RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 Q96M85 177 aa14.91□□□□□ -0.02
PCDHA3-201ENST00000522353 MAST2Q6P0Q8 1798 aa14.91□□□□□ -0.02
PCDHA3-201ENST00000522353 ZNF891A8MT65 544 aaPredicted RBP14.91□□□□□ -0.02
PCDHA3-201ENST00000522353 A8MXE2 369 aa14.91□□□□□ -0.02
PCDHA3-201ENST00000522353 MBTPS2O43462 519 aa14.91□□□□□ -0.02
PCDHA3-201ENST00000522353 STK17BO94768 372 aa14.91□□□□□ -0.02
PCDHA3-201ENST00000522353 IGHV3-9P01782 118 aa14.91□□□□□ -0.02
PCDHA3-201ENST00000522353 GM2AP17900 193 aa14.91□□□□□ -0.02
PCDHA3-201ENST00000522353 PNLIPRP2P54317 469 aa14.91□□□□□ -0.02
PCDHA3-201ENST00000522353 LILRA6Q6PI73 481 aa14.91□□□□□ -0.02
PCDHA3-201ENST00000522353 PTRH1Q86Y79 214 aaKnown RBP14.91□□□□□ -0.02
PCDHA3-201ENST00000522353 SNX11Q9Y5W9 270 aa14.91□□□□□ -0.02
PCDHA3-201ENST00000522353 MAP2K6P52564 334 aa14.91□□□□□ -0.02
PCDHA3-201ENST00000522353 SRPXP78539 464 aa14.91□□□□□ -0.02
PCDHA3-201ENST00000522353 RUNX2Q13950 521 aa14.91□□□□□ -0.02
PCDHA3-201ENST00000522353 TMEM207Q6UWW9 146 aa14.91□□□□□ -0.02
PCDHA3-201ENST00000522353 SLC46A3Q7Z3Q1 461 aa14.91□□□□□ -0.02
PCDHA3-201ENST00000522353 OR2M2Q96R28 347 aa14.91□□□□□ -0.02
PCDHA3-201ENST00000522353 PRELID1Q9Y255 219 aa14.91□□□□□ -0.02
PCDHA3-201ENST00000522353 TIMM10BQ9Y5J6 103 aa14.91□□□□□ -0.02
PCDHA3-201ENST00000522353 KLK4Q9Y5K2 254 aa14.91□□□□□ -0.02
PCDHA3-201ENST00000522353 ATP23Q9Y6H3 246 aa14.91□□□□□ -0.02
PCDHA3-201ENST00000522353 TNK1Q13470 666 aa14.91□□□□□ -0.02
PCDHA3-201ENST00000522353 YIF1BQ5BJH7 314 aa14.91□□□□□ -0.02
PCDHA3-201ENST00000522353 XKR7Q5GH72 579 aa14.91□□□□□ -0.02
PCDHA3-201ENST00000522353 KRBOX4Q5JUW0 171 aa14.91□□□□□ -0.02
PCDHA3-201ENST00000522353 SAXO2Q658L1 398 aa14.91□□□□□ -0.02
PCDHA3-201ENST00000522353 Q6ZTK2 550 aa14.91□□□□□ -0.02
PCDHA3-201ENST00000522353 PFDN5Q99471 154 aa14.91□□□□□ -0.02
PCDHA3-201ENST00000522353 LRRC61Q9BV99 259 aa14.91□□□□□ -0.02
PCDHA3-201ENST00000522353 PSORS1C1Q9UIG5 152 aa14.91□□□□□ -0.02
PCDHA3-201ENST00000522353 A0A087WV62 115 aa14.9□□□□□ -0.02
PCDHA3-201ENST00000522353 CTSLP07711 333 aa14.9□□□□□ -0.02
PCDHA3-201ENST00000522353 ARR3P36575 388 aa14.9□□□□□ -0.02
PCDHA3-201ENST00000522353 CCL7P80098 99 aa14.9□□□□□ -0.02
PCDHA3-201ENST00000522353 SPEM2Q0P670 501 aa14.9□□□□□ -0.02
PCDHA3-201ENST00000522353 CAMK2BQ13554 666 aa14.9□□□□□ -0.02
PCDHA3-201ENST00000522353 SLC23A2Q9UGH3 650 aa14.9□□□□□ -0.02
PCDHA3-201ENST00000522353 A0A087WZY1 265 aa14.9□□□□□ -0.02
PCDHA3-201ENST00000522353 TRBV5-4A0A0C4DH59 114 aa14.9□□□□□ -0.02
PCDHA3-201ENST00000522353 MT-ND4P03905 459 aa14.9□□□□□ -0.02
PCDHA3-201ENST00000522353 EVI2BP34910 448 aa14.9□□□□□ -0.02
PCDHA3-201ENST00000522353 WDR88Q6ZMY6 472 aa14.9□□□□□ -0.02
PCDHA3-201ENST00000522353 CRLF2Q9HC73 371 aa14.9□□□□□ -0.02
PCDHA3-201ENST00000522353 GFOD1Q9NXC2 390 aa14.9□□□□□ -0.02
PCDHA3-201ENST00000522353 DIMT1Q9UNQ2 313 aaKnown RBP14.9□□□□□ -0.02
PCDHA3-201ENST00000522353 BRWD1Q9NSI6 2320 aa14.9□□□□□ -0.02
PCDHA3-201ENST00000522353 TRAV17A0A0B4J275 112 aa14.9□□□□□ -0.02
PCDHA3-201ENST00000522353 TMPRSS11DO60235 418 aa14.9□□□□□ -0.02
PCDHA3-201ENST00000522353 LGI1O95970 557 aa14.9□□□□□ -0.02
PCDHA3-201ENST00000522353 HTR4Q13639 388 aa14.9□□□□□ -0.02
PCDHA3-201ENST00000522353 IHHQ14623 411 aa14.9□□□□□ -0.02
PCDHA3-201ENST00000522353 FCRL6Q6DN72 434 aa14.9□□□□□ -0.02
PCDHA3-201ENST00000522353 Q6ZPB1 254 aaPredicted RBP14.9□□□□□ -0.02
PCDHA3-201ENST00000522353 ZNF679Q8IYX0 411 aa14.9□□□□□ -0.02
PCDHA3-201ENST00000522353 TTC9Q92623 222 aa14.9□□□□□ -0.02
PCDHA3-201ENST00000522353 SPACA1Q9HBV2 294 aa14.9□□□□□ -0.02
PCDHA3-201ENST00000522353 KCNJ16Q9NPI9 418 aa14.9□□□□□ -0.02
PCDHA3-201ENST00000522353 RCE1Q9Y256 329 aa14.9□□□□□ -0.02
PCDHA3-201ENST00000522353 COA3Q9Y2R0 106 aaPredicted RBP14.9□□□□□ -0.02
PCDHA3-201ENST00000522353 MEIOCA2RUB1 952 aa14.9□□□□□ -0.02
PCDHA3-201ENST00000522353 GRPP07492 148 aa14.9□□□□□ -0.02
PCDHA3-201ENST00000522353 ALDH3B1P43353 468 aa14.9□□□□□ -0.02
PCDHA3-201ENST00000522353 OR5M1Q8NGP8 315 aa14.9□□□□□ -0.02
PCDHA3-201ENST00000522353 RHOXF1Q8NHV9 184 aa14.9□□□□□ -0.02
PCDHA3-201ENST00000522353 ABHD4Q8TB40 342 aa14.9□□□□□ -0.02
PCDHA3-201ENST00000522353 MALSU1Q96EH3 234 aa14.9□□□□□ -0.02
PCDHA3-201ENST00000522353 HRH3Q9Y5N1 445 aa14.9□□□□□ -0.02
PCDHA3-201ENST00000522353 HSPB6O14558 160 aa14.89□□□□□ -0.03
PCDHA3-201ENST00000522353 MT-CO3P00414 261 aa14.89□□□□□ -0.03
PCDHA3-201ENST00000522353 EDN3P14138 238 aa14.89□□□□□ -0.03
PCDHA3-201ENST00000522353 NKX2-5P52952 324 aaPredicted RBP14.89□□□□□ -0.03
PCDHA3-201ENST00000522353 HES1Q14469 280 aa14.89□□□□□ -0.03
PCDHA3-201ENST00000522353 C1orf87Q8N0U7 546 aa14.89□□□□□ -0.03
PCDHA3-201ENST00000522353 PARP16Q8N5Y8 322 aa14.89□□□□□ -0.03
PCDHA3-201ENST00000522353 BEST4Q8NFU0 473 aa14.89□□□□□ -0.03
PCDHA3-201ENST00000522353 SEMA6DQ8NFY4 1073 aa14.89□□□□□ -0.03
PCDHA3-201ENST00000522353 RASD2Q96D21 266 aa14.89□□□□□ -0.03
PCDHA3-201ENST00000522353 SSX3Q99909 188 aa14.89□□□□□ -0.03
PCDHA3-201ENST00000522353 AMBRA1Q9C0C7 1298 aa14.89□□□□□ -0.03
PCDHA3-201ENST00000522353 USP22Q9UPT9 525 aa14.89□□□□□ -0.03
PCDHA3-201ENST00000522353 C1orf210Q8IVY1 113 aa14.89□□□□□ -0.03
PCDHA3-201ENST00000522353 FAM71CQ8NEG0 241 aa14.89□□□□□ -0.03
PCDHA3-201ENST00000522353 OR6M1Q8NGM8 313 aa14.89□□□□□ -0.03
PCDHA3-201ENST00000522353 C16orf52Q8NHV5 167 aa14.89□□□□□ -0.03
PCDHA3-201ENST00000522353 RNF170Q96K19 258 aa14.89□□□□□ -0.03
PCDHA3-201ENST00000522353 MRGPRX4Q96LA9 322 aa14.89□□□□□ -0.03
PCDHA3-201ENST00000522353 NDUFAF4Q9P032 175 aa14.89□□□□□ -0.03
PCDHA3-201ENST00000522353 ANKRD33BA6NCL7 494 aa14.89□□□□□ -0.03
PCDHA3-201ENST00000522353 FZD6O60353 706 aa14.89□□□□□ -0.03
PCDHA3-201ENST00000522353 HLA-AP01891 365 aaKnown RBP14.89□□□□□ -0.03
PCDHA3-201ENST00000522353 BTG2P78543 158 aa14.89□□□□□ -0.03
PCDHA3-201ENST00000522353 B3GLCTQ6Y288 498 aa14.89□□□□□ -0.03
PCDHA3-201ENST00000522353 SCCPDHQ8NBX0 429 aa14.89□□□□□ -0.03
PCDHA3-201ENST00000522353 YBX2Q9Y2T7 364 aaKnown RBP14.89□□□□□ -0.03
PCDHA3-201ENST00000522353 ARID1BQ8NFD5 2236 aaPredicted RBP14.89□□□□□ -0.03
PCDHA3-201ENST00000522353 TNFRSF10AO00220 468 aa14.89□□□□□ -0.03
PCDHA3-201ENST00000522353 OR2J2O76002 312 aa14.89□□□□□ -0.03
PCDHA3-201ENST00000522353 MTNR1BP49286 362 aa14.89□□□□□ -0.03
PCDHA3-201ENST00000522353 TAS2R30P59541 319 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms