RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 VHLLQ6RSH7 139 aa12.29□□□□□ -0.44
CAPN1-212ENST00000527887 CXXC5Q7LFL8 322 aaKnown RBP12.29□□□□□ -0.44
CAPN1-212ENST00000527887 DPPA2Q7Z7J5 298 aa12.29□□□□□ -0.44
CAPN1-212ENST00000527887 KCNK17Q96T54 332 aa12.29□□□□□ -0.44
CAPN1-212ENST00000527887 MDFIQ99750 246 aa12.29□□□□□ -0.44
CAPN1-212ENST00000527887 FOXB1Q99853 325 aa12.29□□□□□ -0.44
CAPN1-212ENST00000527887 ZNF426Q9BUY5 554 aa12.29□□□□□ -0.44
CAPN1-212ENST00000527887 DCLRE1BQ9H816 532 aa12.29□□□□□ -0.44
CAPN1-212ENST00000527887 NANOGQ9H9S0 305 aa12.29□□□□□ -0.44
CAPN1-212ENST00000527887 ADA2Q9NZK5 511 aa12.29□□□□□ -0.44
CAPN1-212ENST00000527887 BAG5Q9UL15 447 aa12.29□□□□□ -0.44
CAPN1-212ENST00000527887 POMPQ9Y244 141 aa12.29□□□□□ -0.44
CAPN1-212ENST00000527887 CMAHPQ9Y471 501 aa12.29□□□□□ -0.44
CAPN1-212ENST00000527887 HEATR1Q9H583 2144 aaKnown RBP12.29□□□□□ -0.44
CAPN1-212ENST00000527887 CPSF4LA6NMK7 179 aaKnown RBP12.28□□□□□ -0.44
CAPN1-212ENST00000527887 hCG_2039718K7EN88 272 aa12.28□□□□□ -0.44
CAPN1-212ENST00000527887 ACOT8O14734 319 aa12.28□□□□□ -0.44
CAPN1-212ENST00000527887 FKBP6O75344 327 aa12.28□□□□□ -0.44
CAPN1-212ENST00000527887 HLA-HP01893 362 aa12.28□□□□□ -0.44
CAPN1-212ENST00000527887 OPN1SWP03999 348 aa12.28□□□□□ -0.44
CAPN1-212ENST00000527887 CELA3BP08861 270 aa12.28□□□□□ -0.44
CAPN1-212ENST00000527887 FAM157CP0CG43 387 aa12.28□□□□□ -0.44
CAPN1-212ENST00000527887 IGHV4-31P0DP07 118 aa12.28□□□□□ -0.44
CAPN1-212ENST00000527887 NR4A1P22736 598 aa12.28□□□□□ -0.44
CAPN1-212ENST00000527887 THBS2P35442 1172 aa12.28□□□□□ -0.44
CAPN1-212ENST00000527887 GZMMP51124 257 aa12.28□□□□□ -0.44
CAPN1-212ENST00000527887 C1orf146Q5VVC0 180 aa12.28□□□□□ -0.44
CAPN1-212ENST00000527887 ERICH5Q6P6B1 374 aa12.28□□□□□ -0.44
CAPN1-212ENST00000527887 SLC35D2Q76EJ3 337 aa12.28□□□□□ -0.44
CAPN1-212ENST00000527887 TMEM54Q969K7 222 aa12.28□□□□□ -0.44
CAPN1-212ENST00000527887 ZNF566Q969W8 418 aa12.28□□□□□ -0.44
CAPN1-212ENST00000527887 TAMM41Q96BW9 452 aa12.28□□□□□ -0.44
CAPN1-212ENST00000527887 SLC25A44Q96H78 314 aaPredicted RBP12.28□□□□□ -0.44
CAPN1-212ENST00000527887 ECSITQ9BQ95 431 aa12.28□□□□□ -0.44
CAPN1-212ENST00000527887 NOX3Q9HBY0 568 aa12.28□□□□□ -0.44
CAPN1-212ENST00000527887 TAS2R5Q9NYW4 299 aa12.28□□□□□ -0.44
CAPN1-212ENST00000527887 GLTPQ9NZD2 209 aa12.28□□□□□ -0.44
CAPN1-212ENST00000527887 SLC7A7Q9UM01 511 aa12.28□□□□□ -0.44
CAPN1-212ENST00000527887 TMEM129A0AVI4 362 aa12.27□□□□□ -0.45
CAPN1-212ENST00000527887 HTR3EA5X5Y0 456 aa12.27□□□□□ -0.45
CAPN1-212ENST00000527887 ZNF503-AS2A6NEH8 195 aa12.27□□□□□ -0.45
CAPN1-212ENST00000527887 CENPBD1B2RD01 187 aa12.27□□□□□ -0.45
CAPN1-212ENST00000527887 LRRN3E7EW58 273 aa12.27□□□□□ -0.45
CAPN1-212ENST00000527887 RNF13O43567 381 aa12.27□□□□□ -0.45
CAPN1-212ENST00000527887 LMX1BO60663 402 aa12.27□□□□□ -0.45
CAPN1-212ENST00000527887 LY6HO94772 140 aa12.27□□□□□ -0.45
CAPN1-212ENST00000527887 LYPD3O95274 346 aa12.27□□□□□ -0.45
CAPN1-212ENST00000527887 RAB36O95755 333 aa12.27□□□□□ -0.45
CAPN1-212ENST00000527887 CH25HO95992 272 aa12.27□□□□□ -0.45
CAPN1-212ENST00000527887 THY1P04216 161 aa12.27□□□□□ -0.45
CAPN1-212ENST00000527887 ASAH2BP0C7U1 165 aa12.27□□□□□ -0.45
CAPN1-212ENST00000527887 ZNF35P13682 527 aa12.27□□□□□ -0.45
CAPN1-212ENST00000527887 IFNGR1P15260 489 aa12.27□□□□□ -0.45
CAPN1-212ENST00000527887 ZNF14P17017 642 aaPredicted RBP12.27□□□□□ -0.45
CAPN1-212ENST00000527887 HOXB6P17509 224 aaKnown RBP12.27□□□□□ -0.45
CAPN1-212ENST00000527887 GLRXP35754 106 aa12.27□□□□□ -0.45
CAPN1-212ENST00000527887 RBM34P42696 430 aaKnown RBP12.27□□□□□ -0.45
CAPN1-212ENST00000527887 SLC7A2P52569 658 aa12.27□□□□□ -0.45
CAPN1-212ENST00000527887 BIDP55957 195 aa12.27□□□□□ -0.45
CAPN1-212ENST00000527887 RPS23P62266 143 aaKnown RBP12.27□□□□□ -0.45
CAPN1-212ENST00000527887 RAB1AP62820 205 aa12.27□□□□□ -0.45
CAPN1-212ENST00000527887 SNTB2Q13425 540 aaKnown RBP12.27□□□□□ -0.45
CAPN1-212ENST00000527887 NRN1LQ496H8 165 aa12.27□□□□□ -0.45
CAPN1-212ENST00000527887 UGT2A3Q6UWM9 527 aa12.27□□□□□ -0.45
CAPN1-212ENST00000527887 HDDC2Q7Z4H3 204 aa12.27□□□□□ -0.45
CAPN1-212ENST00000527887 CALHM3Q86XJ0 350 aa12.27□□□□□ -0.45
CAPN1-212ENST00000527887 OR4D11Q8NGI4 311 aa12.27□□□□□ -0.45
CAPN1-212ENST00000527887 VANGL1Q8TAA9 524 aaPredicted RBP12.27□□□□□ -0.45
CAPN1-212ENST00000527887 CLPTM1LQ96KA5 538 aa12.27□□□□□ -0.45
CAPN1-212ENST00000527887 ZNF75AQ96N20 296 aa12.27□□□□□ -0.45
CAPN1-212ENST00000527887 FOXN4Q96NZ1 517 aa12.27□□□□□ -0.45
CAPN1-212ENST00000527887 BEX2Q9BXY8 128 aa12.27□□□□□ -0.45
CAPN1-212ENST00000527887 MS4A5Q9H3V2 200 aa12.27□□□□□ -0.45
CAPN1-212ENST00000527887 SEC61A2Q9H9S3 476 aa12.27□□□□□ -0.45
CAPN1-212ENST00000527887 CMTM6Q9NX76 183 aa12.27□□□□□ -0.45
CAPN1-212ENST00000527887 STAB1Q9NY15 2570 aa12.26□□□□□ -0.45
CAPN1-212ENST00000527887 SLC22A23A1A5C7 686 aa12.26□□□□□ -0.45
CAPN1-212ENST00000527887 C11orf98E9PRG8 122 aa12.26□□□□□ -0.45
CAPN1-212ENST00000527887 NME4O00746 187 aa12.26□□□□□ -0.45
CAPN1-212ENST00000527887 FARS2O95363 451 aaKnown RBP12.26□□□□□ -0.45
CAPN1-212ENST00000527887 STAMBPO95630 424 aa12.26□□□□□ -0.45
CAPN1-212ENST00000527887 BCL10O95999 233 aa12.26□□□□□ -0.45
CAPN1-212ENST00000527887 OR8G3PP0DMU2 310 aa12.26□□□□□ -0.45
CAPN1-212ENST00000527887 THRBP10828 461 aa12.26□□□□□ -0.45
CAPN1-212ENST00000527887 ZNF23P17027 643 aa12.26□□□□□ -0.45
CAPN1-212ENST00000527887 GIFP27352 417 aa12.26□□□□□ -0.45
CAPN1-212ENST00000527887 GGTLC2Q14390 218 aa12.26□□□□□ -0.45
CAPN1-212ENST00000527887 KPNB1Q14974 876 aaKnown RBP12.26□□□□□ -0.45
CAPN1-212ENST00000527887 IQCCQ4KMZ1 466 aa12.26□□□□□ -0.45
CAPN1-212ENST00000527887 FAM166AQ6J272 317 aa12.26□□□□□ -0.45
CAPN1-212ENST00000527887 WDR88Q6ZMY6 472 aa12.26□□□□□ -0.45
CAPN1-212ENST00000527887 MYPOPQ86VE0 399 aaPredicted RBP12.26□□□□□ -0.45
CAPN1-212ENST00000527887 RBM45Q8IUH3 476 aaKnown RBP12.26□□□□□ -0.45
CAPN1-212ENST00000527887 ZNF786Q8N393 782 aa12.26□□□□□ -0.45
CAPN1-212ENST00000527887 SVOPLQ8N434 492 aa12.26□□□□□ -0.45
CAPN1-212ENST00000527887 STMN2Q93045 179 aa12.26□□□□□ -0.45
CAPN1-212ENST00000527887 MRPL24Q96A35 216 aaKnown RBP12.26□□□□□ -0.45
CAPN1-212ENST00000527887 SHARPINQ9H0F6 387 aa12.26□□□□□ -0.45
CAPN1-212ENST00000527887 C1orf198Q9H425 327 aa12.26□□□□□ -0.45
CAPN1-212ENST00000527887 DYNLRB1Q9NP97 96 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms