RNA–Protein interactions for RNA: ENST00000525132.1

CSDE1-209, Transcript of cold shock domain containing E1, humanhuman

TSL 5

Gene CSDE1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-209ENST00000525132 TUBGCP4Q9UGJ1 667 aa2.51□□□□□ -2.01
CSDE1-209ENST00000525132 GGA2Q9UJY4 613 aa2.51□□□□□ -2.01
CSDE1-209ENST00000525132 RPH3ALQ9UNE2 315 aa2.51□□□□□ -2.01
CSDE1-209ENST00000525132 IFT52Q9Y366 437 aa2.51□□□□□ -2.01
CSDE1-209ENST00000525132 WIPI2Q9Y4P8 454 aa2.51□□□□□ -2.01
CSDE1-209ENST00000525132 KIAA1549Q9HCM3 1950 aa2.5□□□□□ -2.01
CSDE1-209ENST00000525132 A0A0J9YVX5 310 aa2.5□□□□□ -2.01
CSDE1-209ENST00000525132 A0A1B0GVL5 298 aa2.5□□□□□ -2.01
CSDE1-209ENST00000525132 IGLON5A6NGN9 336 aa2.5□□□□□ -2.01
CSDE1-209ENST00000525132 SNTNA6NMZ2 147 aa2.5□□□□□ -2.01
CSDE1-209ENST00000525132 EEF1E1-BLOC1S5C9J1V9 151 aa2.5□□□□□ -2.01
CSDE1-209ENST00000525132 M0QX08 132 aa2.5□□□□□ -2.01
CSDE1-209ENST00000525132 EEF1E1O43324 174 aaKnown RBP2.5□□□□□ -2.01
CSDE1-209ENST00000525132 SPOPO43791 374 aa2.5□□□□□ -2.01
CSDE1-209ENST00000525132 TIMM8AO60220 97 aaPredicted RBP2.5□□□□□ -2.01
CSDE1-209ENST00000525132 MTRF1O75570 445 aaKnown RBP2.5□□□□□ -2.01
CSDE1-209ENST00000525132 ANXA9O76027 345 aa2.5□□□□□ -2.01
CSDE1-209ENST00000525132 SCGNO76038 276 aa2.5□□□□□ -2.01
CSDE1-209ENST00000525132 NR3C1P04150 777 aa2.5□□□□□ -2.01
CSDE1-209ENST00000525132 S100A9P06702 114 aaKnown RBP2.5□□□□□ -2.01
CSDE1-209ENST00000525132 UMODP07911 640 aa2.5□□□□□ -2.01
CSDE1-209ENST00000525132 RHOXF2BP0C7M4 288 aa2.5□□□□□ -2.01
CSDE1-209ENST00000525132 TROVE2P10155 538 aaKnown RBP eCLIP2.5□□□□□ -2.01
CSDE1-209ENST00000525132 ERVK-10P10266 1014 aa2.5□□□□□ -2.01
CSDE1-209ENST00000525132 PTBP1P26599 531 aaKnown RBP eCLIP2.5□□□□□ -2.01
CSDE1-209ENST00000525132 RORAP35398 523 aa2.5□□□□□ -2.01
CSDE1-209ENST00000525132 CDKN2AP42771 156 aaKnown RBP2.5□□□□□ -2.01
CSDE1-209ENST00000525132 MAGEA5P43359 124 aa2.5□□□□□ -2.01
CSDE1-209ENST00000525132 KLK7P49862 253 aa2.5□□□□□ -2.01
CSDE1-209ENST00000525132 AP3M2P53677 418 aa2.5□□□□□ -2.01
CSDE1-209ENST00000525132 RPS21P63220 83 aaKnown RBP2.5□□□□□ -2.01
CSDE1-209ENST00000525132 TUBA1BP68363 451 aa2.5□□□□□ -2.01
CSDE1-209ENST00000525132 ADARB1P78563 741 aaKnown RBP2.5□□□□□ -2.01
CSDE1-209ENST00000525132 GAGE5Q13069 117 aa2.5□□□□□ -2.01
CSDE1-209ENST00000525132 GAGE6Q13070 117 aa2.5□□□□□ -2.01
CSDE1-209ENST00000525132 TFDP1Q14186 410 aa2.5□□□□□ -2.01
CSDE1-209ENST00000525132 STK11Q15831 433 aa2.5□□□□□ -2.01
CSDE1-209ENST00000525132 BEND6Q5SZJ8 279 aaPredicted RBP2.5□□□□□ -2.01
CSDE1-209ENST00000525132 PDSS1Q5T2R2 415 aa2.5□□□□□ -2.01
CSDE1-209ENST00000525132 AADACL4Q5VUY2 407 aa2.5□□□□□ -2.01
CSDE1-209ENST00000525132 C9orf57Q5W0N0 161 aa2.5□□□□□ -2.01
CSDE1-209ENST00000525132 LRRC66Q68CR7 880 aa2.5□□□□□ -2.01
CSDE1-209ENST00000525132 FBXL22Q6P050 247 aa2.5□□□□□ -2.01
CSDE1-209ENST00000525132 DOK6Q6PKX4 331 aa2.5□□□□□ -2.01
CSDE1-209ENST00000525132 ZNF562Q6V9R5 426 aa2.5□□□□□ -2.01
CSDE1-209ENST00000525132 ZNF730Q6ZMV8 503 aa2.5□□□□□ -2.01
CSDE1-209ENST00000525132 Q6ZRG5 221 aa2.5□□□□□ -2.01
CSDE1-209ENST00000525132 Q6ZVQ6 151 aa2.5□□□□□ -2.01
CSDE1-209ENST00000525132 BZW1Q7L1Q6 419 aaKnown RBP2.5□□□□□ -2.01
CSDE1-209ENST00000525132 PIGZQ86VD9 579 aa2.5□□□□□ -2.01
CSDE1-209ENST00000525132 RANBP3LQ86VV4 465 aaPredicted RBP2.5□□□□□ -2.01
CSDE1-209ENST00000525132 KIRREL3Q8IZU9 778 aa2.5□□□□□ -2.01
CSDE1-209ENST00000525132 GPR137CQ8N3F9 429 aa2.5□□□□□ -2.01
CSDE1-209ENST00000525132 OR1L3Q8NH93 324 aa2.5□□□□□ -2.01
CSDE1-209ENST00000525132 FAM81AQ8TBF8 368 aa2.5□□□□□ -2.01
CSDE1-209ENST00000525132 SMAP2Q8WU79 429 aaPredicted RBP2.5□□□□□ -2.01
CSDE1-209ENST00000525132 DNAJA4Q8WW22 397 aaPredicted RBP2.5□□□□□ -2.01
CSDE1-209ENST00000525132 NEUROG1Q92886 237 aa2.5□□□□□ -2.01
CSDE1-209ENST00000525132 MYLPFQ96A32 169 aa2.5□□□□□ -2.01
CSDE1-209ENST00000525132 OMA1Q96E52 524 aa2.5□□□□□ -2.01
CSDE1-209ENST00000525132 AMDHD1Q96NU7 426 aa2.5□□□□□ -2.01
CSDE1-209ENST00000525132 RPRD1AQ96P16 312 aaPredicted RBP2.5□□□□□ -2.01
CSDE1-209ENST00000525132 RHOXF2Q9BQY4 288 aa2.5□□□□□ -2.01
CSDE1-209ENST00000525132 LRRC1Q9BTT6 524 aa2.5□□□□□ -2.01
CSDE1-209ENST00000525132 APOOQ9BUR5 198 aa2.5□□□□□ -2.01
CSDE1-209ENST00000525132 STMN4Q9H169 189 aaPredicted RBP2.5□□□□□ -2.01
CSDE1-209ENST00000525132 POLR3FQ9H1D9 316 aaPredicted RBP2.5□□□□□ -2.01
CSDE1-209ENST00000525132 DDX31Q9H8H2 851 aaKnown RBP2.5□□□□□ -2.01
CSDE1-209ENST00000525132 POLE4Q9NR33 117 aa2.5□□□□□ -2.01
CSDE1-209ENST00000525132 SLC2A8Q9NY64 477 aa2.5□□□□□ -2.01
CSDE1-209ENST00000525132 KLRF1Q9NZS2 232 aa2.5□□□□□ -2.01
CSDE1-209ENST00000525132 PIPOXQ9P0Z9 390 aa2.5□□□□□ -2.01
CSDE1-209ENST00000525132 GNG12Q9UBI6 72 aa2.5□□□□□ -2.01
CSDE1-209ENST00000525132 LSM7Q9UK45 103 aaKnown RBP2.5□□□□□ -2.01
CSDE1-209ENST00000525132 TRAF3IP3Q9Y228 551 aa2.5□□□□□ -2.01
CSDE1-209ENST00000525132 PIGLQ9Y2B2 252 aa2.5□□□□□ -2.01
CSDE1-209ENST00000525132 CCDC88CQ9P219 2028 aa2.5□□□□□ -2.01
CSDE1-209ENST00000525132 KIAA2026Q5HYC2 2103 aa2.5□□□□□ -2.01
CSDE1-209ENST00000525132 BTBD17A6NE02 478 aa2.49□□□□□ -2.01
CSDE1-209ENST00000525132 NKX6-3A6NJ46 265 aa2.49□□□□□ -2.01
CSDE1-209ENST00000525132 FAM74A7A6NL05 159 aa2.49□□□□□ -2.01
CSDE1-209ENST00000525132 PRR23D1E9PI22 279 aaPredicted RBP2.49□□□□□ -2.01
CSDE1-209ENST00000525132 BTN3A3O00478 584 aa2.49□□□□□ -2.01
CSDE1-209ENST00000525132 EI24O14681 340 aa2.49□□□□□ -2.01
CSDE1-209ENST00000525132 POLR2DO15514 142 aaKnown RBP2.49□□□□□ -2.01
CSDE1-209ENST00000525132 PCDH7O60245 1069 aa2.49□□□□□ -2.01
CSDE1-209ENST00000525132 TPST2O60704 377 aa2.49□□□□□ -2.01
CSDE1-209ENST00000525132 CDH16O75309 829 aa2.49□□□□□ -2.01
CSDE1-209ENST00000525132 ZFAND5O76080 213 aa2.49□□□□□ -2.01
CSDE1-209ENST00000525132 LY6HO94772 140 aa2.49□□□□□ -2.01
CSDE1-209ENST00000525132 SLITRK3O94933 977 aa2.49□□□□□ -2.01
CSDE1-209ENST00000525132 PAHP00439 452 aa2.49□□□□□ -2.01
CSDE1-209ENST00000525132 CD8AP01732 235 aa2.49□□□□□ -2.01
CSDE1-209ENST00000525132 ACAA1P09110 424 aaPredicted RBP2.49□□□□□ -2.01
CSDE1-209ENST00000525132 PRR23D2P0DMB1 279 aaPredicted RBP2.49□□□□□ -2.01
CSDE1-209ENST00000525132 KCNE1P15382 129 aa2.49□□□□□ -2.01
CSDE1-209ENST00000525132 GIFP27352 417 aa2.49□□□□□ -2.01
CSDE1-209ENST00000525132 LAP3P28838 519 aa2.49□□□□□ -2.01
CSDE1-209ENST00000525132 CEACAM8P31997 349 aaPredicted RBP2.49□□□□□ -2.01
CSDE1-209ENST00000525132 CD70P32970 193 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms