RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 FAM231BA6NCW3 169 aa3.17□□□□□ -1.9
C11orf88-204ENST00000529661 LSM1O15116 133 aaKnown RBP3.17□□□□□ -1.9
C11orf88-204ENST00000529661 HDAC3O15379 428 aa3.17□□□□□ -1.9
C11orf88-204ENST00000529661 SUPT7LO94864 414 aa3.17□□□□□ -1.9
C11orf88-204ENST00000529661 SERPIND1P05546 499 aa3.17□□□□□ -1.9
C11orf88-204ENST00000529661 CLTAP09496 248 aa3.17□□□□□ -1.9
C11orf88-204ENST00000529661 ABOP16442 354 aa3.17□□□□□ -1.9
C11orf88-204ENST00000529661 ZNF19P17023 458 aa3.17□□□□□ -1.9
C11orf88-204ENST00000529661 CMA1P23946 247 aa3.17□□□□□ -1.9
C11orf88-204ENST00000529661 HNRNPH3P31942 346 aaKnown RBP3.17□□□□□ -1.9
C11orf88-204ENST00000529661 IFNA8P32881 189 aa3.17□□□□□ -1.9
C11orf88-204ENST00000529661 RORAP35398 523 aa3.17□□□□□ -1.9
C11orf88-204ENST00000529661 TFPI2P48307 235 aa3.17□□□□□ -1.9
C11orf88-204ENST00000529661 BCAP31P51572 246 aa3.17□□□□□ -1.9
C11orf88-204ENST00000529661 KCNJ2P63252 427 aa3.17□□□□□ -1.9
C11orf88-204ENST00000529661 ORC2Q13416 577 aaPredicted RBP3.17□□□□□ -1.9
C11orf88-204ENST00000529661 STK38Q15208 465 aa3.17□□□□□ -1.9
C11orf88-204ENST00000529661 IL17AQ16552 155 aa3.17□□□□□ -1.9
C11orf88-204ENST00000529661 HSP90AA4PQ58FG1 418 aa3.17□□□□□ -1.9
C11orf88-204ENST00000529661 MLIPQ5VWP3 458 aa3.17□□□□□ -1.9
C11orf88-204ENST00000529661 DEGS2Q6QHC5 323 aa3.17□□□□□ -1.9
C11orf88-204ENST00000529661 RFLNAQ6ZTI6 216 aa3.17□□□□□ -1.9
C11orf88-204ENST00000529661 ERI1Q8IV48 349 aaKnown RBP3.17□□□□□ -1.9
C11orf88-204ENST00000529661 SYCE1Q8N0S2 351 aa3.17□□□□□ -1.9
C11orf88-204ENST00000529661 FAM58AQ8N1B3 248 aa3.17□□□□□ -1.9
C11orf88-204ENST00000529661 PNKDQ8N490 385 aa3.17□□□□□ -1.9
C11orf88-204ENST00000529661 ACOT4Q8N9L9 421 aa3.17□□□□□ -1.9
C11orf88-204ENST00000529661 ZNF740Q8NDX6 193 aa3.17□□□□□ -1.9
C11orf88-204ENST00000529661 LINC01006Q8NI28 216 aa3.17□□□□□ -1.9
C11orf88-204ENST00000529661 FRAT1Q92837 279 aaPredicted RBP3.17□□□□□ -1.9
C11orf88-204ENST00000529661 TOP1MTQ969P6 601 aa3.17□□□□□ -1.9
C11orf88-204ENST00000529661 CYYR1Q96J86 154 aa3.17□□□□□ -1.9
C11orf88-204ENST00000529661 SORT1Q99523 831 aa3.17□□□□□ -1.9
C11orf88-204ENST00000529661 SH3GL1Q99961 368 aa3.17□□□□□ -1.9
C11orf88-204ENST00000529661 PAIP2Q9BPZ3 127 aaKnown RBP3.17□□□□□ -1.9
C11orf88-204ENST00000529661 C8orf33Q9H7E9 229 aaPredicted RBP3.17□□□□□ -1.9
C11orf88-204ENST00000529661 SLC25A22Q9H936 323 aa3.17□□□□□ -1.9
C11orf88-204ENST00000529661 LYRM4Q9HD34 91 aa3.17□□□□□ -1.9
C11orf88-204ENST00000529661 LYARQ9NX58 379 aaKnown RBP3.17□□□□□ -1.9
C11orf88-204ENST00000529661 AHSPQ9NZD4 102 aa3.17□□□□□ -1.9
C11orf88-204ENST00000529661 KCNIP1Q9NZI2 227 aa3.17□□□□□ -1.9
C11orf88-204ENST00000529661 CLCF1Q9UBD9 225 aa3.17□□□□□ -1.9
C11orf88-204ENST00000529661 RHBDD3Q9Y3P4 386 aa3.17□□□□□ -1.9
C11orf88-204ENST00000529661 CDH10Q9Y6N8 788 aa3.17□□□□□ -1.9
C11orf88-204ENST00000529661 CROCCQ5TZA2 2017 aa3.17□□□□□ -1.9
C11orf88-204ENST00000529661 PLEKHG1Q9ULL1 1385 aa3.16□□□□□ -1.9
C11orf88-204ENST00000529661 CCL21O00585 134 aa3.16□□□□□ -1.9
C11orf88-204ENST00000529661 PSTPIP1O43586 416 aa3.16□□□□□ -1.9
C11orf88-204ENST00000529661 MBP02144 154 aa3.16□□□□□ -1.9
C11orf88-204ENST00000529661 HPNP05981 417 aa3.16□□□□□ -1.9
C11orf88-204ENST00000529661 ZNF43P17038 809 aa3.16□□□□□ -1.9
C11orf88-204ENST00000529661 STOMP27105 288 aa3.16□□□□□ -1.9
C11orf88-204ENST00000529661 BTCP35070 178 aa3.16□□□□□ -1.9
C11orf88-204ENST00000529661 DRD3P35462 400 aa3.16□□□□□ -1.9
C11orf88-204ENST00000529661 VDAC2P45880 294 aaPredicted RBP3.16□□□□□ -1.9
C11orf88-204ENST00000529661 NPBWR2P48146 333 aa3.16□□□□□ -1.9
C11orf88-204ENST00000529661 ACLYP53396 1101 aa3.16□□□□□ -1.9
C11orf88-204ENST00000529661 CLDN18P56856 261 aa3.16□□□□□ -1.9
C11orf88-204ENST00000529661 TAS2R19P59542 299 aa3.16□□□□□ -1.9
C11orf88-204ENST00000529661 YWHAEP62258 255 aaKnown RBP3.16□□□□□ -1.9
C11orf88-204ENST00000529661 GNB2P62879 340 aa3.16□□□□□ -1.9
C11orf88-204ENST00000529661 XIAPP98170 497 aa3.16□□□□□ -1.9
C11orf88-204ENST00000529661 PDIA2Q13087 525 aaKnown RBP3.16□□□□□ -1.9
C11orf88-204ENST00000529661 ZNF829Q3KNS6 432 aaPredicted RBP3.16□□□□□ -1.9
C11orf88-204ENST00000529661 BEX5Q5H9J7 111 aa3.16□□□□□ -1.9
C11orf88-204ENST00000529661 GPR157Q5UAW9 335 aa3.16□□□□□ -1.9
C11orf88-204ENST00000529661 SLC8B1Q6J4K2 584 aa3.16□□□□□ -1.9
C11orf88-204ENST00000529661 ERICH5Q6P6B1 374 aa3.16□□□□□ -1.9
C11orf88-204ENST00000529661 ZNF546Q86UE3 836 aa3.16□□□□□ -1.9
C11orf88-204ENST00000529661 ERO1BQ86YB8 467 aa3.16□□□□□ -1.9
C11orf88-204ENST00000529661 PLPPR1Q8TBJ4 325 aa3.16□□□□□ -1.9
C11orf88-204ENST00000529661 SMARCD2Q92925 531 aa3.16□□□□□ -1.9
C11orf88-204ENST00000529661 STMN2Q93045 179 aa3.16□□□□□ -1.9
C11orf88-204ENST00000529661 UCN3Q969E3 161 aa3.16□□□□□ -1.9
C11orf88-204ENST00000529661 RPUSD4Q96CM3 377 aaKnown RBP3.16□□□□□ -1.9
C11orf88-204ENST00000529661 OR8B4Q96RC9 309 aa3.16□□□□□ -1.9
C11orf88-204ENST00000529661 NRIP2Q9BQI9 281 aa3.16□□□□□ -1.9
C11orf88-204ENST00000529661 PELOQ9BRX2 385 aaKnown RBP3.16□□□□□ -1.9
C11orf88-204ENST00000529661 TMEM175Q9BSA9 504 aa3.16□□□□□ -1.9
C11orf88-204ENST00000529661 NAT9Q9BTE0 207 aa3.16□□□□□ -1.9
C11orf88-204ENST00000529661 TEKT3Q9BXF9 490 aa3.16□□□□□ -1.9
C11orf88-204ENST00000529661 RANBP3Q9H6Z4 567 aaPredicted RBP3.16□□□□□ -1.9
C11orf88-204ENST00000529661 SYNDIG1Q9H7V2 258 aa3.16□□□□□ -1.9
C11orf88-204ENST00000529661 QPCTLQ9NXS2 382 aa3.16□□□□□ -1.9
C11orf88-204ENST00000529661 MTCH1Q9NZJ7 389 aa3.16□□□□□ -1.9
C11orf88-204ENST00000529661 NYAP2Q9P242 653 aa3.16□□□□□ -1.9
C11orf88-204ENST00000529661 NUP50Q9UKX7 468 aa3.16□□□□□ -1.9
C11orf88-204ENST00000529661 MMP17Q9ULZ9 603 aa3.16□□□□□ -1.9
C11orf88-204ENST00000529661 AK9Q5TCS8 1911 aa3.16□□□□□ -1.9
C11orf88-204ENST00000529661 NEURL4Q96JN8 1562 aa3.16□□□□□ -1.9
C11orf88-204ENST00000529661 A0A0G2JLM5 398 aa3.15□□□□□ -1.91
C11orf88-204ENST00000529661 GSTTP1A0A1W2PQM5 241 aa3.15□□□□□ -1.91
C11orf88-204ENST00000529661 ERICH2A1L162 156 aa3.15□□□□□ -1.91
C11orf88-204ENST00000529661 USP27XA6NNY8 438 aa3.15□□□□□ -1.91
C11orf88-204ENST00000529661 C12orf71A8MTZ7 269 aa3.15□□□□□ -1.91
C11orf88-204ENST00000529661 A8MUA0 341 aa3.15□□□□□ -1.91
C11orf88-204ENST00000529661 C12orf77C9JDV5 145 aa3.15□□□□□ -1.91
C11orf88-204ENST00000529661 DLGAP1O14490 977 aa3.15□□□□□ -1.91
C11orf88-204ENST00000529661 CLOCKO15516 846 aa3.15□□□□□ -1.91
C11orf88-204ENST00000529661 RRP8O43159 456 aaKnown RBP3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms