RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 TAS2R5Q9NYW4 299 aa13.21□□□□□ -0.29
MRPS28-209ENST00000522987 CHP2O43745 196 aa13.2□□□□□ -0.3
MRPS28-209ENST00000522987 LYPD3O95274 346 aa13.2□□□□□ -0.3
MRPS28-209ENST00000522987 SERPINA5P05154 406 aa13.2□□□□□ -0.3
MRPS28-209ENST00000522987 MSMBP08118 114 aa13.2□□□□□ -0.3
MRPS28-209ENST00000522987 QDPRP09417 244 aa13.2□□□□□ -0.3
MRPS28-209ENST00000522987 GAAP10253 952 aa13.2□□□□□ -0.3
MRPS28-209ENST00000522987 MRPL19P49406 292 aaKnown RBP13.2□□□□□ -0.3
MRPS28-209ENST00000522987 EVX1P49640 407 aa13.2□□□□□ -0.3
MRPS28-209ENST00000522987 RBBP4Q09028 425 aa13.2□□□□□ -0.3
MRPS28-209ENST00000522987 ZNF74Q16587 644 aa13.2□□□□□ -0.3
MRPS28-209ENST00000522987 RUNDC3AQ59EK9 446 aa13.2□□□□□ -0.3
MRPS28-209ENST00000522987 FAHD2BQ6P2I3 314 aaPredicted RBP13.2□□□□□ -0.3
MRPS28-209ENST00000522987 TTC33Q6PID6 262 aaPredicted RBP13.2□□□□□ -0.3
MRPS28-209ENST00000522987 DHDDSQ86SQ9 333 aa13.2□□□□□ -0.3
MRPS28-209ENST00000522987 LRRC18Q8N456 261 aa13.2□□□□□ -0.3
MRPS28-209ENST00000522987 SYT14Q8NB59 555 aa13.2□□□□□ -0.3
MRPS28-209ENST00000522987 C11orf65Q8NCR3 313 aa13.2□□□□□ -0.3
MRPS28-209ENST00000522987 SLC30A7Q8NEW0 376 aa13.2□□□□□ -0.3
MRPS28-209ENST00000522987 ZNF566Q969W8 418 aa13.2□□□□□ -0.3
MRPS28-209ENST00000522987 FAHD2AQ96GK7 314 aa13.2□□□□□ -0.3
MRPS28-209ENST00000522987 ZNF347Q96SE7 839 aa13.2□□□□□ -0.3
MRPS28-209ENST00000522987 CCDC28BQ9BUN5 200 aa13.2□□□□□ -0.3
MRPS28-209ENST00000522987 NANSQ9NR45 359 aa13.2□□□□□ -0.3
MRPS28-209ENST00000522987 SLC7A8Q9UHI5 535 aa13.2□□□□□ -0.3
MRPS28-209ENST00000522987 CORO2BQ9UQ03 480 aa13.2□□□□□ -0.3
MRPS28-209ENST00000522987 TANC2Q9HCD6 1990 aa13.2□□□□□ -0.3
MRPS28-209ENST00000522987 BLOC1S5-TXNDC5H3BN57 136 aa13.19□□□□□ -0.3
MRPS28-209ENST00000522987 DHHO43323 396 aa13.19□□□□□ -0.3
MRPS28-209ENST00000522987 TPD52L2O43399 206 aaKnown RBP13.19□□□□□ -0.3
MRPS28-209ENST00000522987 SHOX2O60902 331 aaPredicted RBP13.19□□□□□ -0.3
MRPS28-209ENST00000522987 RP2O75695 350 aa13.19□□□□□ -0.3
MRPS28-209ENST00000522987 MT-ATP6P00846 226 aa13.19□□□□□ -0.3
MRPS28-209ENST00000522987 F13BP05160 661 aa13.19□□□□□ -0.3
MRPS28-209ENST00000522987 OR8G3PP0DMU2 310 aa13.19□□□□□ -0.3
MRPS28-209ENST00000522987 TNFRSF1BP20333 461 aa13.19□□□□□ -0.3
MRPS28-209ENST00000522987 RBMXP38159 391 aaKnown RBP13.19□□□□□ -0.3
MRPS28-209ENST00000522987 PCBP3P57721 371 aaKnown RBP13.19□□□□□ -0.3
MRPS28-209ENST00000522987 CLRN1P58418 232 aa13.19□□□□□ -0.3
MRPS28-209ENST00000522987 LMO4P61968 165 aa13.19□□□□□ -0.3
MRPS28-209ENST00000522987 RUNX1T1Q06455 604 aa13.19□□□□□ -0.3
MRPS28-209ENST00000522987 ZNF613Q6PF04 617 aa13.19□□□□□ -0.3
MRPS28-209ENST00000522987 LINC00114Q6XXX2 140 aa13.19□□□□□ -0.3
MRPS28-209ENST00000522987 PIWIL3Q7Z3Z3 882 aaKnown RBP13.19□□□□□ -0.3
MRPS28-209ENST00000522987 RETREG3Q86VR2 466 aa13.19□□□□□ -0.3
MRPS28-209ENST00000522987 MEX3DQ86XN8 651 aaKnown RBP13.19□□□□□ -0.3
MRPS28-209ENST00000522987 OR6X1Q8NH79 312 aa13.19□□□□□ -0.3
MRPS28-209ENST00000522987 ADAMTS16Q8TE57 1224 aa13.19□□□□□ -0.3
MRPS28-209ENST00000522987 GRIP1Q9Y3R0 1128 aa13.19□□□□□ -0.3
MRPS28-209ENST00000522987 CACNG2Q9Y698 323 aa13.19□□□□□ -0.3
MRPS28-209ENST00000522987 TENM1Q9UKZ4 2725 aa13.19□□□□□ -0.3
MRPS28-209ENST00000522987 LOC105371242A0A075B767 164 aa13.18□□□□□ -0.3
MRPS28-209ENST00000522987 TGDSO95455 350 aa13.18□□□□□ -0.3
MRPS28-209ENST00000522987 HIST1H2ABP04908 130 aa13.18□□□□□ -0.3
MRPS28-209ENST00000522987 PGA4P0DJD7 388 aa13.18□□□□□ -0.3
MRPS28-209ENST00000522987 PGA3P0DJD8 388 aa13.18□□□□□ -0.3
MRPS28-209ENST00000522987 CD247P20963 164 aa13.18□□□□□ -0.3
MRPS28-209ENST00000522987 PCMT1P22061 227 aa13.18□□□□□ -0.3
MRPS28-209ENST00000522987 CCNOP22674 350 aa13.18□□□□□ -0.3
MRPS28-209ENST00000522987 KLF3P57682 345 aaPredicted RBP13.18□□□□□ -0.3
MRPS28-209ENST00000522987 ACTG1P63261 375 aa13.18□□□□□ -0.3
MRPS28-209ENST00000522987 TSTQ16762 297 aaKnown RBP13.18□□□□□ -0.3
MRPS28-209ENST00000522987 BEND6Q5SZJ8 279 aaPredicted RBP13.18□□□□□ -0.3
MRPS28-209ENST00000522987 SPATA46Q5T0L3 261 aa13.18□□□□□ -0.3
MRPS28-209ENST00000522987 SWT1Q5T5J6 900 aaKnown RBP13.18□□□□□ -0.3
MRPS28-209ENST00000522987 TMEM53Q6P2H8 277 aa13.18□□□□□ -0.3
MRPS28-209ENST00000522987 TMEM154Q6P9G4 183 aa13.18□□□□□ -0.3
MRPS28-209ENST00000522987 HIST3H2AQ7L7L0 130 aa13.18□□□□□ -0.3
MRPS28-209ENST00000522987 SLC16A14Q7RTX9 510 aa13.18□□□□□ -0.3
MRPS28-209ENST00000522987 NANOGNBQ7Z5D8 188 aa13.18□□□□□ -0.3
MRPS28-209ENST00000522987 BHLHE22Q8NFJ8 381 aaPredicted RBP13.18□□□□□ -0.3
MRPS28-209ENST00000522987 SEMA6DQ8NFY4 1073 aa13.18□□□□□ -0.3
MRPS28-209ENST00000522987 PFN4Q8NHR9 129 aa13.18□□□□□ -0.3
MRPS28-209ENST00000522987 SYNPRQ8TBG9 265 aa13.18□□□□□ -0.3
MRPS28-209ENST00000522987 SLC26A7Q8TE54 656 aa13.18□□□□□ -0.3
MRPS28-209ENST00000522987 DYDC1Q8WWB3 177 aa13.18□□□□□ -0.3
MRPS28-209ENST00000522987 HIST1H2ACQ93077 130 aa13.18□□□□□ -0.3
MRPS28-209ENST00000522987 TAMM41Q96BW9 452 aa13.18□□□□□ -0.3
MRPS28-209ENST00000522987 SLC25A44Q96H78 314 aaPredicted RBP13.18□□□□□ -0.3
MRPS28-209ENST00000522987 RACGAP1Q9H0H5 632 aa13.18□□□□□ -0.3
MRPS28-209ENST00000522987 HINT3Q9NQE9 182 aaKnown RBP13.18□□□□□ -0.3
MRPS28-209ENST00000522987 LEF1Q9UJU2 399 aaPredicted RBP13.18□□□□□ -0.3
MRPS28-209ENST00000522987 ZNF346Q9UL40 294 aaKnown RBP13.18□□□□□ -0.3
MRPS28-209ENST00000522987 TRAPPC13A5PLN9 417 aa13.17□□□□□ -0.3
MRPS28-209ENST00000522987 C17orf100A8MU93 164 aa13.17□□□□□ -0.3
MRPS28-209ENST00000522987 MCIDASD6RGH6 385 aa13.17□□□□□ -0.3
MRPS28-209ENST00000522987 FARS2O95363 451 aaKnown RBP13.17□□□□□ -0.3
MRPS28-209ENST00000522987 BCL10O95999 233 aa13.17□□□□□ -0.3
MRPS28-209ENST00000522987 AVPP01185 164 aa13.17□□□□□ -0.3
MRPS28-209ENST00000522987 TFP02787 698 aa13.17□□□□□ -0.3
MRPS28-209ENST00000522987 CFPP27918 469 aa13.17□□□□□ -0.3
MRPS28-209ENST00000522987 CDAP32320 146 aa13.17□□□□□ -0.3
MRPS28-209ENST00000522987 NFYCQ13952 458 aa13.17□□□□□ -0.3
MRPS28-209ENST00000522987 REP15Q6BDI9 236 aa13.17□□□□□ -0.3
MRPS28-209ENST00000522987 UGT2A3Q6UWM9 527 aa13.17□□□□□ -0.3
MRPS28-209ENST00000522987 C1orf229Q6ZS94 237 aaPredicted RBP13.17□□□□□ -0.3
MRPS28-209ENST00000522987 RBM15BQ8NDT2 890 aaKnown RBP13.17□□□□□ -0.3
MRPS28-209ENST00000522987 OR51F2Q8NH61 342 aa13.17□□□□□ -0.3
MRPS28-209ENST00000522987 SNX33Q8WV41 574 aa13.17□□□□□ -0.3
MRPS28-209ENST00000522987 MCHR2Q969V1 340 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms