RNA–Protein interactions for RNA: ENST00000520286.5

LSM1-202, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best)

Gene LSM1, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-202ENST00000520286 CSGALNACT2Q8N6G5 542 aa5.66□□□□□ -1.5
LSM1-202ENST00000520286 OR52K2Q8NGK3 314 aa5.66□□□□□ -1.5
LSM1-202ENST00000520286 OR2L2Q8NH16 312 aa5.66□□□□□ -1.5
LSM1-202ENST00000520286 PAQR8Q8TEZ7 354 aa5.66□□□□□ -1.5
LSM1-202ENST00000520286 DYDC1Q8WWB3 177 aa5.66□□□□□ -1.5
LSM1-202ENST00000520286 SERPINB12Q96P63 405 aa5.66□□□□□ -1.5
LSM1-202ENST00000520286 C11orf49Q9H6J7 331 aa5.66□□□□□ -1.5
LSM1-202ENST00000520286 ZFP14Q9HCL3 533 aa5.66□□□□□ -1.5
LSM1-202ENST00000520286 RHBDL2Q9NX52 303 aa5.66□□□□□ -1.5
LSM1-202ENST00000520286 OR1A1Q9P1Q5 309 aa5.66□□□□□ -1.5
LSM1-202ENST00000520286 LGALS13Q9UHV8 139 aa5.66□□□□□ -1.5
LSM1-202ENST00000520286 UTP11Q9Y3A2 253 aaKnown RBP5.66□□□□□ -1.5
LSM1-202ENST00000520286 USH1CQ9Y6N9 552 aa5.66□□□□□ -1.5
LSM1-202ENST00000520286 ADGRA3Q8IWK6 1321 aa5.66□□□□□ -1.5
LSM1-202ENST00000520286 IGHV3-35A0A0C4DH35 117 aa5.65□□□□□ -1.5
LSM1-202ENST00000520286 SMIM28A0A1B0GU29 152 aa5.65□□□□□ -1.5
LSM1-202ENST00000520286 A0A1B0GUS0 222 aa5.65□□□□□ -1.5
LSM1-202ENST00000520286 TMEM120BA0PK00 339 aa5.65□□□□□ -1.5
LSM1-202ENST00000520286 TMEM110-MUSTN1A8MSY1 372 aa5.65□□□□□ -1.5
LSM1-202ENST00000520286 A8MXQ7 604 aa5.65□□□□□ -1.5
LSM1-202ENST00000520286 HAS3O00219 553 aa5.65□□□□□ -1.5
LSM1-202ENST00000520286 ZNF354AO60765 605 aaPredicted RBP5.65□□□□□ -1.5
LSM1-202ENST00000520286 ENTPD5O75356 428 aa5.65□□□□□ -1.5
LSM1-202ENST00000520286 ZNF254O75437 659 aa5.65□□□□□ -1.5
LSM1-202ENST00000520286 LGALS2P05162 132 aa5.65□□□□□ -1.5
LSM1-202ENST00000520286 TAC1P20366 129 aa5.65□□□□□ -1.5
LSM1-202ENST00000520286 COX5AP20674 150 aa5.65□□□□□ -1.5
LSM1-202ENST00000520286 CRABP2P29373 138 aa5.65□□□□□ -1.5
LSM1-202ENST00000520286 HNRNPA3P51991 378 aaKnown RBP5.65□□□□□ -1.5
LSM1-202ENST00000520286 SLC25A1P53007 311 aa5.65□□□□□ -1.5
LSM1-202ENST00000520286 SLC18A1P54219 525 aa5.65□□□□□ -1.5
LSM1-202ENST00000520286 SLC10A7Q0GE19 358 aa5.65□□□□□ -1.5
LSM1-202ENST00000520286 RCN1Q15293 331 aa5.65□□□□□ -1.5
LSM1-202ENST00000520286 HIGD2BQ4VC39 106 aa5.65□□□□□ -1.5
LSM1-202ENST00000520286 ACSBG2Q5FVE4 666 aa5.65□□□□□ -1.5
LSM1-202ENST00000520286 METTL11BQ5VVY1 283 aa5.65□□□□□ -1.5
LSM1-202ENST00000520286 DHRS4L2Q6PKH6 230 aa5.65□□□□□ -1.5
LSM1-202ENST00000520286 ST13P4Q8IZP2 240 aaPredicted RBP5.65□□□□□ -1.5
LSM1-202ENST00000520286 SVOPLQ8N434 492 aa5.65□□□□□ -1.5
LSM1-202ENST00000520286 OR2A12Q8NGT7 310 aa5.65□□□□□ -1.5
LSM1-202ENST00000520286 C10orf82Q8WW14 230 aa5.65□□□□□ -1.5
LSM1-202ENST00000520286 C1orf147Q96MC9 270 aaPredicted RBP5.65□□□□□ -1.5
LSM1-202ENST00000520286 SLITRK2Q9H156 845 aa5.65□□□□□ -1.5
LSM1-202ENST00000520286 EURLQ9NYK6 297 aa5.65□□□□□ -1.5
LSM1-202ENST00000520286 BFARQ9NZS9 450 aa5.65□□□□□ -1.5
LSM1-202ENST00000520286 PACSIN2Q9UNF0 486 aaPredicted RBP5.65□□□□□ -1.5
LSM1-202ENST00000520286 COPS3Q9UNS2 423 aa5.65□□□□□ -1.5
LSM1-202ENST00000520286 PLLPQ9Y342 182 aa5.65□□□□□ -1.5
LSM1-202ENST00000520286 MYH3P11055 1940 aa5.65□□□□□ -1.51
LSM1-202ENST00000520286 CENPFP49454 3210 aa5.65□□□□□ -1.51
LSM1-202ENST00000520286 LAMA3Q16787 3333 aa5.64□□□□□ -1.51
LSM1-202ENST00000520286 IDSB3KWA1 339 aa5.64□□□□□ -1.51
LSM1-202ENST00000520286 SERPINB7O75635 380 aa5.64□□□□□ -1.51
LSM1-202ENST00000520286 LYPD3O95274 346 aa5.64□□□□□ -1.51
LSM1-202ENST00000520286 STSP08842 583 aa5.64□□□□□ -1.51
LSM1-202ENST00000520286 SFTPCP11686 197 aa5.64□□□□□ -1.51
LSM1-202ENST00000520286 VDAC1P21796 283 aa5.64□□□□□ -1.51
LSM1-202ENST00000520286 FOXN2P32314 431 aa5.64□□□□□ -1.51
LSM1-202ENST00000520286 GTF2H1P32780 548 aa5.64□□□□□ -1.51
LSM1-202ENST00000520286 RAP1GDS1P52306 607 aa5.64□□□□□ -1.51
LSM1-202ENST00000520286 CRYBB1P53674 252 aaPredicted RBP5.64□□□□□ -1.51
LSM1-202ENST00000520286 RPS14P62263 151 aaKnown RBP5.64□□□□□ -1.51
LSM1-202ENST00000520286 XIAPP98170 497 aa5.64□□□□□ -1.51
LSM1-202ENST00000520286 CDK16Q00536 496 aa5.64□□□□□ -1.51
LSM1-202ENST00000520286 ARMC12Q5T9G4 340 aa5.64□□□□□ -1.51
LSM1-202ENST00000520286 TMEM53Q6P2H8 277 aa5.64□□□□□ -1.51
LSM1-202ENST00000520286 METAP1DQ6UB28 335 aaPredicted RBP5.64□□□□□ -1.51
LSM1-202ENST00000520286 TRMT10CQ7L0Y3 403 aaKnown RBP5.64□□□□□ -1.51
LSM1-202ENST00000520286 NT5DC3Q86UY8 548 aa5.64□□□□□ -1.51
LSM1-202ENST00000520286 ZBED8Q8IZ13 594 aa5.64□□□□□ -1.51
LSM1-202ENST00000520286 MYOCDQ8IZQ8 938 aa5.64□□□□□ -1.51
LSM1-202ENST00000520286 CADM2Q8N3J6 435 aa5.64□□□□□ -1.51
LSM1-202ENST00000520286 HTR3CQ8WXA8 447 aa5.64□□□□□ -1.51
LSM1-202ENST00000520286 ST8SIA1Q92185 356 aa5.64□□□□□ -1.51
LSM1-202ENST00000520286 ESR2Q92731 530 aa5.64□□□□□ -1.51
LSM1-202ENST00000520286 HAUS1Q96CS2 278 aa5.64□□□□□ -1.51
LSM1-202ENST00000520286 CXorf40BQ96DE9 158 aa5.64□□□□□ -1.51
LSM1-202ENST00000520286 DGCR14Q96DF8 476 aaKnown RBP5.64□□□□□ -1.51
LSM1-202ENST00000520286 TGS1Q96RS0 853 aaKnown RBP5.64□□□□□ -1.51
LSM1-202ENST00000520286 ATOH8Q96SQ7 321 aa5.64□□□□□ -1.51
LSM1-202ENST00000520286 CGREF1Q99674 301 aa5.64□□□□□ -1.51
LSM1-202ENST00000520286 ECSITQ9BQ95 431 aa5.64□□□□□ -1.51
LSM1-202ENST00000520286 SLC2A8Q9NY64 477 aa5.64□□□□□ -1.51
LSM1-202ENST00000520286 PPIAL4EA0A075B759 164 aa5.63□□□□□ -1.51
LSM1-202ENST00000520286 A0A087X0T9 212 aa5.63□□□□□ -1.51
LSM1-202ENST00000520286 EDF1O60869 148 aaKnown RBP5.63□□□□□ -1.51
LSM1-202ENST00000520286 WBP4O75554 376 aaKnown RBP5.63□□□□□ -1.51
LSM1-202ENST00000520286 FGFR1OPO95684 399 aaKnown RBP5.63□□□□□ -1.51
LSM1-202ENST00000520286 LALBAP00709 142 aa5.63□□□□□ -1.51
LSM1-202ENST00000520286 FAM228BP0C875 321 aa5.63□□□□□ -1.51
LSM1-202ENST00000520286 UBTFL6P0CB48 400 aaPredicted RBP5.63□□□□□ -1.51
LSM1-202ENST00000520286 PPIAL4FP0DN26 164 aa5.63□□□□□ -1.51
LSM1-202ENST00000520286 ATP1B2P14415 290 aaPredicted RBP5.63□□□□□ -1.51
LSM1-202ENST00000520286 CCNCP24863 283 aa5.63□□□□□ -1.51
LSM1-202ENST00000520286 KIR2DS2P43631 304 aa5.63□□□□□ -1.51
LSM1-202ENST00000520286 VEGFCP49767 419 aa5.63□□□□□ -1.51
LSM1-202ENST00000520286 DR1Q01658 176 aa5.63□□□□□ -1.51
LSM1-202ENST00000520286 GBE1Q04446 702 aa5.63□□□□□ -1.51
LSM1-202ENST00000520286 MRPL28Q13084 256 aaKnown RBP5.63□□□□□ -1.51
LSM1-202ENST00000520286 SRSF5Q13243 272 aaKnown RBP5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 163 ms