RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 SPDL1Q96EA4 605 aa2.8□□□□□ -1.96
VPS13B-209ENST00000521559 MAGED4Q96JG8 741 aa2.8□□□□□ -1.96
VPS13B-209ENST00000521559 VSTM2LQ96N03 204 aa2.8□□□□□ -1.96
VPS13B-209ENST00000521559 CCDC115Q96NT0 180 aa2.8□□□□□ -1.96
VPS13B-209ENST00000521559 AGAP4Q96P64 663 aa2.8□□□□□ -1.96
VPS13B-209ENST00000521559 GFI1Q99684 422 aa2.8□□□□□ -1.96
VPS13B-209ENST00000521559 NPAS2Q99743 824 aa2.8□□□□□ -1.96
VPS13B-209ENST00000521559 INPP5KQ9BT40 448 aa2.8□□□□□ -1.96
VPS13B-209ENST00000521559 LMF2Q9BU23 707 aaKnown RBP2.8□□□□□ -1.96
VPS13B-209ENST00000521559 SLC25A23Q9BV35 468 aa2.8□□□□□ -1.96
VPS13B-209ENST00000521559 TRIM4Q9C037 500 aa2.8□□□□□ -1.96
VPS13B-209ENST00000521559 NMUR2Q9GZQ4 415 aa2.8□□□□□ -1.96
VPS13B-209ENST00000521559 WWTR1Q9GZV5 400 aa2.8□□□□□ -1.96
VPS13B-209ENST00000521559 PPIL3Q9H2H8 161 aaKnown RBP2.8□□□□□ -1.96
VPS13B-209ENST00000521559 ADNPQ9H2P0 1102 aa2.8□□□□□ -1.96
VPS13B-209ENST00000521559 TRIM45Q9H8W5 580 aaPredicted RBP2.8□□□□□ -1.96
VPS13B-209ENST00000521559 ANKRA2Q9H9E1 313 aa2.8□□□□□ -1.96
VPS13B-209ENST00000521559 FOLH1BQ9HBA9 442 aa2.8□□□□□ -1.96
VPS13B-209ENST00000521559 DDX18Q9NVP1 670 aaKnown RBP2.8□□□□□ -1.96
VPS13B-209ENST00000521559 GIN1Q9NXP7 522 aa2.8□□□□□ -1.96
VPS13B-209ENST00000521559 GPR83Q9NYM4 423 aa2.8□□□□□ -1.96
VPS13B-209ENST00000521559 TAS2R9Q9NYW1 312 aa2.8□□□□□ -1.96
VPS13B-209ENST00000521559 STMN3Q9NZ72 180 aa2.8□□□□□ -1.96
VPS13B-209ENST00000521559 CCDC167Q9P0B6 97 aa2.8□□□□□ -1.96
VPS13B-209ENST00000521559 CRNNQ9UBG3 495 aaPredicted RBP2.8□□□□□ -1.96
VPS13B-209ENST00000521559 BCAP29Q9UHQ4 241 aa2.8□□□□□ -1.96
VPS13B-209ENST00000521559 TEKT2Q9UIF3 430 aa2.8□□□□□ -1.96
VPS13B-209ENST00000521559 ANAPC2Q9UJX6 822 aa2.8□□□□□ -1.96
VPS13B-209ENST00000521559 ZNF223Q9UK11 482 aaPredicted RBP2.8□□□□□ -1.96
VPS13B-209ENST00000521559 MRPS28Q9Y2Q9 187 aaKnown RBP2.8□□□□□ -1.96
VPS13B-209ENST00000521559 YARS2Q9Y2Z4 477 aaKnown RBP2.8□□□□□ -1.96
VPS13B-209ENST00000521559 NDUFAF1Q9Y375 327 aa2.8□□□□□ -1.96
VPS13B-209ENST00000521559 PIKFYVEQ9Y2I7 2098 aa2.8□□□□□ -1.96
VPS13B-209ENST00000521559 KNTC1P50748 2209 aa2.79□□□□□ -1.96
VPS13B-209ENST00000521559 GOLGA4Q13439 2230 aaKnown RBP2.79□□□□□ -1.96
VPS13B-209ENST00000521559 UNC13CQ8NB66 2214 aa2.79□□□□□ -1.96
VPS13B-209ENST00000521559 GIMAP1-GIMAP5A0A087WTJ2 511 aa2.79□□□□□ -1.96
VPS13B-209ENST00000521559 LOC100653049A0A140TA62 436 aa2.79□□□□□ -1.96
VPS13B-209ENST00000521559 FRG2CA6NGY1 282 aa2.79□□□□□ -1.96
VPS13B-209ENST00000521559 BBIP1A8MTZ0 92 aa2.79□□□□□ -1.96
VPS13B-209ENST00000521559 K7EM74 188 aa2.79□□□□□ -1.96
VPS13B-209ENST00000521559 WWP2O00308 870 aa2.79□□□□□ -1.96
VPS13B-209ENST00000521559 FBP2O00757 339 aa2.79□□□□□ -1.96
VPS13B-209ENST00000521559 NDUFAB1O14561 156 aa2.79□□□□□ -1.96
VPS13B-209ENST00000521559 RFXANKO14593 260 aa2.79□□□□□ -1.96
VPS13B-209ENST00000521559 ANGPT2O15123 496 aa2.79□□□□□ -1.96
VPS13B-209ENST00000521559 TO15178 435 aa2.79□□□□□ -1.96
VPS13B-209ENST00000521559 ACOX3O15254 700 aa2.79□□□□□ -1.96
VPS13B-209ENST00000521559 NME6O75414 186 aaPredicted RBP2.79□□□□□ -1.96
VPS13B-209ENST00000521559 DCTN3O75935 186 aa2.79□□□□□ -1.96
VPS13B-209ENST00000521559 OR2J2O76002 312 aa2.79□□□□□ -1.96
VPS13B-209ENST00000521559 KRT34O76011 436 aa2.79□□□□□ -1.96
VPS13B-209ENST00000521559 WISP2O76076 250 aa2.79□□□□□ -1.96
VPS13B-209ENST00000521559 NADKO95544 446 aaPredicted RBP2.79□□□□□ -1.96
VPS13B-209ENST00000521559 ANP32DO95626 131 aa2.79□□□□□ -1.96
VPS13B-209ENST00000521559 KRT75O95678 551 aa2.79□□□□□ -1.96
VPS13B-209ENST00000521559 WDPCPO95876 746 aa2.79□□□□□ -1.96
VPS13B-209ENST00000521559 NPPAP01160 153 aa2.79□□□□□ -1.96
VPS13B-209ENST00000521559 HMGN2P05204 90 aaKnown RBP2.79□□□□□ -1.96
VPS13B-209ENST00000521559 KRT16P08779 473 aa2.79□□□□□ -1.96
VPS13B-209ENST00000521559 ALOX5P09917 674 aa2.79□□□□□ -1.96
VPS13B-209ENST00000521559 FAM157CP0CG43 387 aa2.79□□□□□ -1.96
VPS13B-209ENST00000521559 CT45A8P0DMV1 189 aa2.79□□□□□ -1.96
VPS13B-209ENST00000521559 CT45A9P0DMV2 189 aa2.79□□□□□ -1.96
VPS13B-209ENST00000521559 ACP2P11117 423 aa2.79□□□□□ -1.96
VPS13B-209ENST00000521559 COX4I1P13073 169 aa2.79□□□□□ -1.96
VPS13B-209ENST00000521559 CBLP22681 906 aa2.79□□□□□ -1.96
VPS13B-209ENST00000521559 PPIBP23284 216 aaKnown RBP2.79□□□□□ -1.96
VPS13B-209ENST00000521559 PTPN6P29350 595 aa2.79□□□□□ -1.96
VPS13B-209ENST00000521559 PRDX6P30041 224 aa2.79□□□□□ -1.96
VPS13B-209ENST00000521559 GABRA3P34903 492 aa2.79□□□□□ -1.96
VPS13B-209ENST00000521559 SOAT1P35610 550 aa2.79□□□□□ -1.96
VPS13B-209ENST00000521559 MAP3K8P41279 467 aa2.79□□□□□ -1.96
VPS13B-209ENST00000521559 CDKN2CP42773 168 aa2.79□□□□□ -1.96
VPS13B-209ENST00000521559 HLCSP50747 726 aa2.79□□□□□ -1.96
VPS13B-209ENST00000521559 PSPHP78330 225 aa2.79□□□□□ -1.96
VPS13B-209ENST00000521559 MRPS22P82650 360 aaKnown RBP2.79□□□□□ -1.96
VPS13B-209ENST00000521559 OC90Q02509 493 aaPredicted RBP2.79□□□□□ -1.96
VPS13B-209ENST00000521559 STX5Q13190 355 aa2.79□□□□□ -1.96
VPS13B-209ENST00000521559 RAPSNQ13702 412 aa2.79□□□□□ -1.96
VPS13B-209ENST00000521559 CYLC2Q14093 348 aaPredicted RBP2.79□□□□□ -1.96
VPS13B-209ENST00000521559 LASP1Q14847 261 aaKnown RBP2.79□□□□□ -1.96
VPS13B-209ENST00000521559 EBPQ15125 230 aaKnown RBP2.79□□□□□ -1.96
VPS13B-209ENST00000521559 TAF13Q15543 124 aa2.79□□□□□ -1.96
VPS13B-209ENST00000521559 ZNHIT3Q15649 155 aaPredicted RBP2.79□□□□□ -1.96
VPS13B-209ENST00000521559 SNAPC1Q16533 368 aa2.79□□□□□ -1.96
VPS13B-209ENST00000521559 DUSP5Q16690 384 aa2.79□□□□□ -1.96
VPS13B-209ENST00000521559 ZNF791Q3KP31 576 aaPredicted RBP2.79□□□□□ -1.96
VPS13B-209ENST00000521559 CT45A2Q5DJT8 189 aa2.79□□□□□ -1.96
VPS13B-209ENST00000521559 COQ5Q5HYK3 327 aa2.79□□□□□ -1.96
VPS13B-209ENST00000521559 PAGE3Q5JUK9 113 aa2.79□□□□□ -1.96
VPS13B-209ENST00000521559 SAXO2Q658L1 398 aa2.79□□□□□ -1.96
VPS13B-209ENST00000521559 FAM91A1Q658Y4 838 aa2.79□□□□□ -1.96
VPS13B-209ENST00000521559 KRT80Q6KB66 452 aa2.79□□□□□ -1.96
VPS13B-209ENST00000521559 MFSD12Q6NUT3 480 aa2.79□□□□□ -1.96
VPS13B-209ENST00000521559 OPN5Q6U736 354 aa2.79□□□□□ -1.96
VPS13B-209ENST00000521559 DLEU7Q6UYE1 221 aa2.79□□□□□ -1.96
VPS13B-209ENST00000521559 C16orf47Q6ZP98 133 aaPredicted RBP2.79□□□□□ -1.96
VPS13B-209ENST00000521559 LINC00696Q6ZRV3 163 aa2.79□□□□□ -1.96
VPS13B-209ENST00000521559 NUP54Q7Z3B4 507 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms