RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 MOSPD2Q8NHP6 518 aa11.12□□□□□ -0.63
CLCN3-210ENST00000515420 SLC7A13Q8TCU3 470 aa11.12□□□□□ -0.63
CLCN3-210ENST00000515420 POP5Q969H6 163 aaKnown RBP11.12□□□□□ -0.63
CLCN3-210ENST00000515420 NDEL1Q9GZM8 345 aa11.12□□□□□ -0.63
CLCN3-210ENST00000515420 KRCC1Q9NPI7 259 aaPredicted RBP11.12□□□□□ -0.63
CLCN3-210ENST00000515420 MOKQ9UQ07 419 aa11.12□□□□□ -0.63
CLCN3-210ENST00000515420 EFCAB9A8MZ26 197 aa11.11□□□□□ -0.63
CLCN3-210ENST00000515420 B2RBV5 119 aa11.11□□□□□ -0.63
CLCN3-210ENST00000515420 SEC14L2O76054 403 aa11.11□□□□□ -0.63
CLCN3-210ENST00000515420 UBL3O95164 117 aa11.11□□□□□ -0.63
CLCN3-210ENST00000515420 FARS2O95363 451 aaKnown RBP11.11□□□□□ -0.63
CLCN3-210ENST00000515420 QDPRP09417 244 aa11.11□□□□□ -0.63
CLCN3-210ENST00000515420 OR8G3PP0DMU2 310 aa11.11□□□□□ -0.63
CLCN3-210ENST00000515420 BMP4P12644 408 aa11.11□□□□□ -0.63
CLCN3-210ENST00000515420 B4GALT1P15291 398 aa11.11□□□□□ -0.63
CLCN3-210ENST00000515420 ACADSP16219 412 aa11.11□□□□□ -0.63
CLCN3-210ENST00000515420 FUT4P22083 530 aa11.11□□□□□ -0.63
CLCN3-210ENST00000515420 CAPZA2P47755 286 aa11.11□□□□□ -0.63
CLCN3-210ENST00000515420 FABP6P51161 128 aa11.11□□□□□ -0.63
CLCN3-210ENST00000515420 RPL27P61353 136 aaKnown RBP11.11□□□□□ -0.63
CLCN3-210ENST00000515420 TUBA1BP68363 451 aa11.11□□□□□ -0.63
CLCN3-210ENST00000515420 TUBA4AP68366 448 aa11.11□□□□□ -0.63
CLCN3-210ENST00000515420 LSM11P83369 360 aaKnown RBP eCLIP11.11□□□□□ -0.63
CLCN3-210ENST00000515420 FHL1Q13642 323 aa11.11□□□□□ -0.63
CLCN3-210ENST00000515420 LAPTM4AQ15012 233 aa11.11□□□□□ -0.63
CLCN3-210ENST00000515420 IQCCQ4KMZ1 466 aa11.11□□□□□ -0.63
CLCN3-210ENST00000515420 C10orf128Q5T292 105 aa11.11□□□□□ -0.63
CLCN3-210ENST00000515420 TUBA1AQ71U36 451 aa11.11□□□□□ -0.63
CLCN3-210ENST00000515420 SLC22A24Q8N4F4 322 aa11.11□□□□□ -0.63
CLCN3-210ENST00000515420 LRRC75AQ8NAA5 344 aa11.11□□□□□ -0.63
CLCN3-210ENST00000515420 MCHR2Q969V1 340 aa11.11□□□□□ -0.63
CLCN3-210ENST00000515420 MCUR1Q96AQ8 359 aa11.11□□□□□ -0.63
CLCN3-210ENST00000515420 BDH2Q9BUT1 245 aa11.11□□□□□ -0.63
CLCN3-210ENST00000515420 ALG12Q9BV10 488 aa11.11□□□□□ -0.63
CLCN3-210ENST00000515420 C1orf21Q9H246 121 aa11.11□□□□□ -0.63
CLCN3-210ENST00000515420 BARX1Q9HBU1 254 aaPredicted RBP11.11□□□□□ -0.63
CLCN3-210ENST00000515420 TMEM38BQ9NVV0 291 aa11.11□□□□□ -0.63
CLCN3-210ENST00000515420 ZNF224Q9NZL3 707 aa11.11□□□□□ -0.63
CLCN3-210ENST00000515420 ACTR3BQ9P1U1 418 aa11.11□□□□□ -0.63
CLCN3-210ENST00000515420 FBXO9Q9UK97 447 aaPredicted RBP11.11□□□□□ -0.63
CLCN3-210ENST00000515420 ATP23Q9Y6H3 246 aa11.11□□□□□ -0.63
CLCN3-210ENST00000515420 VPS13CQ709C8 3753 aa11.11□□□□□ -0.63
CLCN3-210ENST00000515420 ARFGEF3Q5TH69 2177 aa11.1□□□□□ -0.63
CLCN3-210ENST00000515420 IGHV2OR16-5A0A0B4J2B6 119 aa11.1□□□□□ -0.63
CLCN3-210ENST00000515420 ZNF503-AS2A6NEH8 195 aa11.1□□□□□ -0.63
CLCN3-210ENST00000515420 A6NIZ1 184 aa11.1□□□□□ -0.63
CLCN3-210ENST00000515420 H7C417 338 aa11.1□□□□□ -0.63
CLCN3-210ENST00000515420 TRMUO75648 421 aaKnown RBP11.1□□□□□ -0.63
CLCN3-210ENST00000515420 FABP3P05413 133 aa11.1□□□□□ -0.63
CLCN3-210ENST00000515420 ZNF84P51523 738 aa11.1□□□□□ -0.63
CLCN3-210ENST00000515420 IDH3GP51553 393 aaPredicted RBP11.1□□□□□ -0.63
CLCN3-210ENST00000515420 RAP1BP61224 184 aa11.1□□□□□ -0.63
CLCN3-210ENST00000515420 RAP1AP62834 184 aa11.1□□□□□ -0.63
CLCN3-210ENST00000515420 CHRNB3Q05901 458 aa11.1□□□□□ -0.63
CLCN3-210ENST00000515420 ZBED5Q49AG3 693 aa11.1□□□□□ -0.63
CLCN3-210ENST00000515420 FGD3Q5JSP0 725 aa11.1□□□□□ -0.63
CLCN3-210ENST00000515420 PODNL1Q6PEZ8 512 aa11.1□□□□□ -0.63
CLCN3-210ENST00000515420 TBPL2Q6SJ96 375 aa11.1□□□□□ -0.63
CLCN3-210ENST00000515420 MDP1Q86V88 176 aa11.1□□□□□ -0.63
CLCN3-210ENST00000515420 NMD3Q96D46 503 aaKnown RBP11.1□□□□□ -0.63
CLCN3-210ENST00000515420 C18orf12Q96KH6 178 aa11.1□□□□□ -0.63
CLCN3-210ENST00000515420 Q96MF0 132 aa11.1□□□□□ -0.63
CLCN3-210ENST00000515420 ZNF75AQ96N20 296 aa11.1□□□□□ -0.63
CLCN3-210ENST00000515420 ZNF347Q96SE7 839 aa11.1□□□□□ -0.63
CLCN3-210ENST00000515420 KCNK17Q96T54 332 aa11.1□□□□□ -0.63
CLCN3-210ENST00000515420 FUZQ9BT04 418 aa11.1□□□□□ -0.63
CLCN3-210ENST00000515420 ZNF442Q9H7R0 627 aa11.1□□□□□ -0.63
CLCN3-210ENST00000515420 IL1RAPQ9NPH3 570 aa11.1□□□□□ -0.63
CLCN3-210ENST00000515420 CA10Q9NS85 328 aa11.1□□□□□ -0.63
CLCN3-210ENST00000515420 PRPF19Q9UMS4 504 aaKnown RBP11.1□□□□□ -0.63
CLCN3-210ENST00000515420 TRAV27A0A087WT01 109 aa11.09□□□□□ -0.63
CLCN3-210ENST00000515420 hCG_2039718K7EN88 272 aa11.09□□□□□ -0.63
CLCN3-210ENST00000515420 CDC42EP2O14613 210 aa11.09□□□□□ -0.63
CLCN3-210ENST00000515420 RAB36O95755 333 aa11.09□□□□□ -0.63
CLCN3-210ENST00000515420 HLA-HP01893 362 aa11.09□□□□□ -0.63
CLCN3-210ENST00000515420 T-ENOLP0DO92 83 aa11.09□□□□□ -0.63
CLCN3-210ENST00000515420 CD79AP11912 226 aa11.09□□□□□ -0.63
CLCN3-210ENST00000515420 ZNF14P17017 642 aaPredicted RBP11.09□□□□□ -0.63
CLCN3-210ENST00000515420 CALCRP30988 508 aa11.09□□□□□ -0.63
CLCN3-210ENST00000515420 MSX2P35548 267 aaPredicted RBP11.09□□□□□ -0.63
CLCN3-210ENST00000515420 CDKN1AP38936 164 aa11.09□□□□□ -0.63
CLCN3-210ENST00000515420 LIMS1P48059 325 aa11.09□□□□□ -0.63
CLCN3-210ENST00000515420 CTXN1P60606 82 aa11.09□□□□□ -0.63
CLCN3-210ENST00000515420 RAB1AP62820 205 aa11.09□□□□□ -0.63
CLCN3-210ENST00000515420 MRPS34P82930 218 aaKnown RBP11.09□□□□□ -0.63
CLCN3-210ENST00000515420 RUNX1T1Q06455 604 aa11.09□□□□□ -0.63
CLCN3-210ENST00000515420 NPRL3Q12980 569 aa11.09□□□□□ -0.63
CLCN3-210ENST00000515420 THEM4Q5T1C6 240 aa11.09□□□□□ -0.63
CLCN3-210ENST00000515420 BIVMQ86UB2 503 aa11.09□□□□□ -0.63
CLCN3-210ENST00000515420 OR4K5Q8NGD3 323 aa11.09□□□□□ -0.63
CLCN3-210ENST00000515420 OR13C2Q8NGS9 318 aa11.09□□□□□ -0.63
CLCN3-210ENST00000515420 OR51A7Q8NH64 312 aa11.09□□□□□ -0.63
CLCN3-210ENST00000515420 ZNF519Q8TB69 540 aa11.09□□□□□ -0.63
CLCN3-210ENST00000515420 HDAC2Q92769 488 aaKnown RBP11.09□□□□□ -0.63
CLCN3-210ENST00000515420 COX4I2Q96KJ9 171 aa11.09□□□□□ -0.63
CLCN3-210ENST00000515420 TNFRSF13CQ96RJ3 184 aa11.09□□□□□ -0.63
CLCN3-210ENST00000515420 GPX7Q96SL4 187 aaPredicted RBP11.09□□□□□ -0.63
CLCN3-210ENST00000515420 C1orf198Q9H425 327 aa11.09□□□□□ -0.63
CLCN3-210ENST00000515420 OCEL1Q9H607 264 aa11.09□□□□□ -0.63
CLCN3-210ENST00000515420 MTORP42345 2549 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms