RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 MRPL40Q9NQ50 206 aaKnown RBP3.36□□□□□ -1.87
SKP1-209ENST00000522552 PAK1IP1Q9NWT1 392 aaPredicted RBP3.36□□□□□ -1.87
SKP1-209ENST00000522552 TAS2R9Q9NYW1 312 aa3.36□□□□□ -1.87
SKP1-209ENST00000522552 EHFQ9NZC4 300 aa3.36□□□□□ -1.87
SKP1-209ENST00000522552 RSPH14Q9UHP6 348 aa3.36□□□□□ -1.87
SKP1-209ENST00000522552 LGALS13Q9UHV8 139 aa3.36□□□□□ -1.87
SKP1-209ENST00000522552 RPL36Q9Y3U8 105 aaKnown RBP3.36□□□□□ -1.87
SKP1-209ENST00000522552 HS3ST3B1Q9Y662 390 aa3.36□□□□□ -1.87
SKP1-209ENST00000522552 MROH7Q68CQ1 1323 aa3.35□□□□□ -1.87
SKP1-209ENST00000522552 TRAV8-7A0A075B6U6 113 aa3.35□□□□□ -1.87
SKP1-209ENST00000522552 WDR91A4D1P6 747 aa3.35□□□□□ -1.87
SKP1-209ENST00000522552 GOLGA6L19H0YKK7 550 aa3.35□□□□□ -1.87
SKP1-209ENST00000522552 CDC7O00311 574 aa3.35□□□□□ -1.87
SKP1-209ENST00000522552 LSM8O95777 96 aaKnown RBP3.35□□□□□ -1.87
SKP1-209ENST00000522552 PAK4O96013 591 aaPredicted RBP3.35□□□□□ -1.87
SKP1-209ENST00000522552 NGFP01138 241 aa3.35□□□□□ -1.87
SKP1-209ENST00000522552 FGF1P05230 155 aa3.35□□□□□ -1.87
SKP1-209ENST00000522552 OR9G9P0C7N8 305 aa3.35□□□□□ -1.87
SKP1-209ENST00000522552 MYOGP15173 224 aa3.35□□□□□ -1.87
SKP1-209ENST00000522552 SELEP16581 610 aa3.35□□□□□ -1.87
SKP1-209ENST00000522552 CAPN2P17655 700 aa3.35□□□□□ -1.87
SKP1-209ENST00000522552 HSD11B1P28845 292 aa3.35□□□□□ -1.87
SKP1-209ENST00000522552 ARR3P36575 388 aa3.35□□□□□ -1.87
SKP1-209ENST00000522552 PTGDSP41222 190 aa3.35□□□□□ -1.87
SKP1-209ENST00000522552 ELK3P41970 407 aa3.35□□□□□ -1.87
SKP1-209ENST00000522552 MAGEA3P43357 314 aa3.35□□□□□ -1.87
SKP1-209ENST00000522552 CBX5P45973 191 aa3.35□□□□□ -1.87
SKP1-209ENST00000522552 SSR4P51571 173 aa3.35□□□□□ -1.87
SKP1-209ENST00000522552 PROK1P58294 105 aa3.35□□□□□ -1.87
SKP1-209ENST00000522552 OR2B8PP59922 312 aa3.35□□□□□ -1.87
SKP1-209ENST00000522552 HILS1P60008 231 aa3.35□□□□□ -1.87
SKP1-209ENST00000522552 MGAT3Q09327 533 aa3.35□□□□□ -1.87
SKP1-209ENST00000522552 PSG5Q15238 335 aa3.35□□□□□ -1.87
SKP1-209ENST00000522552 ECSCRQ19T08 205 aa3.35□□□□□ -1.87
SKP1-209ENST00000522552 SLC36A2Q495M3 483 aa3.35□□□□□ -1.87
SKP1-209ENST00000522552 Q4G0T1 1027 aa3.35□□□□□ -1.87
SKP1-209ENST00000522552 CEP85LQ5SZL2 805 aa3.35□□□□□ -1.87
SKP1-209ENST00000522552 FRRS1Q6ZNA5 592 aa3.35□□□□□ -1.87
SKP1-209ENST00000522552 RALGPS2Q86X27 583 aaPredicted RBP3.35□□□□□ -1.87
SKP1-209ENST00000522552 ENTHD1Q8IYW4 607 aa3.35□□□□□ -1.87
SKP1-209ENST00000522552 PGAM4Q8N0Y7 254 aa3.35□□□□□ -1.87
SKP1-209ENST00000522552 PDIK1LQ8N165 341 aa3.35□□□□□ -1.87
SKP1-209ENST00000522552 C2orf73Q8N5S3 287 aaPredicted RBP3.35□□□□□ -1.87
SKP1-209ENST00000522552 SUMF1Q8NBK3 374 aa3.35□□□□□ -1.87
SKP1-209ENST00000522552 ZNRF1Q8ND25 227 aa3.35□□□□□ -1.87
SKP1-209ENST00000522552 OR5T2Q8NGG2 359 aa3.35□□□□□ -1.87
SKP1-209ENST00000522552 OR2T11Q8NH01 316 aa3.35□□□□□ -1.87
SKP1-209ENST00000522552 TMED6Q8WW62 240 aa3.35□□□□□ -1.87
SKP1-209ENST00000522552 OR5B12Q96R08 314 aa3.35□□□□□ -1.87
SKP1-209ENST00000522552 MCCC1Q96RQ3 725 aaPredicted RBP3.35□□□□□ -1.87
SKP1-209ENST00000522552 SORT1Q99523 831 aa3.35□□□□□ -1.87
SKP1-209ENST00000522552 KRTAP9-3Q9BYQ3 159 aa3.35□□□□□ -1.87
SKP1-209ENST00000522552 PORCNQ9H237 461 aa3.35□□□□□ -1.87
SKP1-209ENST00000522552 OR51B6Q9H340 312 aa3.35□□□□□ -1.87
SKP1-209ENST00000522552 CENPHQ9H3R5 247 aa3.35□□□□□ -1.87
SKP1-209ENST00000522552 RNF41Q9H4P4 317 aaPredicted RBP3.35□□□□□ -1.87
SKP1-209ENST00000522552 ZNF385DQ9H6B1 395 aa3.35□□□□□ -1.87
SKP1-209ENST00000522552 TMEM38AQ9H6F2 299 aa3.35□□□□□ -1.87
SKP1-209ENST00000522552 UBE2ZQ9H832 354 aaPredicted RBP3.35□□□□□ -1.87
SKP1-209ENST00000522552 SP140LQ9H930 580 aa3.35□□□□□ -1.87
SKP1-209ENST00000522552 ABCB10Q9NRK6 738 aa3.35□□□□□ -1.87
SKP1-209ENST00000522552 SLC25A37Q9NYZ2 338 aa3.35□□□□□ -1.87
SKP1-209ENST00000522552 CIDEBQ9UHD4 219 aa3.35□□□□□ -1.87
SKP1-209ENST00000522552 FBXL3Q9UKT7 428 aa3.35□□□□□ -1.87
SKP1-209ENST00000522552 FAF1Q9UNN5 650 aaPredicted RBP3.35□□□□□ -1.87
SKP1-209ENST00000522552 MRPS18CQ9Y3D5 142 aaKnown RBP3.35□□□□□ -1.87
SKP1-209ENST00000522552 POLR3HQ9Y535 204 aaPredicted RBP3.35□□□□□ -1.87
SKP1-209ENST00000522552 IGLV3-22A0A075B6J6 115 aa3.34□□□□□ -1.87
SKP1-209ENST00000522552 TRBV5-4A0A0C4DH59 114 aa3.34□□□□□ -1.87
SKP1-209ENST00000522552 A0A1W2PR80 420 aa3.34□□□□□ -1.87
SKP1-209ENST00000522552 USP27XA6NNY8 438 aa3.34□□□□□ -1.87
SKP1-209ENST00000522552 RNF212BA8MTL3 300 aa3.34□□□□□ -1.87
SKP1-209ENST00000522552 A8MX80 341 aa3.34□□□□□ -1.87
SKP1-209ENST00000522552 SEC14L6B5MCN3 397 aa3.34□□□□□ -1.87
SKP1-209ENST00000522552 SLCO1B7G3V0H7 640 aa3.34□□□□□ -1.87
SKP1-209ENST00000522552 H3BQV1 296 aa3.34□□□□□ -1.87
SKP1-209ENST00000522552 PLPP3O14495 311 aa3.34□□□□□ -1.87
SKP1-209ENST00000522552 DYNC1I1O14576 645 aa3.34□□□□□ -1.87
SKP1-209ENST00000522552 ATP8B1O43520 1251 aa3.34□□□□□ -1.87
SKP1-209ENST00000522552 BUB3O43684 328 aa3.34□□□□□ -1.87
SKP1-209ENST00000522552 ENSAO43768 121 aaKnown RBP3.34□□□□□ -1.87
SKP1-209ENST00000522552 NARSO43776 548 aaKnown RBP3.34□□□□□ -1.87
SKP1-209ENST00000522552 ALOX12BO75342 701 aa3.34□□□□□ -1.87
SKP1-209ENST00000522552 TRAPPC6AO75865 159 aa3.34□□□□□ -1.87
SKP1-209ENST00000522552 IGHV2-5P01817 119 aa3.34□□□□□ -1.87
SKP1-209ENST00000522552 CRYABP02511 175 aaKnown RBP3.34□□□□□ -1.87
SKP1-209ENST00000522552 SERPINB2P05120 415 aa3.34□□□□□ -1.87
SKP1-209ENST00000522552 RPS17P08708 135 aaKnown RBP3.34□□□□□ -1.87
SKP1-209ENST00000522552 OCM2P0CE71 109 aa3.34□□□□□ -1.87
SKP1-209ENST00000522552 ZNF12P17014 697 aa3.34□□□□□ -1.87
SKP1-209ENST00000522552 CSNK2A2P19784 350 aaPredicted RBP3.34□□□□□ -1.87
SKP1-209ENST00000522552 BCL3P20749 454 aa3.34□□□□□ -1.87
SKP1-209ENST00000522552 HTR1FP30939 366 aa3.34□□□□□ -1.87
SKP1-209ENST00000522552 FCGR2CP31995 323 aa3.34□□□□□ -1.87
SKP1-209ENST00000522552 GNG10P50151 68 aa3.34□□□□□ -1.87
SKP1-209ENST00000522552 SERPINB8P50452 374 aa3.34□□□□□ -1.87
SKP1-209ENST00000522552 ATP4BP51164 291 aa3.34□□□□□ -1.87
SKP1-209ENST00000522552 PRELPP51888 382 aa3.34□□□□□ -1.87
SKP1-209ENST00000522552 CRYBA2P53672 197 aa3.34□□□□□ -1.87
SKP1-209ENST00000522552 DLX5P56178 289 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms