RNA–Protein interactions for RNA: ENST00000516428.1

RNU4-54P-201, Transcript of RNA, U4 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU4-54P, Length 129 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-54P-201ENST00000516428 KLHDC1Q8N7A1 406 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 ATP6V0D2Q8N8Y2 350 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 CDRT4Q8N9R6 151 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 LRRC75AQ8NAA5 344 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 ACBD4Q8NC06 268 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 RELL2Q8NC24 303 aaPredicted RBP0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 ZNF114Q8NC26 417 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 SLC37A3Q8NCC5 494 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 ZNF740Q8NDX6 193 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 C19orf18Q8NEA5 215 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 SDR9C7Q8NEX9 313 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 BEST4Q8NFU0 473 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 TTLQ8NG68 377 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 OR4F17Q8NGA8 305 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 OR2AP1Q8NGE2 309 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 OR4D9Q8NGE8 314 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 OR56A4Q8NGH8 313 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 OR10V1Q8NGI7 309 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 OR52H1Q8NGJ2 320 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 OR1S2Q8NGQ3 325 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 OR13A1Q8NGR1 328 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 OR1K1Q8NGR3 316 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 OR2Y1Q8NGV0 311 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 OR10Z1Q8NGY1 313 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 OR2L8Q8NGY9 312 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 OR6F1Q8NGZ6 308 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 OR4Q3Q8NH05 313 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 OR4F5Q8NH21 305 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 OR52E5Q8NH55 327 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 OR51A7Q8NH64 312 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 OR1L3Q8NH93 324 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 RPLP0P6Q8NHW5 317 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 LYPD6BQ8NI32 183 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 LMO3Q8TAP4 145 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 FAM110BQ8TC76 370 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 ACTL9Q8TC94 416 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 PHOSPHO2Q8TCD6 241 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 ACER1Q8TDN7 264 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 TCP10LQ8TDR4 215 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 MRGPRDQ8TDS7 321 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 CXorf40AQ8TE69 158 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 CA5BP1Q8WTZ4 195 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 PYROXD1Q8WU10 500 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 PHF10Q8WUB8 498 aaKnown RBP0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 TFB1MQ8WVM0 346 aaKnown RBP0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 APOBEC4Q8WW27 367 aaKnown RBP0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 TMED6Q8WW62 240 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 ZNRF4Q8WWF5 429 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 ACOT11Q8WXI4 607 aaPredicted RBP0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 IFT81Q8WYA0 676 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 C22orf15Q8WYQ4 148 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 DYRK2Q92630 601 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 GTF3AQ92664 365 aaKnown RBP0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 RORBQ92753 470 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 UFD1Q92890 307 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 TOMM40LQ969M1 308 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 NEIL2Q969S2 332 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 TBRG4Q969Z0 631 aaKnown RBP eCLIP0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 RPEQ96AT9 228 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 RAD51AP1Q96B01 352 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 APH1AQ96BI3 265 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 ANKRD9Q96BM1 317 aaPredicted RBP0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 PPWD1Q96BP3 646 aaKnown RBP0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 BIRC7Q96CA5 298 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 FAF2Q96CS3 445 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 RCN3Q96D15 328 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 CMTM5Q96DZ9 223 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 MOCOSQ96EN8 888 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 DNAJA3Q96EY1 480 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 DUS3LQ96G46 650 aaKnown RBP0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 SNF8Q96H20 258 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 URB1-AS1Q96HZ7 61 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 SEC22AQ96IW7 307 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 CPB2Q96IY4 423 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 ITCHQ96J02 903 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 HSFY1Q96LI6 401 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 C17orf77Q96MU5 243 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 NOL4LQ96MY1 436 aaPredicted RBP0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 SERPINB12Q96P63 405 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 NEDD4LQ96PU5 975 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 ALKBH3Q96Q83 286 aaPredicted RBP0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 OR5B2Q96R09 309 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 OR4F4Q96R69 305 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 TAAR1Q96RJ0 339 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 TNFRSF13CQ96RJ3 184 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 NODALQ96S42 347 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 RANBP9Q96S59 729 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 CSF3RQ99062 836 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 HBEGFQ99075 208 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 RNF2Q99496 336 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 SORT1Q99523 831 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 LGMNQ99538 433 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 GPR21Q99679 349 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 OPRPNQ99935 248 aaPredicted RBP0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 HSD17B14Q9BPX1 270 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 KCTD14Q9BQ13 255 aaPredicted RBP0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 ECSITQ9BQ95 431 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 FAM173AQ9BQD7 235 aa0.49□□□□□ -2.33
RNU4-54P-201ENST00000516428 APOL2Q9BQE5 337 aa0.49□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms