RNA–Protein interactions for RNA: ENST00000514313.1

NUP54-215, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 537 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-215ENST00000514313 CCNB1IP1Q9NPC3 277 aa5.19□□□□□ -1.58
NUP54-215ENST00000514313 MRPL22Q9NWU5 206 aaKnown RBP5.19□□□□□ -1.58
NUP54-215ENST00000514313 USP27XA6NNY8 438 aa5.18□□□□□ -1.58
NUP54-215ENST00000514313 F6UB75 175 aa5.18□□□□□ -1.58
NUP54-215ENST00000514313 NDUFAB1O14561 156 aa5.18□□□□□ -1.58
NUP54-215ENST00000514313 EMC8O43402 210 aa5.18□□□□□ -1.58
NUP54-215ENST00000514313 FAM189A1O60320 539 aa5.18□□□□□ -1.58
NUP54-215ENST00000514313 HUS1O60921 280 aa5.18□□□□□ -1.58
NUP54-215ENST00000514313 GKN3PP0CG01 181 aa5.18□□□□□ -1.58
NUP54-215ENST00000514313 MYL2P10916 166 aa5.18□□□□□ -1.58
NUP54-215ENST00000514313 GSTM3P21266 225 aa5.18□□□□□ -1.58
NUP54-215ENST00000514313 HTR1EP28566 365 aa5.18□□□□□ -1.58
NUP54-215ENST00000514313 OR1G1P47890 313 aa5.18□□□□□ -1.58
NUP54-215ENST00000514313 CX3CR1P49238 355 aa5.18□□□□□ -1.58
NUP54-215ENST00000514313 CRISP1P54107 249 aa5.18□□□□□ -1.58
NUP54-215ENST00000514313 CLDN8P56748 225 aa5.18□□□□□ -1.58
NUP54-215ENST00000514313 ECH1Q13011 328 aa5.18□□□□□ -1.58
NUP54-215ENST00000514313 ORC2Q13416 577 aaPredicted RBP5.18□□□□□ -1.58
NUP54-215ENST00000514313 FZD2Q14332 565 aa5.18□□□□□ -1.58
NUP54-215ENST00000514313 HSDL1Q3SXM5 330 aa5.18□□□□□ -1.58
NUP54-215ENST00000514313 RNF212Q495C1 297 aa5.18□□□□□ -1.58
NUP54-215ENST00000514313 AGBL2Q5U5Z8 902 aa5.18□□□□□ -1.58
NUP54-215ENST00000514313 LINC01006Q8NI28 216 aa5.18□□□□□ -1.58
NUP54-215ENST00000514313 MARCH1Q8TCQ1 289 aa5.18□□□□□ -1.58
NUP54-215ENST00000514313 NDRG1Q92597 394 aaKnown RBP5.18□□□□□ -1.58
NUP54-215ENST00000514313 ISG20Q96AZ6 181 aaKnown RBP5.18□□□□□ -1.58
NUP54-215ENST00000514313 RASL11BQ9BPW5 248 aa5.18□□□□□ -1.58
NUP54-215ENST00000514313 BCL7BQ9BQE9 202 aa5.18□□□□□ -1.58
NUP54-215ENST00000514313 TMEM165Q9HC07 324 aa5.18□□□□□ -1.58
NUP54-215ENST00000514313 LYRM4Q9HD34 91 aa5.18□□□□□ -1.58
NUP54-215ENST00000514313 IL17CQ9P0M4 197 aa5.18□□□□□ -1.58
NUP54-215ENST00000514313 UXTQ9UBK9 157 aaPredicted RBP5.18□□□□□ -1.58
NUP54-215ENST00000514313 HAT1O14929 419 aa5.17□□□□□ -1.58
NUP54-215ENST00000514313 MOSP00540 346 aa5.17□□□□□ -1.58
NUP54-215ENST00000514313 IGKV3-15P01624 115 aa5.17□□□□□ -1.58
NUP54-215ENST00000514313 SERPINA5P05154 406 aa5.17□□□□□ -1.58
NUP54-215ENST00000514313 GIPP09681 153 aaPredicted RBP5.17□□□□□ -1.58
NUP54-215ENST00000514313 HMOX2P30519 316 aa5.17□□□□□ -1.58
NUP54-215ENST00000514313 FGF8P55075 233 aaPredicted RBP5.17□□□□□ -1.58
NUP54-215ENST00000514313 HADHQ16836 314 aaKnown RBP5.17□□□□□ -1.58
NUP54-215ENST00000514313 LRRC10Q5BKY1 277 aa5.17□□□□□ -1.58
NUP54-215ENST00000514313 TTC19Q6DKK2 380 aaPredicted RBP5.17□□□□□ -1.58
NUP54-215ENST00000514313 CMTM1Q8IZ96 169 aa5.17□□□□□ -1.58
NUP54-215ENST00000514313 ZNF321PQ8N8H1 164 aa5.17□□□□□ -1.58
NUP54-215ENST00000514313 EML4Q9HC35 981 aaKnown RBP5.17□□□□□ -1.58
NUP54-215ENST00000514313 GNPTGQ9UJJ9 305 aa5.17□□□□□ -1.58
NUP54-215ENST00000514313 GLYATL1P3A0A0U1RQE8 302 aa5.16□□□□□ -1.58
NUP54-215ENST00000514313 A0A1B0GVI7 797 aa5.16□□□□□ -1.58
NUP54-215ENST00000514313 EIF4E2O60573 245 aaKnown RBP5.16□□□□□ -1.58
NUP54-215ENST00000514313 HPNP05981 417 aa5.16□□□□□ -1.58
NUP54-215ENST00000514313 CSF3P09919 207 aa5.16□□□□□ -1.58
NUP54-215ENST00000514313 ACSM4P0C7M7 580 aa5.16□□□□□ -1.58
NUP54-215ENST00000514313 POLR2MP0CAP2 368 aa5.16□□□□□ -1.58
NUP54-215ENST00000514313 TUBG1P23258 451 aa5.16□□□□□ -1.58
NUP54-215ENST00000514313 PEX19P40855 299 aa5.16□□□□□ -1.58
NUP54-215ENST00000514313 CDKN1BP46527 198 aa5.16□□□□□ -1.58
NUP54-215ENST00000514313 MRPL19P49406 292 aaKnown RBP5.16□□□□□ -1.58
NUP54-215ENST00000514313 ADARB1P78563 741 aaKnown RBP5.16□□□□□ -1.58
NUP54-215ENST00000514313 MAB21L1Q13394 359 aa5.16□□□□□ -1.58
NUP54-215ENST00000514313 CAVIN4Q5BKX8 364 aa5.16□□□□□ -1.58
NUP54-215ENST00000514313 C6orf89Q6UWU4 347 aa5.16□□□□□ -1.58
NUP54-215ENST00000514313 TMEM135Q86UB9 458 aa5.16□□□□□ -1.58
NUP54-215ENST00000514313 OR2L5Q8NG80 312 aa5.16□□□□□ -1.58
NUP54-215ENST00000514313 OR1N2Q8NGR9 330 aa5.16□□□□□ -1.58
NUP54-215ENST00000514313 GLYATL2Q8WU03 294 aa5.16□□□□□ -1.58
NUP54-215ENST00000514313 OR5B12Q96R08 314 aa5.16□□□□□ -1.58
NUP54-215ENST00000514313 NRIP2Q9BQI9 281 aa5.16□□□□□ -1.58
NUP54-215ENST00000514313 TUBG2Q9NRH3 451 aa5.16□□□□□ -1.58
NUP54-215ENST00000514313 SAMSN1Q9NSI8 373 aaKnown RBP5.16□□□□□ -1.58
NUP54-215ENST00000514313 HRASLS2Q9NWW9 162 aa5.16□□□□□ -1.58
NUP54-215ENST00000514313 A0A0G2JN53 185 aa5.15□□□□□ -1.59
NUP54-215ENST00000514313 ZNF816-ZNF321PA0A0X1KG74 233 aa5.15□□□□□ -1.59
NUP54-215ENST00000514313 KBTBD11-OT1A0A1B0GTJ5 212 aa5.15□□□□□ -1.59
NUP54-215ENST00000514313 TRAF3IP2O43734 574 aaPredicted RBP5.15□□□□□ -1.59
NUP54-215ENST00000514313 KLF8O95600 359 aaPredicted RBP5.15□□□□□ -1.59
NUP54-215ENST00000514313 CD1EP15812 388 aa5.15□□□□□ -1.59
NUP54-215ENST00000514313 EIF3EP60228 445 aaKnown RBP5.15□□□□□ -1.59
NUP54-215ENST00000514313 AQP6Q13520 282 aa5.15□□□□□ -1.59
NUP54-215ENST00000514313 DOC2AQ14183 400 aa5.15□□□□□ -1.59
NUP54-215ENST00000514313 IL17AQ16552 155 aa5.15□□□□□ -1.59
NUP54-215ENST00000514313 HIKESHIQ53FT3 197 aa5.15□□□□□ -1.59
NUP54-215ENST00000514313 OTPQ5XKR4 325 aa5.15□□□□□ -1.59
NUP54-215ENST00000514313 ACP7Q6ZNF0 438 aa5.15□□□□□ -1.59
NUP54-215ENST00000514313 OR4F15Q8NGB8 312 aa5.15□□□□□ -1.59
NUP54-215ENST00000514313 OR10R2Q8NGX6 335 aa5.15□□□□□ -1.59
NUP54-215ENST00000514313 ACER1Q8TDN7 264 aa5.15□□□□□ -1.59
NUP54-215ENST00000514313 XPO6Q96QU8 1125 aaKnown RBP5.15□□□□□ -1.59
NUP54-215ENST00000514313 ANKRD60Q9BZ19 345 aa5.15□□□□□ -1.59
NUP54-215ENST00000514313 RETNQ9HD89 108 aa5.15□□□□□ -1.59
NUP54-215ENST00000514313 CLN8Q9UBY8 286 aa5.15□□□□□ -1.59
NUP54-215ENST00000514313 SLC17A4Q9Y2C5 497 aa5.15□□□□□ -1.59
NUP54-215ENST00000514313 GOLT1BQ9Y3E0 138 aa5.15□□□□□ -1.59
NUP54-215ENST00000514313 CHTOPQ9Y3Y2 248 aaKnown RBP5.15□□□□□ -1.59
NUP54-215ENST00000514313 KIF25-AS1Q9Y6Z4 181 aa5.15□□□□□ -1.59
NUP54-215ENST00000514313 SYNRGQ9UMZ2 1314 aa5.15□□□□□ -1.59
NUP54-215ENST00000514313 SERPINB5P36952 375 aa5.14□□□□□ -1.59
NUP54-215ENST00000514313 CCR8P51685 355 aa5.14□□□□□ -1.59
NUP54-215ENST00000514313 NUP107P57740 925 aa5.14□□□□□ -1.59
NUP54-215ENST00000514313 GNB2P62879 340 aa5.14□□□□□ -1.59
NUP54-215ENST00000514313 NDPQ00604 133 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms