RNA–Protein interactions for RNA: ENST00000520142.1

PABPC1-214, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 754 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-214ENST00000520142 LRR1Q96L50 414 aa9.73□□□□□ -0.85
PABPC1-214ENST00000520142 ALKBH3Q96Q83 286 aaPredicted RBP9.73□□□□□ -0.85
PABPC1-214ENST00000520142 FUZQ9BT04 418 aa9.73□□□□□ -0.85
PABPC1-214ENST00000520142 PRRG3Q9BZD7 231 aa9.73□□□□□ -0.85
PABPC1-214ENST00000520142 ESRP2Q9H6T0 727 aaKnown RBP9.73□□□□□ -0.85
PABPC1-214ENST00000520142 NGBQ9NPG2 151 aa9.73□□□□□ -0.85
PABPC1-214ENST00000520142 NANSQ9NR45 359 aa9.73□□□□□ -0.85
PABPC1-214ENST00000520142 PAPOLBQ9NRJ5 636 aaKnown RBP9.73□□□□□ -0.85
PABPC1-214ENST00000520142 KRT84Q9NSB2 600 aa9.73□□□□□ -0.85
PABPC1-214ENST00000520142 MED29Q9NX70 200 aa9.73□□□□□ -0.85
PABPC1-214ENST00000520142 VNN3Q9NY84 501 aa9.73□□□□□ -0.85
PABPC1-214ENST00000520142 ITGB1BP2Q9UKP3 347 aa9.73□□□□□ -0.85
PABPC1-214ENST00000520142 EDARQ9UNE0 448 aa9.73□□□□□ -0.85
PABPC1-214ENST00000520142 HSPE1-MOB4S4R3N1 261 aa9.73□□□□□ -0.85
PABPC1-214ENST00000520142 ITPR3Q14573 2671 aa9.73□□□□□ -0.85
PABPC1-214ENST00000520142 MAP1AP78559 2803 aaPredicted RBP9.72□□□□□ -0.85
PABPC1-214ENST00000520142 ARPC4-TTLL3A0A0A6YYG9 625 aa9.72□□□□□ -0.85
PABPC1-214ENST00000520142 A0A1W2PR80 420 aa9.72□□□□□ -0.85
PABPC1-214ENST00000520142 SLC35F4A4IF30 521 aa9.72□□□□□ -0.85
PABPC1-214ENST00000520142 SAC3D1A6NKF1 404 aa9.72□□□□□ -0.85
PABPC1-214ENST00000520142 SHISA9B4DS77 424 aa9.72□□□□□ -0.85
PABPC1-214ENST00000520142 ZNF587BE7ETH6 402 aa9.72□□□□□ -0.85
PABPC1-214ENST00000520142 KPNA4O00629 521 aaPredicted RBP9.72□□□□□ -0.85
PABPC1-214ENST00000520142 SLC16A6O15403 523 aa9.72□□□□□ -0.85
PABPC1-214ENST00000520142 MPZL2O60487 215 aa9.72□□□□□ -0.85
PABPC1-214ENST00000520142 SLC43A1O75387 559 aa9.72□□□□□ -0.85
PABPC1-214ENST00000520142 OR7A10O76100 309 aa9.72□□□□□ -0.85
PABPC1-214ENST00000520142 GASTP01350 101 aa9.72□□□□□ -0.85
PABPC1-214ENST00000520142 OSMP13725 252 aa9.72□□□□□ -0.85
PABPC1-214ENST00000520142 FUT1P19526 365 aa9.72□□□□□ -0.85
PABPC1-214ENST00000520142 IGFBP5P24593 272 aa9.72□□□□□ -0.85
PABPC1-214ENST00000520142 FPR3P25089 353 aa9.72□□□□□ -0.85
PABPC1-214ENST00000520142 ART1P52961 327 aa9.72□□□□□ -0.85
PABPC1-214ENST00000520142 PRPS1P60891 318 aa9.72□□□□□ -0.85
PABPC1-214ENST00000520142 CSNK2BP67870 215 aa9.72□□□□□ -0.85
PABPC1-214ENST00000520142 ROR2Q01974 943 aaKnown RBP9.72□□□□□ -0.85
PABPC1-214ENST00000520142 TGFBR3Q03167 851 aa9.72□□□□□ -0.85
PABPC1-214ENST00000520142 C1DQ13901 141 aaKnown RBP9.72□□□□□ -0.85
PABPC1-214ENST00000520142 KEAP1Q14145 624 aa9.72□□□□□ -0.85
PABPC1-214ENST00000520142 STK11Q15831 433 aa9.72□□□□□ -0.85
PABPC1-214ENST00000520142 TBRG1Q3YBR2 411 aa9.72□□□□□ -0.85
PABPC1-214ENST00000520142 HIKESHIQ53FT3 197 aa9.72□□□□□ -0.85
PABPC1-214ENST00000520142 C9orf135Q5VTT2 229 aa9.72□□□□□ -0.85
PABPC1-214ENST00000520142 LPCAT4Q643R3 524 aa9.72□□□□□ -0.85
PABPC1-214ENST00000520142 C20orf204Q6ZNR8 217 aa9.72□□□□□ -0.85
PABPC1-214ENST00000520142 RASSF6Q6ZTQ3 369 aa9.72□□□□□ -0.85
PABPC1-214ENST00000520142 ZNF627Q7L945 461 aa9.72□□□□□ -0.85
PABPC1-214ENST00000520142 ABHD12BQ7Z5M8 362 aaPredicted RBP9.72□□□□□ -0.85
PABPC1-214ENST00000520142 GALNT4Q8N4A0 578 aa9.72□□□□□ -0.85
PABPC1-214ENST00000520142 ZNF611Q8N823 705 aa9.72□□□□□ -0.85
PABPC1-214ENST00000520142 OR52N5Q8NH56 324 aa9.72□□□□□ -0.85
PABPC1-214ENST00000520142 BPIFA2Q96DR5 249 aa9.72□□□□□ -0.85
PABPC1-214ENST00000520142 EMC6Q9BV81 110 aa9.72□□□□□ -0.85
PABPC1-214ENST00000520142 GPR35Q9HC97 309 aa9.72□□□□□ -0.85
PABPC1-214ENST00000520142 OBP2BQ9NPH6 170 aa9.72□□□□□ -0.85
PABPC1-214ENST00000520142 BAIAP2Q9UQB8 552 aa9.72□□□□□ -0.85
PABPC1-214ENST00000520142 AMDHD2Q9Y303 409 aa9.72□□□□□ -0.85
PABPC1-214ENST00000520142 RNF115Q9Y4L5 304 aa9.72□□□□□ -0.85
PABPC1-214ENST00000520142 ROS1P08922 2347 aa9.72□□□□□ -0.85
PABPC1-214ENST00000520142 ALPK2Q86TB3 2170 aa9.71□□□□□ -0.85
PABPC1-214ENST00000520142 HS3ST1O14792 307 aa9.71□□□□□ -0.86
PABPC1-214ENST00000520142 DENRO43583 198 aaKnown RBP9.71□□□□□ -0.86
PABPC1-214ENST00000520142 AKAP8O43823 692 aaKnown RBP9.71□□□□□ -0.86
PABPC1-214ENST00000520142 IDH3BO43837 385 aa9.71□□□□□ -0.86
PABPC1-214ENST00000520142 HMGN1P05114 100 aa9.71□□□□□ -0.86
PABPC1-214ENST00000520142 CD3EP07766 207 aa9.71□□□□□ -0.86
PABPC1-214ENST00000520142 DANCRP0C864 163 aa9.71□□□□□ -0.86
PABPC1-214ENST00000520142 ADORA3P0DMS8 318 aa9.71□□□□□ -0.86
PABPC1-214ENST00000520142 HOXB1P14653 301 aaPredicted RBP9.71□□□□□ -0.86
PABPC1-214ENST00000520142 IFNGR1P15260 489 aa9.71□□□□□ -0.86
PABPC1-214ENST00000520142 PAX1P15863 534 aa9.71□□□□□ -0.86
PABPC1-214ENST00000520142 PTAFRP25105 342 aa9.71□□□□□ -0.86
PABPC1-214ENST00000520142 CD40P25942 277 aa9.71□□□□□ -0.86
PABPC1-214ENST00000520142 HOXC12P31275 282 aa9.71□□□□□ -0.86
PABPC1-214ENST00000520142 DAPP51397 102 aa9.71□□□□□ -0.86
PABPC1-214ENST00000520142 SH3BGRP55822 239 aaPredicted RBP9.71□□□□□ -0.86
PABPC1-214ENST00000520142 RPS4XP62701 263 aaKnown RBP9.71□□□□□ -0.86
PABPC1-214ENST00000520142 NPRL3Q12980 569 aa9.71□□□□□ -0.86
PABPC1-214ENST00000520142 HIST3H3Q16695 136 aa9.71□□□□□ -0.86
PABPC1-214ENST00000520142 LRRC36Q1X8D7 754 aa9.71□□□□□ -0.86
PABPC1-214ENST00000520142 ZNF770Q6IQ21 691 aaPredicted RBP9.71□□□□□ -0.86
PABPC1-214ENST00000520142 ANKRD16Q6P6B7 361 aa9.71□□□□□ -0.86
PABPC1-214ENST00000520142 ZER1Q7Z7L7 766 aa9.71□□□□□ -0.86
PABPC1-214ENST00000520142 TMEM179BQ7Z7N9 219 aa9.71□□□□□ -0.86
PABPC1-214ENST00000520142 DEPDC4Q8N2C3 294 aa9.71□□□□□ -0.86
PABPC1-214ENST00000520142 C10orf53Q8N6V4 93 aa9.71□□□□□ -0.86
PABPC1-214ENST00000520142 AQP11Q8NBQ7 271 aa9.71□□□□□ -0.86
PABPC1-214ENST00000520142 SETD9Q8NE22 299 aa9.71□□□□□ -0.86
PABPC1-214ENST00000520142 OR6X1Q8NH79 312 aa9.71□□□□□ -0.86
PABPC1-214ENST00000520142 AKAP1Q92667 903 aaKnown RBP eCLIP9.71□□□□□ -0.869e-8■■□□□ 13.6
PABPC1-214ENST00000520142 NEUROG1Q92886 237 aa9.71□□□□□ -0.86
PABPC1-214ENST00000520142 TMEM54Q969K7 222 aa9.71□□□□□ -0.86
PABPC1-214ENST00000520142 SGTBQ96EQ0 304 aa9.71□□□□□ -0.86
PABPC1-214ENST00000520142 ADAD1Q96M93 576 aaKnown RBP9.71□□□□□ -0.86
PABPC1-214ENST00000520142 SLC29A1Q99808 456 aa9.71□□□□□ -0.86
PABPC1-214ENST00000520142 APOL4Q9BPW4 351 aa9.71□□□□□ -0.86
PABPC1-214ENST00000520142 CRLF2Q9HC73 371 aa9.71□□□□□ -0.86
PABPC1-214ENST00000520142 BEX4Q9NWD9 120 aaPredicted RBP9.71□□□□□ -0.86
PABPC1-214ENST00000520142 IL20Q9NYY1 176 aa9.71□□□□□ -0.86
PABPC1-214ENST00000520142 RHCGQ9UBD6 479 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms