9UHF4 553 aa11.05□□□□□ -0.64
COPB1-208ENST00000532088 ERRFI1Q9UJM3 462 aaPredicted RBP11.05□□□□□ -0.64
COPB1-208ENST00000532088 RNF6Q9Y252 685 aa11.05□□□□□ -0.64
COPB1-208ENST00000532088 KALRNO60229 2985 aa11.05□□□□□ -0.64
COPB1-208ENST00000532088 ESPL1Q14674 2120 aa11.05□□□□□ -0.64
COPB1-208ENST00000532088 LOC100130705A0A1B0GUX0 176 aa11.04□□□□□ -0.64
COPB1-208ENST00000532088 RIIAD1A6NNX1 92 aa11.04□□□□□ -0.64
COPB1-208ENST00000532088 A8MXE2 369 aa11.04□□□□□ -0.64
COPB1-208ENST00000532088 FAM229AH3BQW9 127 aa11.04□□□□□ -0.64
COPB1-208ENST00000532088 ARHGEF9O43307 516 aa11.04□□□□□ -0.64
COPB1-208ENST00000532088 MPZL2O60487 215 aa11.04□□□□□ -0.64
COPB1-208ENST00000532088 RENP00797 406 aa11.04□□□□□ -0.64
COPB1-208ENST00000532088 ZNF3P17036 446 aa11.04□□□□□ -0.64
COPB1-208ENST00000532088 GGT2P36268 569 aa11.04□□□□□ -0.64
COPB1-208ENST00000532088 POLR2IP36954 125 aaKnown RBP11.04□□□□□ -0.64
COPB1-208ENST00000532088 CSNK1A1P48729 337 aa11.04□□□□□ -0.64
COPB1-208ENST00000532088 SLC25A1P53007 311 aa11.04□□□□□ -0.64
COPB1-208ENST00000532088 CLRN1P58418 232 aa11.04□□□□□ -0.64
COPB1-208ENST00000532088 CDC42P60953 191 aa11.04□□□□□ -0.64
COPB1-208ENST00000532088 SIRPAP78324 504 aa11.04□□□□□ -0.64
COPB1-208ENST00000532088 ADARB1P78563 741 aaKnown RBP11.04□□□□□ -0.64
COPB1-208ENST00000532088 EFNB1P98172 346 aa11.04□□□□□ -0.64
COPB1-208ENST00000532088 IL18R1Q13478 541 aa11.04□□□□□ -0.64
COPB1-208ENST00000532088 CAMK2DQ13557 499 aa11.04□□□□□ -0.64
COPB1-208ENST00000532088 FBXL19-AS1Q494R0 122 aa11.04□□□□□ -0.64
COPB1-208ENST00000532088 NRN1LQ496H8 165 aa11.04□□□□□ -0.64
COPB1-208ENST00000532088 ZNF362Q5T0B9 420 aaPredicted RBP11.04□□□□□ -0.64
COPB1-208ENST00000532088 C10orf128Q5T292 105 aa11.04□□□□□ -0.64
COPB1-208ENST00000532088 DNM1P34Q6PK57 102 aa11.04□□□□□ -0.64
COPB1-208ENST00000532088 XKRXQ6PP77 449 aa11.04□□□□□ -0.64
COPB1-208ENST00000532088 Q6ZT83 130 aa11.04□□□□□ -0.64
COPB1-208ENST00000532088 DHRSXQ8N5I4 330 aa11.04□□□□□ -0.64
COPB1-208ENST00000532088 NPEPL1Q8NDH3 523 aa11.04□□□□□ -0.64
COPB1-208ENST00000532088 LILRB4Q8NHJ6 448 aa11.04□□□□□ -0.64
COPB1-208ENST00000532088 RASD2Q96D21 266 aa11.04□□□□□ -0.64
COPB1-208ENST00000532088 NMD3Q96D46 503 aaKnown RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms