RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 LRRC75AQ8NAA5 344 aa3.31□□□□□ -1.88
CSDE1-211ENST00000525970 PROKR2Q8NFJ6 384 aa3.31□□□□□ -1.88
CSDE1-211ENST00000525970 OR10H4Q8NGA5 316 aa3.31□□□□□ -1.88
CSDE1-211ENST00000525970 LYPD6BQ8NI32 183 aa3.31□□□□□ -1.88
CSDE1-211ENST00000525970 TYMSOSQ8TAI1 123 aa3.31□□□□□ -1.88
CSDE1-211ENST00000525970 MITD1Q8WV92 249 aa3.31□□□□□ -1.88
CSDE1-211ENST00000525970 RAB1CQ92928 201 aa3.31□□□□□ -1.88
CSDE1-211ENST00000525970 NAT6Q93015 286 aa3.31□□□□□ -1.88
CSDE1-211ENST00000525970 TMEM54Q969K7 222 aa3.31□□□□□ -1.88
CSDE1-211ENST00000525970 C19orf60Q96EN9 201 aa3.31□□□□□ -1.88
CSDE1-211ENST00000525970 JSRP1Q96MG2 331 aaPredicted RBP3.31□□□□□ -1.88
CSDE1-211ENST00000525970 SMIM14Q96QK8 99 aa3.31□□□□□ -1.88
CSDE1-211ENST00000525970 TSG101Q99816 390 aa3.31□□□□□ -1.88
CSDE1-211ENST00000525970 KRTAP4-3Q9BYR4 195 aa3.31□□□□□ -1.88
CSDE1-211ENST00000525970 UCK2Q9BZX2 261 aa3.31□□□□□ -1.88
CSDE1-211ENST00000525970 DEFB127Q9H1M4 99 aa3.31□□□□□ -1.88
CSDE1-211ENST00000525970 OR51J1Q9H342 316 aa3.31□□□□□ -1.88
CSDE1-211ENST00000525970 MRPL47Q9HD33 250 aaKnown RBP3.31□□□□□ -1.88
CSDE1-211ENST00000525970 CHRAC1Q9NRG0 131 aa3.31□□□□□ -1.88
CSDE1-211ENST00000525970 MARCH5Q9NX47 278 aa3.31□□□□□ -1.88
CSDE1-211ENST00000525970 TMEM9Q9P0T7 183 aa3.31□□□□□ -1.88
CSDE1-211ENST00000525970 ING4Q9UNL4 249 aa3.31□□□□□ -1.88
CSDE1-211ENST00000525970 TRAF3IP3Q9Y228 551 aa3.31□□□□□ -1.88
CSDE1-211ENST00000525970 IGKV1D-13A0A0B4J2D9 117 aa3.3□□□□□ -1.88
CSDE1-211ENST00000525970 M0QX08 132 aa3.3□□□□□ -1.88
CSDE1-211ENST00000525970 M0R3G1 203 aa3.3□□□□□ -1.88
CSDE1-211ENST00000525970 NDUFS8O00217 210 aa3.3□□□□□ -1.88
CSDE1-211ENST00000525970 AGPAT2O15120 278 aa3.3□□□□□ -1.88
CSDE1-211ENST00000525970 SCAMP2O15127 329 aaKnown RBP3.3□□□□□ -1.88
CSDE1-211ENST00000525970 CLDN11O75508 207 aa3.3□□□□□ -1.88
CSDE1-211ENST00000525970 CCNB2O95067 398 aa3.3□□□□□ -1.88
CSDE1-211ENST00000525970 SCELO95171 688 aa3.3□□□□□ -1.88
CSDE1-211ENST00000525970 CLIC3O95833 236 aa3.3□□□□□ -1.88
CSDE1-211ENST00000525970 HLA-HP01893 362 aa3.3□□□□□ -1.88
CSDE1-211ENST00000525970 THY1P04216 161 aa3.3□□□□□ -1.88
CSDE1-211ENST00000525970 SERPINA5P05154 406 aa3.3□□□□□ -1.88
CSDE1-211ENST00000525970 DCNP07585 359 aaKnown RBP3.3□□□□□ -1.88
CSDE1-211ENST00000525970 IGKV1-13P0DP09 117 aa3.3□□□□□ -1.88
CSDE1-211ENST00000525970 EIF2S2P20042 333 aaKnown RBP3.3□□□□□ -1.88
CSDE1-211ENST00000525970 AZU1P20160 251 aa3.3□□□□□ -1.88
CSDE1-211ENST00000525970 CD82P27701 267 aa3.3□□□□□ -1.88
CSDE1-211ENST00000525970 BTCP35070 178 aa3.3□□□□□ -1.88
CSDE1-211ENST00000525970 SLC1A2P43004 574 aa3.3□□□□□ -1.88
CSDE1-211ENST00000525970 BCAP31P51572 246 aa3.3□□□□□ -1.88
CSDE1-211ENST00000525970 UGT2B15P54855 530 aa3.3□□□□□ -1.88
CSDE1-211ENST00000525970 HADHBP55084 474 aaKnown RBP3.3□□□□□ -1.88
CSDE1-211ENST00000525970 SELENOTP62341 195 aa3.3□□□□□ -1.88
CSDE1-211ENST00000525970 CSNK1G2P78368 415 aa3.3□□□□□ -1.88
CSDE1-211ENST00000525970 ADARB1P78563 741 aaKnown RBP3.3□□□□□ -1.88
CSDE1-211ENST00000525970 ZNF45Q02386 682 aa3.3□□□□□ -1.88
CSDE1-211ENST00000525970 ZNF92Q03936 586 aa3.3□□□□□ -1.88
CSDE1-211ENST00000525970 KIAA0040Q15053 153 aa3.3□□□□□ -1.88
CSDE1-211ENST00000525970 WDR43Q15061 677 aaKnown RBP eCLIP3.3□□□□□ -1.88
CSDE1-211ENST00000525970 NCF4Q15080 339 aa3.3□□□□□ -1.88
CSDE1-211ENST00000525970 HNRNPA1L2Q32P51 320 aaKnown RBP3.3□□□□□ -1.88
CSDE1-211ENST00000525970 SPESP1Q6UW49 350 aa3.3□□□□□ -1.88
CSDE1-211ENST00000525970 BAIAP2L2Q6UXY1 529 aa3.3□□□□□ -1.88
CSDE1-211ENST00000525970 ZNF620Q6ZNG0 422 aa3.3□□□□□ -1.88
CSDE1-211ENST00000525970 MRPL21Q7Z2W9 205 aaKnown RBP3.3□□□□□ -1.88
CSDE1-211ENST00000525970 ZADH2Q8N4Q0 377 aa3.3□□□□□ -1.88
CSDE1-211ENST00000525970 JAGN1Q8N5M9 183 aa3.3□□□□□ -1.88
CSDE1-211ENST00000525970 CSGALNACT2Q8N6G5 542 aa3.3□□□□□ -1.88
CSDE1-211ENST00000525970 PRELID2Q8N945 189 aa3.3□□□□□ -1.88
CSDE1-211ENST00000525970 SLC7A13Q8TCU3 470 aa3.3□□□□□ -1.88
CSDE1-211ENST00000525970 MRAPQ8TCY5 172 aa3.3□□□□□ -1.88
CSDE1-211ENST00000525970 CERS2Q96G23 380 aa3.3□□□□□ -1.88
CSDE1-211ENST00000525970 FOXN4Q96NZ1 517 aa3.3□□□□□ -1.88
CSDE1-211ENST00000525970 ECSITQ9BQ95 431 aa3.3□□□□□ -1.88
CSDE1-211ENST00000525970 EBF4Q9BQW3 602 aa3.3□□□□□ -1.88
CSDE1-211ENST00000525970 CNPY3Q9BT09 278 aa3.3□□□□□ -1.88
CSDE1-211ENST00000525970 NAT9Q9BTE0 207 aa3.3□□□□□ -1.88
CSDE1-211ENST00000525970 ACTR3CQ9C0K3 210 aaPredicted RBP3.3□□□□□ -1.88
CSDE1-211ENST00000525970 NXF3Q9H4D5 531 aaKnown RBP3.3□□□□□ -1.88
CSDE1-211ENST00000525970 SH2D2AQ9NP31 389 aa3.3□□□□□ -1.88
CSDE1-211ENST00000525970 MYOZ2Q9NPC6 264 aa3.3□□□□□ -1.88
CSDE1-211ENST00000525970 PRSS16Q9NQE7 514 aa3.3□□□□□ -1.88
CSDE1-211ENST00000525970 AIG1Q9NVV5 245 aa3.3□□□□□ -1.88
CSDE1-211ENST00000525970 HRASLS2Q9NWW9 162 aa3.3□□□□□ -1.88
CSDE1-211ENST00000525970 VNN3Q9NY84 501 aa3.3□□□□□ -1.88
CSDE1-211ENST00000525970 MYEF2Q9P2K5 600 aaKnown RBP3.3□□□□□ -1.88
CSDE1-211ENST00000525970 LGALS13Q9UHV8 139 aa3.3□□□□□ -1.88
CSDE1-211ENST00000525970 BTNL2Q9UIR0 455 aa3.3□□□□□ -1.88
CSDE1-211ENST00000525970 MSH6P52701 1360 aa3.29□□□□□ -1.88
CSDE1-211ENST00000525970 SERPINE3A8MV23 424 aa3.29□□□□□ -1.88
CSDE1-211ENST00000525970 BCKDKO14874 412 aa3.29□□□□□ -1.88
CSDE1-211ENST00000525970 SIVA1O15304 175 aa3.29□□□□□ -1.88
CSDE1-211ENST00000525970 FGFR1OPO95684 399 aaKnown RBP3.29□□□□□ -1.88
CSDE1-211ENST00000525970 TGM6O95932 706 aa3.29□□□□□ -1.88
CSDE1-211ENST00000525970 PAHP00439 452 aa3.29□□□□□ -1.88
CSDE1-211ENST00000525970 OXTP01178 125 aa3.29□□□□□ -1.88
CSDE1-211ENST00000525970 HSPB1P04792 205 aaKnown RBP3.29□□□□□ -1.88
CSDE1-211ENST00000525970 TPM1P09493 284 aa3.29□□□□□ -1.88
CSDE1-211ENST00000525970 SLC2A5P22732 501 aa3.29□□□□□ -1.88
CSDE1-211ENST00000525970 NBL1P41271 181 aa3.29□□□□□ -1.88
CSDE1-211ENST00000525970 TNFSF9P41273 254 aa3.29□□□□□ -1.88
CSDE1-211ENST00000525970 VDAC2P45880 294 aaPredicted RBP3.29□□□□□ -1.88
CSDE1-211ENST00000525970 SUB1P53999 127 aaKnown RBP eCLIP3.29□□□□□ -1.884e-8■■■□□ 15.4
CSDE1-211ENST00000525970 SLC25A11Q02978 314 aaKnown RBP3.29□□□□□ -1.88
CSDE1-211ENST00000525970 SF3A2Q15428 464 aaKnown RBP3.29□□□□□ -1.88
CSDE1-211ENST00000525970 CYTH1Q15438 398 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms