RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 TMEM200AQ86VY9 491 aa4.03□□□□□ -1.76
CHMP4A-202ENST00000524955 SKA3Q8IX90 412 aa4.03□□□□□ -1.76
CHMP4A-202ENST00000524955 ARIH2OSQ8N7S6 290 aa4.03□□□□□ -1.76
CHMP4A-202ENST00000524955 POMGNT2Q8NAT1 580 aa4.03□□□□□ -1.76
CHMP4A-202ENST00000524955 OR51L1Q8NGJ5 315 aa4.03□□□□□ -1.76
CHMP4A-202ENST00000524955 OR6X1Q8NH79 312 aa4.03□□□□□ -1.76
CHMP4A-202ENST00000524955 ZNF519Q8TB69 540 aa4.03□□□□□ -1.76
CHMP4A-202ENST00000524955 SMAP2Q8WU79 429 aaPredicted RBP4.03□□□□□ -1.76
CHMP4A-202ENST00000524955 BCL2L2Q92843 193 aaPredicted RBP4.03□□□□□ -1.76
CHMP4A-202ENST00000524955 STMN2Q93045 179 aa4.03□□□□□ -1.76
CHMP4A-202ENST00000524955 MCHR2Q969V1 340 aa4.03□□□□□ -1.76
CHMP4A-202ENST00000524955 LRRC46Q96FV0 321 aa4.03□□□□□ -1.76
CHMP4A-202ENST00000524955 DUS3LQ96G46 650 aaKnown RBP4.03□□□□□ -1.76
CHMP4A-202ENST00000524955 PLPPR2Q96GM1 343 aa4.03□□□□□ -1.76
CHMP4A-202ENST00000524955 SLC25A44Q96H78 314 aaPredicted RBP4.03□□□□□ -1.76
CHMP4A-202ENST00000524955 MS4A3Q96HJ5 214 aa4.03□□□□□ -1.76
CHMP4A-202ENST00000524955 KCNK17Q96T54 332 aa4.03□□□□□ -1.76
CHMP4A-202ENST00000524955 SLC29A1Q99808 456 aa4.03□□□□□ -1.76
CHMP4A-202ENST00000524955 HCAR1Q9BXC0 346 aa4.03□□□□□ -1.76
CHMP4A-202ENST00000524955 MRPL13Q9BYD1 178 aaKnown RBP4.03□□□□□ -1.76
CHMP4A-202ENST00000524955 LINC00470Q9BZP3 86 aa4.03□□□□□ -1.76
CHMP4A-202ENST00000524955 NUAK2Q9H093 628 aa4.03□□□□□ -1.76
CHMP4A-202ENST00000524955 SYT4Q9H2B2 425 aa4.03□□□□□ -1.76
CHMP4A-202ENST00000524955 TXNIPQ9H3M7 391 aa4.03□□□□□ -1.76
CHMP4A-202ENST00000524955 NELFAQ9H3P2 528 aa4.03□□□□□ -1.76
CHMP4A-202ENST00000524955 RIBC2Q9H4K1 309 aa4.03□□□□□ -1.76
CHMP4A-202ENST00000524955 YY1AP1Q9H869 796 aa4.03□□□□□ -1.76
CHMP4A-202ENST00000524955 S100A14Q9HCY8 104 aa4.03□□□□□ -1.76
CHMP4A-202ENST00000524955 EMC7Q9NPA0 242 aa4.03□□□□□ -1.76
CHMP4A-202ENST00000524955 NRIP3Q9NQ35 241 aa4.03□□□□□ -1.76
CHMP4A-202ENST00000524955 RPRD1BQ9NQG5 326 aaKnown RBP4.03□□□□□ -1.76
CHMP4A-202ENST00000524955 PAPOLBQ9NRJ5 636 aaKnown RBP4.03□□□□□ -1.76
CHMP4A-202ENST00000524955 ELOVL5Q9NYP7 299 aa4.03□□□□□ -1.76
CHMP4A-202ENST00000524955 TAS2R16Q9NYV7 291 aa4.03□□□□□ -1.76
CHMP4A-202ENST00000524955 NKX1-2Q9UD57 310 aaPredicted RBP4.03□□□□□ -1.76
CHMP4A-202ENST00000524955 AASSQ9UDR5 926 aa4.03□□□□□ -1.76
CHMP4A-202ENST00000524955 NDRG3Q9UGV2 375 aa4.03□□□□□ -1.76
CHMP4A-202ENST00000524955 TMEFF2Q9UIK5 374 aaPredicted RBP4.03□□□□□ -1.76
CHMP4A-202ENST00000524955 MGAT4BQ9UQ53 548 aa4.03□□□□□ -1.76
CHMP4A-202ENST00000524955 RCE1Q9Y256 329 aa4.03□□□□□ -1.76
CHMP4A-202ENST00000524955 POFUT2Q9Y2G5 429 aa4.03□□□□□ -1.76
CHMP4A-202ENST00000524955 COA3Q9Y2R0 106 aaPredicted RBP4.03□□□□□ -1.76
CHMP4A-202ENST00000524955 GPR52Q9Y2T5 361 aa4.03□□□□□ -1.76
CHMP4A-202ENST00000524955 UGT2A1Q9Y4X1 527 aa4.03□□□□□ -1.76
CHMP4A-202ENST00000524955 CDH10Q9Y6N8 788 aa4.03□□□□□ -1.76
CHMP4A-202ENST00000524955 SVILO95425 2214 aa4.03□□□□□ -1.76
CHMP4A-202ENST00000524955 GCN1Q92616 2671 aaKnown RBP4.03□□□□□ -1.76
CHMP4A-202ENST00000524955 ESPL1Q14674 2120 aa4.03□□□□□ -1.76
CHMP4A-202ENST00000524955 UTP20O75691 2785 aaKnown RBP4.02□□□□□ -1.77
CHMP4A-202ENST00000524955 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.02□□□□□ -1.77
CHMP4A-202ENST00000524955 PRSS37A4D1T9 235 aa4.02□□□□□ -1.77
CHMP4A-202ENST00000524955 OR6C68A6NDL8 312 aa4.02□□□□□ -1.77
CHMP4A-202ENST00000524955 DPRXA6NFQ7 191 aa4.02□□□□□ -1.77
CHMP4A-202ENST00000524955 TVP23AA6NH52 213 aa4.02□□□□□ -1.77
CHMP4A-202ENST00000524955 A6NIZ1 184 aa4.02□□□□□ -1.77
CHMP4A-202ENST00000524955 A6NNC1 897 aa4.02□□□□□ -1.77
CHMP4A-202ENST00000524955 DEFB108AA8MXU0 73 aa4.02□□□□□ -1.77
CHMP4A-202ENST00000524955 BHLHE40O14503 412 aa4.02□□□□□ -1.77
CHMP4A-202ENST00000524955 EI24O14681 340 aa4.02□□□□□ -1.77
CHMP4A-202ENST00000524955 IGF2P01344 180 aa4.02□□□□□ -1.77
CHMP4A-202ENST00000524955 IGHMP01871 453 aa4.02□□□□□ -1.77
CHMP4A-202ENST00000524955 EPXP11678 715 aa4.02□□□□□ -1.77
CHMP4A-202ENST00000524955 PSKH1P11801 424 aa4.02□□□□□ -1.77
CHMP4A-202ENST00000524955 OSMP13725 252 aa4.02□□□□□ -1.77
CHMP4A-202ENST00000524955 ANPEPP15144 967 aa4.02□□□□□ -1.77
CHMP4A-202ENST00000524955 CTLA4P16410 223 aa4.02□□□□□ -1.77
CHMP4A-202ENST00000524955 LAP3P28838 519 aa4.02□□□□□ -1.77
CHMP4A-202ENST00000524955 SDHAP31040 664 aa4.02□□□□□ -1.77
CHMP4A-202ENST00000524955 GIPRP48546 466 aa4.02□□□□□ -1.77
CHMP4A-202ENST00000524955 PTDSS1P48651 473 aaKnown RBP4.02□□□□□ -1.77
CHMP4A-202ENST00000524955 IDH3GP51553 393 aaPredicted RBP4.02□□□□□ -1.77
CHMP4A-202ENST00000524955 RPS6KA3P51812 740 aa4.02□□□□□ -1.77
CHMP4A-202ENST00000524955 ARHGDIAP52565 204 aa4.02□□□□□ -1.77
CHMP4A-202ENST00000524955 PRPS1P60891 318 aa4.02□□□□□ -1.77
CHMP4A-202ENST00000524955 UBE2NP61088 152 aaKnown RBP4.02□□□□□ -1.77
CHMP4A-202ENST00000524955 RAP1BP61224 184 aa4.02□□□□□ -1.77
CHMP4A-202ENST00000524955 RAP1AP62834 184 aa4.02□□□□□ -1.77
CHMP4A-202ENST00000524955 SORDQ00796 357 aa4.02□□□□□ -1.77
CHMP4A-202ENST00000524955 BSPH1Q075Z2 132 aa4.02□□□□□ -1.77
CHMP4A-202ENST00000524955 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.02□□□□□ -1.77
CHMP4A-202ENST00000524955 CRMP1Q14194 572 aa4.02□□□□□ -1.77
CHMP4A-202ENST00000524955 GINS1Q14691 196 aa4.02□□□□□ -1.77
CHMP4A-202ENST00000524955 RAB39AQ14964 217 aa4.02□□□□□ -1.77
CHMP4A-202ENST00000524955 P2RY6Q15077 328 aa4.02□□□□□ -1.77
CHMP4A-202ENST00000524955 PGGHGQ32M88 737 aa4.02□□□□□ -1.77
CHMP4A-202ENST00000524955 ZNF362Q5T0B9 420 aaPredicted RBP4.02□□□□□ -1.77
CHMP4A-202ENST00000524955 ADAM5Q6NVV9 412 aa4.02□□□□□ -1.77
CHMP4A-202ENST00000524955 ANKRD16Q6P6B7 361 aa4.02□□□□□ -1.77
CHMP4A-202ENST00000524955 TMEM154Q6P9G4 183 aa4.02□□□□□ -1.77
CHMP4A-202ENST00000524955 SLC25A47Q6Q0C1 308 aa4.02□□□□□ -1.77
CHMP4A-202ENST00000524955 CORO6Q6QEF8 472 aa4.02□□□□□ -1.77
CHMP4A-202ENST00000524955 VHLLQ6RSH7 139 aa4.02□□□□□ -1.77
CHMP4A-202ENST00000524955 SEZ6L2Q6UXD5 910 aa4.02□□□□□ -1.77
CHMP4A-202ENST00000524955 MDP1Q86V88 176 aa4.02□□□□□ -1.77
CHMP4A-202ENST00000524955 JAZF1Q86VZ6 243 aa4.02□□□□□ -1.77
CHMP4A-202ENST00000524955 ZGRF1Q86YA3 2104 aa4.02□□□□□ -1.77
CHMP4A-202ENST00000524955 ZDHHC13Q8IUH4 622 aa4.02□□□□□ -1.77
CHMP4A-202ENST00000524955 OR6V1Q8N148 313 aa4.02□□□□□ -1.77
CHMP4A-202ENST00000524955 PQLC1Q8N2U9 271 aa4.02□□□□□ -1.77
CHMP4A-202ENST00000524955 PIAS4Q8N2W9 510 aaPredicted RBP4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms