RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 GMPPBQ9Y5P6 360 aa10.59□□□□□ -0.71
PDLIM5-220ENST00000514830 COL12A1Q99715 3063 aa10.59□□□□□ -0.71
PDLIM5-220ENST00000514830 M0R3G1 203 aa10.58□□□□□ -0.72
PDLIM5-220ENST00000514830 DVL2O14641 736 aa10.58□□□□□ -0.72
PDLIM5-220ENST00000514830 MSTNO14793 375 aa10.58□□□□□ -0.72
PDLIM5-220ENST00000514830 ARHGEF9O43307 516 aa10.58□□□□□ -0.72
PDLIM5-220ENST00000514830 MPZL2O60487 215 aa10.58□□□□□ -0.72
PDLIM5-220ENST00000514830 SERPINI2O75830 405 aa10.58□□□□□ -0.72
PDLIM5-220ENST00000514830 RENP00797 406 aa10.58□□□□□ -0.72
PDLIM5-220ENST00000514830 ZNF3P17036 446 aa10.58□□□□□ -0.72
PDLIM5-220ENST00000514830 CHRNB4P30926 498 aa10.58□□□□□ -0.72
PDLIM5-220ENST00000514830 CSNK1A1P48729 337 aa10.58□□□□□ -0.72
PDLIM5-220ENST00000514830 SNRPGP62308 76 aaKnown RBP10.58□□□□□ -0.72
PDLIM5-220ENST00000514830 ADORA2A-AS1P86434 159 aa10.58□□□□□ -0.72
PDLIM5-220ENST00000514830 TEKQ02763 1124 aa10.58□□□□□ -0.72
PDLIM5-220ENST00000514830 CAMK2DQ13557 499 aa10.58□□□□□ -0.72
PDLIM5-220ENST00000514830 NRN1LQ496H8 165 aa10.58□□□□□ -0.72
PDLIM5-220ENST00000514830 C1QTNF12Q5T7M4 302 aa10.58□□□□□ -0.72
PDLIM5-220ENST00000514830 ZNF691Q5VV52 312 aa10.58□□□□□ -0.72
PDLIM5-220ENST00000514830 FBXW9Q5XUX1 488 aa10.58□□□□□ -0.72
PDLIM5-220ENST00000514830 VWA1Q6PCB0 445 aa10.58□□□□□ -0.72
PDLIM5-220ENST00000514830 Q6ZT83 130 aa10.58□□□□□ -0.72
PDLIM5-220ENST00000514830 ZNF627Q7L945 461 aa10.58□□□□□ -0.72
PDLIM5-220ENST00000514830 ABHD12BQ7Z5M8 362 aaPredicted RBP10.58□□□□□ -0.72
PDLIM5-220ENST00000514830 MRGPRGQ86SM5 289 aa10.58□□□□□ -0.72
PDLIM5-220ENST00000514830 ZBTB46Q86UZ6 589 aa10.58□□□□□ -0.72
PDLIM5-220ENST00000514830 JAZF1Q86VZ6 243 aa10.58□□□□□ -0.72
PDLIM5-220ENST00000514830 CCDC71Q8IV32 467 aaPredicted RBP10.58□□□□□ -0.72
PDLIM5-220ENST00000514830 ZNF100Q8IYN0 542 aa10.58□□□□□ -0.72
PDLIM5-220ENST00000514830 SLC37A3Q8NCC5 494 aa10.58□□□□□ -0.72
PDLIM5-220ENST00000514830 SETD9Q8NE22 299 aa10.58□□□□□ -0.72
PDLIM5-220ENST00000514830 OR52E2Q8NGJ4 325 aa10.58□□□□□ -0.72
PDLIM5-220ENST00000514830 OR4K13Q8NH42 304 aa10.58□□□□□ -0.72
PDLIM5-220ENST00000514830 TMEM163Q8TC26 289 aa10.58□□□□□ -0.72
PDLIM5-220ENST00000514830 ASB5Q8WWX0 329 aa10.58□□□□□ -0.72
PDLIM5-220ENST00000514830 CCDC120Q96HB5 630 aa10.58□□□□□ -0.72
PDLIM5-220ENST00000514830 RBP7Q96R05 134 aa10.58□□□□□ -0.72
PDLIM5-220ENST00000514830 APOL4Q9BPW4 351 aa10.58□□□□□ -0.72
PDLIM5-220ENST00000514830 B3GAT2Q9NPZ5 323 aa10.58□□□□□ -0.72
PDLIM5-220ENST00000514830 SH3BGRL2Q9UJC5 107 aa10.58□□□□□ -0.72
PDLIM5-220ENST00000514830 PROCRQ9UNN8 238 aa10.58□□□□□ -0.72
PDLIM5-220ENST00000514830 RNF6Q9Y252 685 aa10.58□□□□□ -0.72
PDLIM5-220ENST00000514830 SLC5A6Q9Y289 635 aa10.58□□□□□ -0.72
PDLIM5-220ENST00000514830 FKBP7Q9Y680 259 aa10.58□□□□□ -0.72
PDLIM5-220ENST00000514830 DIDO1Q9BTC0 2240 aaKnown RBP10.58□□□□□ -0.72
PDLIM5-220ENST00000514830 MYO9AB2RTY4 2548 aa10.57□□□□□ -0.72
PDLIM5-220ENST00000514830 USP9YO00507 2555 aaPredicted RBP10.57□□□□□ -0.72
PDLIM5-220ENST00000514830 OR6C68A6NDL8 312 aa10.57□□□□□ -0.72
PDLIM5-220ENST00000514830 LRRTM2O43300 516 aa10.57□□□□□ -0.72
PDLIM5-220ENST00000514830 GABRB1P18505 474 aa10.57□□□□□ -0.72
PDLIM5-220ENST00000514830 PAICSP22234 425 aaKnown RBP10.57□□□□□ -0.72
PDLIM5-220ENST00000514830 CRABP1P29762 137 aa10.57□□□□□ -0.72
PDLIM5-220ENST00000514830 CENPAP49450 140 aa10.57□□□□□ -0.72
PDLIM5-220ENST00000514830 SH3BGRP55822 239 aaPredicted RBP10.57□□□□□ -0.72
PDLIM5-220ENST00000514830 CLRN1P58418 232 aa10.57□□□□□ -0.72
PDLIM5-220ENST00000514830 CRMP1Q14194 572 aa10.57□□□□□ -0.72
PDLIM5-220ENST00000514830 P2RY6Q15077 328 aa10.57□□□□□ -0.72
PDLIM5-220ENST00000514830 SNAPC1Q16533 368 aa10.57□□□□□ -0.72
PDLIM5-220ENST00000514830 OCLNQ16625 522 aa10.57□□□□□ -0.72
PDLIM5-220ENST00000514830 SLC25A35Q3KQZ1 300 aa10.57□□□□□ -0.72
PDLIM5-220ENST00000514830 FBXL19-AS1Q494R0 122 aa10.57□□□□□ -0.72
PDLIM5-220ENST00000514830 SLC35F1Q5T1Q4 408 aa10.57□□□□□ -0.72
PDLIM5-220ENST00000514830 TSPO2Q5TGU0 170 aa10.57□□□□□ -0.72
PDLIM5-220ENST00000514830 LEG1Q6P5S2 330 aa10.57□□□□□ -0.72
PDLIM5-220ENST00000514830 LRFN4Q6PJG9 635 aa10.57□□□□□ -0.72
PDLIM5-220ENST00000514830 SLC25A47Q6Q0C1 308 aa10.57□□□□□ -0.72
PDLIM5-220ENST00000514830 BEND4Q6ZU67 534 aa10.57□□□□□ -0.72
PDLIM5-220ENST00000514830 FOXL2NBQ6ZUU3 175 aa10.57□□□□□ -0.72
PDLIM5-220ENST00000514830 FJX1Q86VR8 437 aa10.57□□□□□ -0.72
PDLIM5-220ENST00000514830 GABRG1Q8N1C3 465 aa10.57□□□□□ -0.72
PDLIM5-220ENST00000514830 GPR137CQ8N3F9 429 aa10.57□□□□□ -0.72
PDLIM5-220ENST00000514830 CNEP1R1Q8N9A8 125 aa10.57□□□□□ -0.72
PDLIM5-220ENST00000514830 RHOXF1Q8NHV9 184 aa10.57□□□□□ -0.72
PDLIM5-220ENST00000514830 PRR7Q8TB68 274 aa10.57□□□□□ -0.72
PDLIM5-220ENST00000514830 FBLIM1Q8WUP2 373 aa10.57□□□□□ -0.72
PDLIM5-220ENST00000514830 CYGBQ8WWM9 190 aa10.57□□□□□ -0.72
PDLIM5-220ENST00000514830 PTP4A1Q93096 173 aa10.57□□□□□ -0.72
PDLIM5-220ENST00000514830 ZNF775Q96BV0 537 aaPredicted RBP10.57□□□□□ -0.72
PDLIM5-220ENST00000514830 PLEKHA8Q96JA3 519 aa10.57□□□□□ -0.72
PDLIM5-220ENST00000514830 NMNAT3Q96T66 252 aa10.57□□□□□ -0.72
PDLIM5-220ENST00000514830 ANKRD60Q9BZ19 345 aa10.57□□□□□ -0.72
PDLIM5-220ENST00000514830 RACGAP1Q9H0H5 632 aa10.57□□□□□ -0.72
PDLIM5-220ENST00000514830 SLC7A10Q9NS82 523 aa10.57□□□□□ -0.72
PDLIM5-220ENST00000514830 ASB6Q9NWX5 421 aa10.57□□□□□ -0.72
PDLIM5-220ENST00000514830 TVP23BQ9NYZ1 205 aa10.57□□□□□ -0.72
PDLIM5-220ENST00000514830 COQ3Q9NZJ6 369 aa10.57□□□□□ -0.72
PDLIM5-220ENST00000514830 ERRFI1Q9UJM3 462 aaPredicted RBP10.57□□□□□ -0.72
PDLIM5-220ENST00000514830 TEX15Q9BXT5 2789 aa10.56□□□□□ -0.72
PDLIM5-220ENST00000514830 IGLV1-36A0A0B4J1U3 117 aa10.56□□□□□ -0.72
PDLIM5-220ENST00000514830 A8MXE2 369 aa10.56□□□□□ -0.72
PDLIM5-220ENST00000514830 PRR23D1E9PI22 279 aaPredicted RBP10.56□□□□□ -0.72
PDLIM5-220ENST00000514830 PRODHO43272 600 aa10.56□□□□□ -0.72
PDLIM5-220ENST00000514830 PRKYO43930 277 aa10.56□□□□□ -0.72
PDLIM5-220ENST00000514830 UPK3AO75631 287 aa10.56□□□□□ -0.72
PDLIM5-220ENST00000514830 SLC2A10O95528 541 aa10.56□□□□□ -0.72
PDLIM5-220ENST00000514830 PRR23D2P0DMB1 279 aaPredicted RBP10.56□□□□□ -0.72
PDLIM5-220ENST00000514830 COX5AP20674 150 aa10.56□□□□□ -0.72
PDLIM5-220ENST00000514830 SLC2A5P22732 501 aa10.56□□□□□ -0.72
PDLIM5-220ENST00000514830 EDNRAP25101 427 aa10.56□□□□□ -0.72
PDLIM5-220ENST00000514830 BLVRAP53004 296 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 130.7 ms