RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 KCNE5Q9UJ90 142 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 ZNF223Q9UK11 482 aaPredicted RBP4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 PSG11Q9UQ72 335 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 PIN4Q9Y237 131 aaKnown RBP4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 FARSAQ9Y285 508 aaKnown RBP4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 MEMO1Q9Y316 297 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 OR51B4Q9Y5P0 310 aa4.39□□□□□ -1.71
HMGB1P19-201ENST00000517578 SCN7AQ01118 1682 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 COL24A1Q17RW2 1714 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 TRAV30A0A087WSZ9 112 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 A0A087WZ62 844 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 A0A1W2PPE3 182 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 C2orf78A6NCI8 922 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 MAGEB17A8MXT2 336 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 TMEM233B4DJY2 109 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 ZNF561-AS1K7EIQ3 104 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 M0R036 132 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 GABRPO00591 440 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 SCAMP2O15127 329 aaKnown RBP4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 FMO6PO60774 539 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 PRAMEF4O60810 478 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 DNAJB6O75190 326 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 CSO75390 466 aaKnown RBP4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 CTAG2O75638 210 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 GRAP2O75791 330 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 TOX4O94842 621 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 FARS2O95363 451 aaKnown RBP4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 PDYNP01213 254 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 IGF2P01344 180 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 CD8AP01732 235 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 CRYGCP07315 174 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 SBK3P0C264 359 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 FAM86B2P0C5J1 330 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 SLC35E2P0CK97 266 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 ETFAP13804 333 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 FABP4P15090 132 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 FOSL2P15408 326 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 HLA-GP17693 338 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 ADCYAP1P18509 176 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 ELK1P19419 428 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 SERPINA2P20848 420 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 TACR2P21452 398 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 NFYBP25208 207 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 ITPKBP27987 946 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 BRS3P32247 399 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 SNCAP37840 140 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 KHKP50053 298 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 ZNF84P51523 738 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 F2RL1P55085 397 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 BIDP55957 195 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 ATP5IP56385 69 aaPredicted RBP4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 BACE1P56817 501 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 CLDN18P56856 261 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 SMIM11AP58511 58 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 RPS13P62277 151 aaKnown RBP4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 RAB11AP62491 216 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 HBA1P69905 142 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 CSNK1G2P78368 415 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 IRF9Q00978 393 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 TLE2Q04725 743 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 RAB40BQ12829 278 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 TRA2AQ13595 282 aaKnown RBP eCLIP4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 IL10RAQ13651 578 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 TMEM132DQ14C87 1099 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 RAB35Q15286 201 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 SURF1Q15526 300 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 RNF151Q2KHN1 245 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 SMIM21Q3B7S5 101 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 EIPR1Q53HC9 387 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 KHDC3LQ587J8 217 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 TECRLQ5HYJ1 363 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 ALG10BQ5I7T1 473 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 PAGE3Q5JUK9 113 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 MFSD14BQ5SR56 506 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 PRAMEF14Q5SWL7 426 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 PRAMEF9Q5VWM5 478 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 KHDRBS2Q5VWX1 349 aaKnown RBP4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 OLFML2AQ68BL7 652 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 LAIR1Q6GTX8 287 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 CYB5RLQ6IPT4 315 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 STEAP1BQ6NZ63 245 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 PGBD2Q6P3X8 592 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 ABHD17CQ6PCB6 329 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 ENPP7Q6UWV6 458 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 SERPINA13PQ6UXR4 307 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 APOOLQ6UXV4 268 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 MTSS1LQ765P7 747 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 TCF24Q7RTU0 167 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 RD3Q7Z3Z2 195 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 ADCK2Q7Z695 626 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 PIM3Q86V86 326 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 CALHM3Q86XJ0 350 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 CATSPERDQ86XM0 798 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 XYLT1Q86Y38 959 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 PTOV1Q86YD1 416 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 PHYKPLQ8IUZ5 450 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 TMEM183AQ8IXX5 376 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 HS3ST5Q8IZT8 346 aa4.38□□□□□ -1.71
HMGB1P19-201ENST00000517578 BEST3Q8N1M1 668 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms