RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 GNGT1P63211 74 aa28.62■■■□□ 2.17
SSSCA1-205ENST00000527920 TAF11Q15544 211 aa28.62■■■□□ 2.17
SSSCA1-205ENST00000527920 ANKDD1AQ495B1 522 aa28.62■■■□□ 2.17
SSSCA1-205ENST00000527920 ARMC4Q5T2S8 1044 aa28.62■■■□□ 2.17
SSSCA1-205ENST00000527920 SLC22A24Q8N4F4 322 aa28.62■■■□□ 2.17
SSSCA1-205ENST00000527920 MOSPD2Q8NHP6 518 aa28.62■■■□□ 2.17
SSSCA1-205ENST00000527920 PLK3Q9H4B4 646 aa28.62■■■□□ 2.17
SSSCA1-205ENST00000527920 J3KTA2 159 aa28.61■■■□□ 2.17
SSSCA1-205ENST00000527920 MGRN1O60291 552 aa28.61■■■□□ 2.17
SSSCA1-205ENST00000527920 RAB36O95755 333 aa28.61■■■□□ 2.17
SSSCA1-205ENST00000527920 CSF3P09919 207 aa28.61■■■□□ 2.17
SSSCA1-205ENST00000527920 ACADSP16219 412 aa28.61■■■□□ 2.17
SSSCA1-205ENST00000527920 YAP1P46937 504 aaKnown RBP28.61■■■□□ 2.17
SSSCA1-205ENST00000527920 RAB1AP62820 205 aa28.61■■■□□ 2.17
SSSCA1-205ENST00000527920 RUNX1T1Q06455 604 aa28.61■■■□□ 2.17
SSSCA1-205ENST00000527920 ACOT11Q8WXI4 607 aaPredicted RBP28.61■■■□□ 2.17
SSSCA1-205ENST00000527920 ARL2BPQ9Y2Y0 163 aa28.61■■■□□ 2.17
SSSCA1-205ENST00000527920 ARFGEF3Q5TH69 2177 aa28.61■■■□□ 2.17
SSSCA1-205ENST00000527920 FARS2O95363 451 aaKnown RBP28.6■■■□□ 2.17
SSSCA1-205ENST00000527920 GIPRP48546 466 aa28.6■■■□□ 2.17
SSSCA1-205ENST00000527920 PRKCDQ05655 676 aa28.6■■■□□ 2.17
SSSCA1-205ENST00000527920 PIGFQ07326 219 aa28.6■■■□□ 2.17
SSSCA1-205ENST00000527920 ALG10Q5BKT4 473 aa28.6■■■□□ 2.17
SSSCA1-205ENST00000527920 PIGWQ7Z7B1 504 aa28.6■■■□□ 2.17
SSSCA1-205ENST00000527920 CYP4Z1Q86W10 505 aa28.6■■■□□ 2.17
SSSCA1-205ENST00000527920 SKA3Q8IX90 412 aa28.6■■■□□ 2.17
SSSCA1-205ENST00000527920 MCHR2Q969V1 340 aa28.6■■■□□ 2.17
SSSCA1-205ENST00000527920 TXNIPQ9H3M7 391 aa28.6■■■□□ 2.17
SSSCA1-205ENST00000527920 SMURF2Q9HAU4 748 aa28.6■■■□□ 2.17
SSSCA1-205ENST00000527920 RHCGQ9UBD6 479 aa28.6■■■□□ 2.17
SSSCA1-205ENST00000527920 ENPP4Q9Y6X5 453 aa28.6■■■□□ 2.17
SSSCA1-205ENST00000527920 TRMUO75648 421 aaKnown RBP28.59■■■□□ 2.17
SSSCA1-205ENST00000527920 F12P00748 615 aaPredicted RBP28.59■■■□□ 2.17
SSSCA1-205ENST00000527920 NR2C1P13056 603 aa28.59■■■□□ 2.17
SSSCA1-205ENST00000527920 NCK1P16333 377 aa28.59■■■□□ 2.17
SSSCA1-205ENST00000527920 FUT4P22083 530 aa28.59■■■□□ 2.17
SSSCA1-205ENST00000527920 PTDSS1P48651 473 aaKnown RBP28.59■■■□□ 2.17
SSSCA1-205ENST00000527920 LSM11P83369 360 aaKnown RBP eCLIP28.59■■■□□ 2.17
SSSCA1-205ENST00000527920 LAPTM4AQ15012 233 aa28.59■■■□□ 2.17
SSSCA1-205ENST00000527920 FXNQ16595 210 aa28.59■■■□□ 2.17
SSSCA1-205ENST00000527920 C10orf128Q5T292 105 aa28.59■■■□□ 2.17
SSSCA1-205ENST00000527920 VHLLQ6RSH7 139 aa28.59■■■□□ 2.17
SSSCA1-205ENST00000527920 NRMQ8IXM6 262 aa28.59■■■□□ 2.17
SSSCA1-205ENST00000527920 MS4A3Q96HJ5 214 aa28.59■■■□□ 2.17
SSSCA1-205ENST00000527920 ZNF347Q96SE7 839 aa28.59■■■□□ 2.17
SSSCA1-205ENST00000527920 IGHMP01871 453 aa28.58■■■□□ 2.17
SSSCA1-205ENST00000527920 ZNF35P13682 527 aa28.58■■■□□ 2.17
SSSCA1-205ENST00000527920 NPR2P20594 1047 aa28.58■■■□□ 2.17
SSSCA1-205ENST00000527920 NR4A1P22736 598 aa28.58■■■□□ 2.17
SSSCA1-205ENST00000527920 THBS4P35443 961 aa28.58■■■□□ 2.17
SSSCA1-205ENST00000527920 ZNF84P51523 738 aa28.58■■■□□ 2.17
SSSCA1-205ENST00000527920 GYS2P54840 703 aa28.58■■■□□ 2.17
SSSCA1-205ENST00000527920 KRTAP1-1Q07627 177 aa28.58■■■□□ 2.17
SSSCA1-205ENST00000527920 DAG1Q14118 895 aa28.58■■■□□ 2.17
SSSCA1-205ENST00000527920 MBOAT2Q6ZWT7 520 aa28.58■■■□□ 2.17
SSSCA1-205ENST00000527920 FAM156AQ8NDB6 213 aa28.58■■■□□ 2.17
SSSCA1-205ENST00000527920 NMD3Q96D46 503 aaKnown RBP28.58■■■□□ 2.17
SSSCA1-205ENST00000527920 DCAF13Q9NV06 445 aaKnown RBP28.58■■■□□ 2.17
SSSCA1-205ENST00000527920 ADA2Q9NZK5 511 aa28.58■■■□□ 2.17
SSSCA1-205ENST00000527920 SAMD4AQ9UPU9 718 aaKnown RBP28.58■■■□□ 2.17
SSSCA1-205ENST00000527920 SPEF1Q9Y4P9 236 aa28.58■■■□□ 2.17
SSSCA1-205ENST00000527920 FKBP7Q9Y680 259 aa28.58■■■□□ 2.17
SSSCA1-205ENST00000527920 IGHV4-30-2A0A087WSY4 118 aa28.57■■■□□ 2.16
SSSCA1-205ENST00000527920 A0A087WUU8 490 aa28.57■■■□□ 2.16
SSSCA1-205ENST00000527920 SAGP10523 405 aaPredicted RBP28.57■■■□□ 2.16
SSSCA1-205ENST00000527920 MAKP20794 623 aa28.57■■■□□ 2.16
SSSCA1-205ENST00000527920 SLC9A3P48764 834 aa28.57■■■□□ 2.16
SSSCA1-205ENST00000527920 PPOXP50336 477 aa28.57■■■□□ 2.16
SSSCA1-205ENST00000527920 FAM205BPQ63HN1 556 aa28.57■■■□□ 2.16
SSSCA1-205ENST00000527920 GLYATQ6IB77 296 aa28.57■■■□□ 2.16
SSSCA1-205ENST00000527920 TSEN54Q7Z6J9 526 aaKnown RBP28.57■■■□□ 2.16
SSSCA1-205ENST00000527920 ZNF525Q8N782 197 aa28.57■■■□□ 2.16
SSSCA1-205ENST00000527920 HTRA1Q92743 480 aa28.57■■■□□ 2.16
SSSCA1-205ENST00000527920 LRRC37BQ96QE4 947 aa28.57■■■□□ 2.16
SSSCA1-205ENST00000527920 NMNAT1Q9HAN9 279 aaPredicted RBP28.57■■■□□ 2.16
SSSCA1-205ENST00000527920 EGFL7Q9UHF1 273 aa28.57■■■□□ 2.16
SSSCA1-205ENST00000527920 GMNNO75496 209 aa28.56■■■□□ 2.16
SSSCA1-205ENST00000527920 DCTN3O75935 186 aa28.56■■■□□ 2.16
SSSCA1-205ENST00000527920 SERPINA5P05154 406 aa28.56■■■□□ 2.16
SSSCA1-205ENST00000527920 HSD17B1P14061 328 aa28.56■■■□□ 2.16
SSSCA1-205ENST00000527920 SLC25A16P16260 332 aa28.56■■■□□ 2.16
SSSCA1-205ENST00000527920 SNTB2Q13425 540 aaKnown RBP28.56■■■□□ 2.16
SSSCA1-205ENST00000527920 ZNF730Q6ZMV8 503 aa28.56■■■□□ 2.16
SSSCA1-205ENST00000527920 CDK20Q8IZL9 346 aa28.56■■■□□ 2.16
SSSCA1-205ENST00000527920 PGAM4Q8N0Y7 254 aa28.56■■■□□ 2.16
SSSCA1-205ENST00000527920 SYT14Q8NB59 555 aa28.56■■■□□ 2.16
SSSCA1-205ENST00000527920 OR4K5Q8NGD3 323 aa28.56■■■□□ 2.16
SSSCA1-205ENST00000527920 FNDC8Q8TC99 324 aa28.56■■■□□ 2.16
SSSCA1-205ENST00000527920 KCNK17Q96T54 332 aa28.56■■■□□ 2.16
SSSCA1-205ENST00000527920 ALG12Q9BV10 488 aa28.56■■■□□ 2.16
SSSCA1-205ENST00000527920 GORASP2Q9H8Y8 452 aa28.56■■■□□ 2.16
SSSCA1-205ENST00000527920 A0A096LNT2 108 aa28.55■■■□□ 2.16
SSSCA1-205ENST00000527920 A0A1W2PRQ8 180 aa28.55■■■□□ 2.16
SSSCA1-205ENST00000527920 EFCAB9A8MZ26 197 aa28.55■■■□□ 2.16
SSSCA1-205ENST00000527920 FHL1Q13642 323 aa28.55■■■□□ 2.16
SSSCA1-205ENST00000527920 DGCR6Q14129 220 aa28.55■■■□□ 2.16
SSSCA1-205ENST00000527920 TMPRSS11FQ6ZWK6 438 aa28.55■■■□□ 2.16
SSSCA1-205ENST00000527920 OAFQ86UD1 273 aa28.55■■■□□ 2.16
SSSCA1-205ENST00000527920 LRRC75AQ8NAA5 344 aa28.55■■■□□ 2.16
SSSCA1-205ENST00000527920 FGFBP3Q8TAT2 258 aa28.55■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms