RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 OR4K13Q8NH42 304 aa9.45□□□□□ -0.9
NEDD8-205ENST00000527046 FGFBP3Q8TAT2 258 aa9.45□□□□□ -0.9
NEDD8-205ENST00000527046 LINC01560Q8TB33 94 aa9.45□□□□□ -0.9
NEDD8-205ENST00000527046 FANK1Q8TC84 345 aa9.45□□□□□ -0.9
NEDD8-205ENST00000527046 MAGEE2Q8TD90 523 aaPredicted RBP9.45□□□□□ -0.9
NEDD8-205ENST00000527046 HTRA1Q92743 480 aa9.45□□□□□ -0.9
NEDD8-205ENST00000527046 PTP4A1Q93096 173 aa9.45□□□□□ -0.9
NEDD8-205ENST00000527046 ZNF566Q969W8 418 aa9.45□□□□□ -0.9
NEDD8-205ENST00000527046 ZNF75AQ96N20 296 aa9.45□□□□□ -0.9
NEDD8-205ENST00000527046 ALKBH3Q96Q83 286 aaPredicted RBP9.45□□□□□ -0.9
NEDD8-205ENST00000527046 NMNAT3Q96T66 252 aa9.45□□□□□ -0.9
NEDD8-205ENST00000527046 IFT27Q9BW83 186 aa9.45□□□□□ -0.9
NEDD8-205ENST00000527046 NMNAT2Q9BZQ4 307 aa9.45□□□□□ -0.9
NEDD8-205ENST00000527046 CRLF2Q9HC73 371 aa9.45□□□□□ -0.9
NEDD8-205ENST00000527046 KRCC1Q9NPI7 259 aaPredicted RBP9.45□□□□□ -0.9
NEDD8-205ENST00000527046 ASB6Q9NWX5 421 aa9.45□□□□□ -0.9
NEDD8-205ENST00000527046 VSX1Q9NZR4 365 aaPredicted RBP9.45□□□□□ -0.9
NEDD8-205ENST00000527046 GRHPRQ9UBQ7 328 aa9.45□□□□□ -0.9
NEDD8-205ENST00000527046 GPR52Q9Y2T5 361 aa9.45□□□□□ -0.9
NEDD8-205ENST00000527046 USP9YO00507 2555 aaPredicted RBP9.44□□□□□ -0.9
NEDD8-205ENST00000527046 PRSS37A4D1T9 235 aa9.44□□□□□ -0.9
NEDD8-205ENST00000527046 ZAR1LA6NP61 321 aa9.44□□□□□ -0.9
NEDD8-205ENST00000527046 C16orf97H3BN30 126 aa9.44□□□□□ -0.9
NEDD8-205ENST00000527046 SIAH2O43255 324 aa9.44□□□□□ -0.9
NEDD8-205ENST00000527046 DHHO43323 396 aa9.44□□□□□ -0.9
NEDD8-205ENST00000527046 CTLA4P16410 223 aa9.44□□□□□ -0.9
NEDD8-205ENST00000527046 LOXP28300 417 aaPredicted RBP9.44□□□□□ -0.9
NEDD8-205ENST00000527046 CSNK1A1P48729 337 aa9.44□□□□□ -0.9
NEDD8-205ENST00000527046 ARHGDIAP52565 204 aa9.44□□□□□ -0.9
NEDD8-205ENST00000527046 KRR1Q13601 381 aaKnown RBP9.44□□□□□ -0.9
NEDD8-205ENST00000527046 STK11Q15831 433 aa9.44□□□□□ -0.9
NEDD8-205ENST00000527046 CEACAM16Q2WEN9 425 aa9.44□□□□□ -0.9
NEDD8-205ENST00000527046 SLC35F1Q5T1Q4 408 aa9.44□□□□□ -0.9
NEDD8-205ENST00000527046 OGFRL1Q5TC84 451 aaPredicted RBP9.44□□□□□ -0.9
NEDD8-205ENST00000527046 RPL13AP3Q6NVV1 102 aa9.44□□□□□ -0.9
NEDD8-205ENST00000527046 BHLHA15Q7RTS1 189 aaPredicted RBP9.44□□□□□ -0.9
NEDD8-205ENST00000527046 ZNF295-AS1Q8N0V1 137 aa9.44□□□□□ -0.9
NEDD8-205ENST00000527046 OR6V1Q8N148 313 aa9.44□□□□□ -0.9
NEDD8-205ENST00000527046 UBE2J2Q8N2K1 259 aa9.44□□□□□ -0.9
NEDD8-205ENST00000527046 OR1K1Q8NGR3 316 aa9.44□□□□□ -0.9
NEDD8-205ENST00000527046 NABP1Q96AH0 204 aa9.44□□□□□ -0.9
NEDD8-205ENST00000527046 S100PBPQ96BU1 408 aa9.44□□□□□ -0.9
NEDD8-205ENST00000527046 ZNF570Q96NI8 536 aa9.44□□□□□ -0.9
NEDD8-205ENST00000527046 TSSK2Q96PF2 358 aa9.44□□□□□ -0.9
NEDD8-205ENST00000527046 SNX18Q96RF0 628 aa9.44□□□□□ -0.9
NEDD8-205ENST00000527046 MBOAT4Q96T53 435 aa9.44□□□□□ -0.9
NEDD8-205ENST00000527046 ALG12Q9BV10 488 aa9.44□□□□□ -0.9
NEDD8-205ENST00000527046 RBM4Q9BWF3 364 aaKnown RBP9.44□□□□□ -0.9
NEDD8-205ENST00000527046 HCAR1Q9BXC0 346 aa9.44□□□□□ -0.9
NEDD8-205ENST00000527046 GABARAPL3Q9BY60 117 aa9.44□□□□□ -0.9
NEDD8-205ENST00000527046 NUAK2Q9H093 628 aa9.44□□□□□ -0.9
NEDD8-205ENST00000527046 OR10A4Q9H209 315 aa9.44□□□□□ -0.9
NEDD8-205ENST00000527046 DCLRE1BQ9H816 532 aa9.44□□□□□ -0.9
NEDD8-205ENST00000527046 SLC25A19Q9HC21 320 aa9.44□□□□□ -0.9
NEDD8-205ENST00000527046 PAPOLBQ9NRJ5 636 aaKnown RBP9.44□□□□□ -0.9
NEDD8-205ENST00000527046 POFUT2Q9Y2G5 429 aa9.44□□□□□ -0.9
NEDD8-205ENST00000527046 IGLV1-36A0A0B4J1U3 117 aa9.43□□□□□ -0.9
NEDD8-205ENST00000527046 A0A1W2PR80 420 aa9.43□□□□□ -0.9
NEDD8-205ENST00000527046 FAM221AA4D161 298 aa9.43□□□□□ -0.9
NEDD8-205ENST00000527046 A6NIZ1 184 aa9.43□□□□□ -0.9
NEDD8-205ENST00000527046 OR6C65A6NJZ3 312 aa9.43□□□□□ -0.9
NEDD8-205ENST00000527046 PRSS44E7EML9 344 aa9.43□□□□□ -0.9
NEDD8-205ENST00000527046 AHCYL1O43865 530 aa9.43□□□□□ -0.9
NEDD8-205ENST00000527046 SEC14L2O76054 403 aa9.43□□□□□ -0.9
NEDD8-205ENST00000527046 IGHG1P01857 330 aa9.43□□□□□ -0.9
NEDD8-205ENST00000527046 PEX2P28328 305 aa9.43□□□□□ -0.9
NEDD8-205ENST00000527046 NOS3P29474 1203 aa9.43□□□□□ -0.9
NEDD8-205ENST00000527046 CDAP32320 146 aa9.43□□□□□ -0.9
NEDD8-205ENST00000527046 GRK5P34947 590 aa9.43□□□□□ -0.9
NEDD8-205ENST00000527046 ALDH3A2P51648 485 aa9.43□□□□□ -0.9
NEDD8-205ENST00000527046 RPS6KA3P51812 740 aa9.43□□□□□ -0.9
NEDD8-205ENST00000527046 RAP1BP61224 184 aa9.43□□□□□ -0.9
NEDD8-205ENST00000527046 ESRRGP62508 458 aa9.43□□□□□ -0.9
NEDD8-205ENST00000527046 RAP1AP62834 184 aa9.43□□□□□ -0.9
NEDD8-205ENST00000527046 SORDQ00796 357 aa9.43□□□□□ -0.9
NEDD8-205ENST00000527046 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.43□□□□□ -0.9
NEDD8-205ENST00000527046 RIPK1Q13546 671 aa9.43□□□□□ -0.9
NEDD8-205ENST00000527046 TAB1Q15750 504 aa9.43□□□□□ -0.9
NEDD8-205ENST00000527046 PGGHGQ32M88 737 aa9.43□□□□□ -0.9
NEDD8-205ENST00000527046 HIKESHIQ53FT3 197 aa9.43□□□□□ -0.9
NEDD8-205ENST00000527046 THEM4Q5T1C6 240 aa9.43□□□□□ -0.9
NEDD8-205ENST00000527046 SLX4IPQ5VYV7 408 aa9.43□□□□□ -0.9
NEDD8-205ENST00000527046 OTPQ5XKR4 325 aa9.43□□□□□ -0.9
NEDD8-205ENST00000527046 FAM205BPQ63HN1 556 aa9.43□□□□□ -0.9
NEDD8-205ENST00000527046 C12orf73Q69YU5 71 aa9.43□□□□□ -0.9
NEDD8-205ENST00000527046 ZBTB49Q6ZSB9 765 aa9.43□□□□□ -0.9
NEDD8-205ENST00000527046 ZBTB46Q86UZ6 589 aa9.43□□□□□ -0.9
NEDD8-205ENST00000527046 SKA3Q8IX90 412 aa9.43□□□□□ -0.9
NEDD8-205ENST00000527046 GPR137CQ8N3F9 429 aa9.43□□□□□ -0.9
NEDD8-205ENST00000527046 SLC37A3Q8NCC5 494 aa9.43□□□□□ -0.9
NEDD8-205ENST00000527046 OR52E2Q8NGJ4 325 aa9.43□□□□□ -0.9
NEDD8-205ENST00000527046 OR6N1Q8NGY5 312 aa9.43□□□□□ -0.9
NEDD8-205ENST00000527046 DNAJC9Q8WXX5 260 aa9.43□□□□□ -0.9
NEDD8-205ENST00000527046 STMN2Q93045 179 aa9.43□□□□□ -0.9
NEDD8-205ENST00000527046 UBE2FQ969M7 185 aa9.43□□□□□ -0.9
NEDD8-205ENST00000527046 RBM4BQ9BQ04 359 aaKnown RBP9.43□□□□□ -0.9
NEDD8-205ENST00000527046 SPOCK3Q9BQ16 436 aa9.43□□□□□ -0.9
NEDD8-205ENST00000527046 HDHD5Q9BXW7 423 aa9.43□□□□□ -0.9
NEDD8-205ENST00000527046 FN3KQ9H479 309 aa9.43□□□□□ -0.9
NEDD8-205ENST00000527046 NOX3Q9HBY0 568 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms