RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, humanhuman

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-215ENST00000522963 PARPBPQ9NWS1 579 aa10.54□□□□□ -0.72
PVT1-215ENST00000522963 TVP23BQ9NYZ1 205 aa10.54□□□□□ -0.72
PVT1-215ENST00000522963 A6NIZ1 184 aa10.53□□□□□ -0.72
PVT1-215ENST00000522963 XKRYO14609 159 aa10.53□□□□□ -0.72
PVT1-215ENST00000522963 SLC43A1O75387 559 aa10.53□□□□□ -0.72
PVT1-215ENST00000522963 CLIC3O95833 236 aa10.53□□□□□ -0.72
PVT1-215ENST00000522963 IL18BPO95998 194 aa10.53□□□□□ -0.72
PVT1-215ENST00000522963 CGAP01215 116 aa10.53□□□□□ -0.72
PVT1-215ENST00000522963 IGHG1P01857 330 aa10.53□□□□□ -0.72
PVT1-215ENST00000522963 CAPGP40121 348 aa10.53□□□□□ -0.72
PVT1-215ENST00000522963 OR3A2P47893 321 aa10.53□□□□□ -0.72
PVT1-215ENST00000522963 RAP1BP61224 184 aa10.53□□□□□ -0.72
PVT1-215ENST00000522963 RAP1AP62834 184 aa10.53□□□□□ -0.72
PVT1-215ENST00000522963 TFF3Q07654 80 aa10.53□□□□□ -0.72
PVT1-215ENST00000522963 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.53□□□□□ -0.72
PVT1-215ENST00000522963 LGALS3BPQ08380 585 aa10.53□□□□□ -0.72
PVT1-215ENST00000522963 KEAP1Q14145 624 aa10.53□□□□□ -0.72
PVT1-215ENST00000522963 SNAPC1Q16533 368 aa10.53□□□□□ -0.72
PVT1-215ENST00000522963 PHYHD1Q5SRE7 291 aa10.53□□□□□ -0.72
PVT1-215ENST00000522963 C6orf52Q5T4I8 152 aa10.53□□□□□ -0.72
PVT1-215ENST00000522963 TSPO2Q5TGU0 170 aa10.53□□□□□ -0.72
PVT1-215ENST00000522963 TTC23Q5W5X9 447 aa10.53□□□□□ -0.72
PVT1-215ENST00000522963 LEG1Q6P5S2 330 aa10.53□□□□□ -0.72
PVT1-215ENST00000522963 HDDC2Q7Z4H3 204 aa10.53□□□□□ -0.72
PVT1-215ENST00000522963 JAZF1Q86VZ6 243 aa10.53□□□□□ -0.72
PVT1-215ENST00000522963 C20orf196Q8IYI0 205 aa10.53□□□□□ -0.72
PVT1-215ENST00000522963 SYT14Q8NB59 555 aa10.53□□□□□ -0.72
PVT1-215ENST00000522963 CYB561A3Q8NBI2 242 aa10.53□□□□□ -0.72
PVT1-215ENST00000522963 SLC37A3Q8NCC5 494 aa10.53□□□□□ -0.72
PVT1-215ENST00000522963 NPEPL1Q8NDH3 523 aa10.53□□□□□ -0.72
PVT1-215ENST00000522963 ZNF555Q8NEP9 628 aa10.53□□□□□ -0.72
PVT1-215ENST00000522963 SDR9C7Q8NEX9 313 aa10.53□□□□□ -0.72
PVT1-215ENST00000522963 NOXO1Q8NFA2 376 aa10.53□□□□□ -0.72
PVT1-215ENST00000522963 TFAP2CQ92754 450 aa10.53□□□□□ -0.72
PVT1-215ENST00000522963 TMEM54Q969K7 222 aa10.53□□□□□ -0.72
PVT1-215ENST00000522963 ZNF566Q969W8 418 aa10.53□□□□□ -0.72
PVT1-215ENST00000522963 APH1AQ96BI3 265 aa10.53□□□□□ -0.72
PVT1-215ENST00000522963 KCNK17Q96T54 332 aa10.53□□□□□ -0.72
PVT1-215ENST00000522963 NMNAT3Q96T66 252 aa10.53□□□□□ -0.72
PVT1-215ENST00000522963 DDOQ99489 341 aa10.53□□□□□ -0.72
PVT1-215ENST00000522963 RBM24Q9BX46 236 aaKnown RBP10.53□□□□□ -0.72
PVT1-215ENST00000522963 TEX12Q9BXU0 123 aa10.53□□□□□ -0.72
PVT1-215ENST00000522963 OPN3Q9H1Y3 402 aaPredicted RBP10.53□□□□□ -0.72
PVT1-215ENST00000522963 KLHL21Q9UJP4 597 aa10.53□□□□□ -0.72
PVT1-215ENST00000522963 FOXD3Q9UJU5 478 aaPredicted RBP10.53□□□□□ -0.72
PVT1-215ENST00000522963 PROCRQ9UNN8 238 aa10.53□□□□□ -0.72
PVT1-215ENST00000522963 GMPPBQ9Y5P6 360 aa10.53□□□□□ -0.72
PVT1-215ENST00000522963 MAST4O15021 2626 aa10.52□□□□□ -0.73
PVT1-215ENST00000522963 SLC22A23A1A5C7 686 aa10.52□□□□□ -0.73
PVT1-215ENST00000522963 PRSS37A4D1T9 235 aa10.52□□□□□ -0.73
PVT1-215ENST00000522963 RIIAD1A6NNX1 92 aa10.52□□□□□ -0.73
PVT1-215ENST00000522963 CENPBD1B2RD01 187 aa10.52□□□□□ -0.73
PVT1-215ENST00000522963 H0YAE9 185 aa10.52□□□□□ -0.73
PVT1-215ENST00000522963 PRKYO43930 277 aa10.52□□□□□ -0.73
PVT1-215ENST00000522963 UPK3AO75631 287 aa10.52□□□□□ -0.73
PVT1-215ENST00000522963 IFNGP01579 166 aa10.52□□□□□ -0.73
PVT1-215ENST00000522963 IGHV3-9P01782 118 aa10.52□□□□□ -0.73
PVT1-215ENST00000522963 CSNK1A1P48729 337 aa10.52□□□□□ -0.73
PVT1-215ENST00000522963 PCYT1AP49585 367 aa10.52□□□□□ -0.73
PVT1-215ENST00000522963 CLRN1P58418 232 aa10.52□□□□□ -0.73
PVT1-215ENST00000522963 EFNB1P98172 346 aa10.52□□□□□ -0.73
PVT1-215ENST00000522963 DBPQ10586 325 aaPredicted RBP10.52□□□□□ -0.73
PVT1-215ENST00000522963 ITGADQ13349 1161 aa10.52□□□□□ -0.73
PVT1-215ENST00000522963 CRMP1Q14194 572 aa10.52□□□□□ -0.73
PVT1-215ENST00000522963 HIST3H3Q16695 136 aa10.52□□□□□ -0.73
PVT1-215ENST00000522963 TFAP2EQ6VUC0 442 aa10.52□□□□□ -0.73
PVT1-215ENST00000522963 LINGO2Q7L985 606 aa10.52□□□□□ -0.73
PVT1-215ENST00000522963 ADCK1Q86TW2 530 aa10.52□□□□□ -0.73
PVT1-215ENST00000522963 ZNF100Q8IYN0 542 aa10.52□□□□□ -0.73
PVT1-215ENST00000522963 OR6N1Q8NGY5 312 aa10.52□□□□□ -0.73
PVT1-215ENST00000522963 FAM81AQ8TBF8 368 aa10.52□□□□□ -0.73
PVT1-215ENST00000522963 RNASE6Q93091 150 aaKnown RBP10.52□□□□□ -0.73
PVT1-215ENST00000522963 UBE2FQ969M7 185 aa10.52□□□□□ -0.73
PVT1-215ENST00000522963 NMD3Q96D46 503 aaKnown RBP10.52□□□□□ -0.73
PVT1-215ENST00000522963 LRR1Q96L50 414 aa10.52□□□□□ -0.73
PVT1-215ENST00000522963 SLC38A2Q96QD8 506 aa10.52□□□□□ -0.73
PVT1-215ENST00000522963 SNX18Q96RF0 628 aa10.52□□□□□ -0.73
PVT1-215ENST00000522963 ZNF184Q99676 751 aaPredicted RBP10.52□□□□□ -0.73
PVT1-215ENST00000522963 ALG12Q9BV10 488 aa10.52□□□□□ -0.73
PVT1-215ENST00000522963 PRRG3Q9BZD7 231 aa10.52□□□□□ -0.73
PVT1-215ENST00000522963 SLCO5A1Q9H2Y9 848 aa10.52□□□□□ -0.73
PVT1-215ENST00000522963 PIGMQ9H3S5 423 aa10.52□□□□□ -0.73
PVT1-215ENST00000522963 PLSCR4Q9NRQ2 329 aa10.52□□□□□ -0.73
PVT1-215ENST00000522963 SLC7A10Q9NS82 523 aa10.52□□□□□ -0.73
PVT1-215ENST00000522963 GLTPQ9NZD2 209 aa10.52□□□□□ -0.73
PVT1-215ENST00000522963 VSX1Q9NZR4 365 aaPredicted RBP10.52□□□□□ -0.73
PVT1-215ENST00000522963 PRSS50Q9UI38 385 aa10.52□□□□□ -0.73
PVT1-215ENST00000522963 GPR52Q9Y2T5 361 aa10.52□□□□□ -0.73
PVT1-215ENST00000522963 FREM1Q5H8C1 2179 aa10.52□□□□□ -0.73
PVT1-215ENST00000522963 IGKV1D-43A0A0B4J1Z2 117 aa10.51□□□□□ -0.73
PVT1-215ENST00000522963 OR6C68A6NDL8 312 aa10.51□□□□□ -0.73
PVT1-215ENST00000522963 M0R3G1 203 aa10.51□□□□□ -0.73
PVT1-215ENST00000522963 TLX2O43763 284 aaPredicted RBP10.51□□□□□ -0.73
PVT1-215ENST00000522963 RENP00797 406 aa10.51□□□□□ -0.73
PVT1-215ENST00000522963 GNAO1P09471 354 aa10.51□□□□□ -0.73
PVT1-215ENST00000522963 ZNF3P17036 446 aa10.51□□□□□ -0.73
PVT1-215ENST00000522963 HSPA13P48723 471 aa10.51□□□□□ -0.73
PVT1-215ENST00000522963 CDC42P60953 191 aa10.51□□□□□ -0.73
PVT1-215ENST00000522963 FMODQ06828 376 aa10.51□□□□□ -0.73
PVT1-215ENST00000522963 CD47Q08722 323 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms