RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 WDR55Q9H6Y2 383 aaPredicted RBP7.85□□□□□ -1.15
NEDD8-206ENST00000531430 EGFL7Q9UHF1 273 aa7.85□□□□□ -1.15
NEDD8-206ENST00000531430 SLC13A4Q9UKG4 626 aa7.85□□□□□ -1.15
NEDD8-206ENST00000531430 AUP1Q9Y679 476 aa7.85□□□□□ -1.15
NEDD8-206ENST00000531430 DSPPQ9NZW4 1301 aa7.84□□□□□ -1.15
NEDD8-206ENST00000531430 IGKV1D-42A0A075B6H8 117 aa7.84□□□□□ -1.15
NEDD8-206ENST00000531430 PLPP3O14495 311 aa7.84□□□□□ -1.15
NEDD8-206ENST00000531430 SLC22A3O75751 556 aa7.84□□□□□ -1.15
NEDD8-206ENST00000531430 PTHP01270 115 aa7.84□□□□□ -1.15
NEDD8-206ENST00000531430 ALDOCP09972 364 aaKnown RBP7.84□□□□□ -1.15
NEDD8-206ENST00000531430 KITP10721 976 aa7.84□□□□□ -1.15
NEDD8-206ENST00000531430 MDKP21741 143 aaPredicted RBP7.84□□□□□ -1.15
NEDD8-206ENST00000531430 BGNP21810 368 aa7.84□□□□□ -1.15
NEDD8-206ENST00000531430 APLNRP35414 380 aa7.84□□□□□ -1.15
NEDD8-206ENST00000531430 RBMXP38159 391 aaKnown RBP7.84□□□□□ -1.15
NEDD8-206ENST00000531430 HSF2Q03933 536 aa7.84□□□□□ -1.15
NEDD8-206ENST00000531430 SLC3A1Q07837 685 aa7.84□□□□□ -1.15
NEDD8-206ENST00000531430 PUDPQ08623 228 aa7.84□□□□□ -1.15
NEDD8-206ENST00000531430 HNRNPA0Q13151 305 aaKnown RBP7.84□□□□□ -1.15
NEDD8-206ENST00000531430 STX3Q13277 289 aa7.84□□□□□ -1.15
NEDD8-206ENST00000531430 MELKQ14680 651 aa7.84□□□□□ -1.15
NEDD8-206ENST00000531430 ZNF718Q3SXZ3 478 aa7.84□□□□□ -1.15
NEDD8-206ENST00000531430 THEM4Q5T1C6 240 aa7.84□□□□□ -1.15
NEDD8-206ENST00000531430 ULK3Q6PHR2 472 aa7.84□□□□□ -1.15
NEDD8-206ENST00000531430 C5orf46Q6UWT4 87 aa7.84□□□□□ -1.15
NEDD8-206ENST00000531430 WDR88Q6ZMY6 472 aa7.84□□□□□ -1.15
NEDD8-206ENST00000531430 C17orf107Q6ZR85 190 aa7.84□□□□□ -1.15
NEDD8-206ENST00000531430 SPATC1Q76KD6 591 aa7.84□□□□□ -1.15
NEDD8-206ENST00000531430 DOK3Q7L591 496 aa7.84□□□□□ -1.15
NEDD8-206ENST00000531430 SLC16A14Q7RTX9 510 aa7.84□□□□□ -1.15
NEDD8-206ENST00000531430 RBM15BQ8NDT2 890 aaKnown RBP7.84□□□□□ -1.15
NEDD8-206ENST00000531430 HIPK4Q8NE63 616 aa7.84□□□□□ -1.15
NEDD8-206ENST00000531430 OR4K5Q8NGD3 323 aa7.84□□□□□ -1.15
NEDD8-206ENST00000531430 ZDHHC16Q969W1 377 aa7.84□□□□□ -1.15
NEDD8-206ENST00000531430 MOGAT1Q96PD6 335 aa7.84□□□□□ -1.15
NEDD8-206ENST00000531430 MRI1Q9BV20 369 aa7.84□□□□□ -1.15
NEDD8-206ENST00000531430 BCL2L14Q9BZR8 327 aa7.84□□□□□ -1.15
NEDD8-206ENST00000531430 EGLN1Q9GZT9 426 aa7.84□□□□□ -1.15
NEDD8-206ENST00000531430 KCNN2Q9H2S1 579 aa7.84□□□□□ -1.15
NEDD8-206ENST00000531430 RMND5AQ9H871 391 aa7.84□□□□□ -1.15
NEDD8-206ENST00000531430 KCNK9Q9NPC2 374 aa7.84□□□□□ -1.15
NEDD8-206ENST00000531430 AIG1Q9NVV5 245 aa7.84□□□□□ -1.15
NEDD8-206ENST00000531430 PLEK2Q9NYT0 353 aa7.84□□□□□ -1.15
NEDD8-206ENST00000531430 GLTPQ9NZD2 209 aa7.84□□□□□ -1.15
NEDD8-206ENST00000531430 KLHL14Q9P2G3 628 aa7.84□□□□□ -1.15
NEDD8-206ENST00000531430 EIF3KQ9UBQ5 218 aaKnown RBP7.84□□□□□ -1.15
NEDD8-206ENST00000531430 LEF1Q9UJU2 399 aaPredicted RBP7.84□□□□□ -1.15
NEDD8-206ENST00000531430 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.84□□□□□ -1.15
NEDD8-206ENST00000531430 SOX21Q9Y651 276 aaPredicted RBP7.84□□□□□ -1.15
NEDD8-206ENST00000531430 VWFP04275 2813 aa7.83□□□□□ -1.16
NEDD8-206ENST00000531430 DHHO43323 396 aa7.83□□□□□ -1.16
NEDD8-206ENST00000531430 RNF13O43567 381 aa7.83□□□□□ -1.16
NEDD8-206ENST00000531430 TPST1O60507 370 aa7.83□□□□□ -1.16
NEDD8-206ENST00000531430 ENTPD5O75356 428 aa7.83□□□□□ -1.16
NEDD8-206ENST00000531430 IGHV1-46P01743 117 aa7.83□□□□□ -1.16
NEDD8-206ENST00000531430 BGLAPP02818 100 aa7.83□□□□□ -1.16
NEDD8-206ENST00000531430 HIST1H2ABP04908 130 aa7.83□□□□□ -1.16
NEDD8-206ENST00000531430 IL6P05231 212 aa7.83□□□□□ -1.16
NEDD8-206ENST00000531430 CRYBA1P05813 215 aa7.83□□□□□ -1.16
NEDD8-206ENST00000531430 QDPRP09417 244 aa7.83□□□□□ -1.16
NEDD8-206ENST00000531430 ZNF250P15622 560 aa7.83□□□□□ -1.16
NEDD8-206ENST00000531430 HTR2AP28223 471 aa7.83□□□□□ -1.16
NEDD8-206ENST00000531430 EPHA3P29320 983 aa7.83□□□□□ -1.16
NEDD8-206ENST00000531430 MVDP53602 400 aa7.83□□□□□ -1.16
NEDD8-206ENST00000531430 CLRN1P58418 232 aa7.83□□□□□ -1.16
NEDD8-206ENST00000531430 ZNF154Q13106 437 aa7.83□□□□□ -1.16
NEDD8-206ENST00000531430 SLC9A3R2Q15599 337 aa7.83□□□□□ -1.16
NEDD8-206ENST00000531430 OR1Q1Q15612 314 aa7.83□□□□□ -1.16
NEDD8-206ENST00000531430 SLC36A2Q495M3 483 aa7.83□□□□□ -1.16
NEDD8-206ENST00000531430 LRFN4Q6PJG9 635 aa7.83□□□□□ -1.16
NEDD8-206ENST00000531430 SLC35D2Q76EJ3 337 aa7.83□□□□□ -1.16
NEDD8-206ENST00000531430 HIST3H2AQ7L7L0 130 aa7.83□□□□□ -1.16
NEDD8-206ENST00000531430 PXKQ7Z7A4 578 aa7.83□□□□□ -1.16
NEDD8-206ENST00000531430 KIR3DL3Q8N743 410 aa7.83□□□□□ -1.16
NEDD8-206ENST00000531430 OR52E2Q8NGJ4 325 aa7.83□□□□□ -1.16
NEDD8-206ENST00000531430 BBS10Q8TAM1 723 aa7.83□□□□□ -1.16
NEDD8-206ENST00000531430 HIST1H2ACQ93077 130 aa7.83□□□□□ -1.16
NEDD8-206ENST00000531430 POP5Q969H6 163 aaKnown RBP7.83□□□□□ -1.16
NEDD8-206ENST00000531430 ZNF566Q969W8 418 aa7.83□□□□□ -1.16
NEDD8-206ENST00000531430 TMIGD2Q96BF3 282 aa7.83□□□□□ -1.16
NEDD8-206ENST00000531430 ITCHQ96J02 903 aa7.83□□□□□ -1.16
NEDD8-206ENST00000531430 ZNF48Q96MX3 618 aaPredicted RBP7.83□□□□□ -1.16
NEDD8-206ENST00000531430 CENPHQ9H3R5 247 aa7.83□□□□□ -1.16
NEDD8-206ENST00000531430 C12orf10Q9HB07 376 aa7.83□□□□□ -1.16
NEDD8-206ENST00000531430 TMEM38BQ9NVV0 291 aa7.83□□□□□ -1.16
NEDD8-206ENST00000531430 THUMPD1Q9NXG2 353 aaKnown RBP7.83□□□□□ -1.16
NEDD8-206ENST00000531430 NKIRAS2Q9NYR9 191 aa7.83□□□□□ -1.16
NEDD8-206ENST00000531430 TESQ9UGI8 421 aaKnown RBP7.83□□□□□ -1.16
NEDD8-206ENST00000531430 TRIM33Q9UPN9 1127 aa7.83□□□□□ -1.16
NEDD8-206ENST00000531430 GPR45Q9Y5Y3 372 aa7.83□□□□□ -1.16
NEDD8-206ENST00000531430 TRRAPQ9Y4A5 3859 aa7.83□□□□□ -1.16
NEDD8-206ENST00000531430 IGLV3-9A0A075B6K5 115 aa7.82□□□□□ -1.16
NEDD8-206ENST00000531430 TRAPPC2LH3BP13 241 aa7.82□□□□□ -1.16
NEDD8-206ENST00000531430 CLIC1O00299 241 aa7.82□□□□□ -1.16
NEDD8-206ENST00000531430 SDHDO14521 159 aa7.82□□□□□ -1.16
NEDD8-206ENST00000531430 CH25HO95992 272 aa7.82□□□□□ -1.16
NEDD8-206ENST00000531430 KNG1P01042 644 aa7.82□□□□□ -1.16
NEDD8-206ENST00000531430 UMPSP11172 480 aa7.82□□□□□ -1.16
NEDD8-206ENST00000531430 ETV4P43268 484 aa7.82□□□□□ -1.16
NEDD8-206ENST00000531430 MTNR1AP48039 350 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms