RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 SHBGP04278 402 aa8.23□□□□□ -1.09
VCAN-208ENST00000512590 HOXB5P09067 269 aa8.23□□□□□ -1.09
VCAN-208ENST00000512590 HOXC8P31273 242 aa8.23□□□□□ -1.09
VCAN-208ENST00000512590 SRPXP78539 464 aa8.23□□□□□ -1.09
VCAN-208ENST00000512590 ZNF750Q32MQ0 723 aa8.23□□□□□ -1.09
VCAN-208ENST00000512590 PHC2Q8IXK0 858 aa8.23□□□□□ -1.09
VCAN-208ENST00000512590 ACOT4Q8N9L9 421 aa8.23□□□□□ -1.09
VCAN-208ENST00000512590 OR2I1PQ8NGU4 316 aa8.23□□□□□ -1.09
VCAN-208ENST00000512590 BTF3L4Q96K17 158 aa8.23□□□□□ -1.09
VCAN-208ENST00000512590 CNTNAP3BQ96NU0 1288 aa8.23□□□□□ -1.09
VCAN-208ENST00000512590 PRRT1Q99946 306 aa8.23□□□□□ -1.09
VCAN-208ENST00000512590 S1PR5Q9H228 398 aa8.23□□□□□ -1.09
VCAN-208ENST00000512590 DCSTAMPQ9H295 470 aa8.23□□□□□ -1.09
VCAN-208ENST00000512590 EXO1Q9UQ84 846 aaKnown RBP8.23□□□□□ -1.09
VCAN-208ENST00000512590 PPP1R3CQ9UQK1 317 aa8.23□□□□□ -1.09
VCAN-208ENST00000512590 CDC42BPAQ5VT25 1732 aa8.23□□□□□ -1.09
VCAN-208ENST00000512590 LOC102723971A0A1B0GUV8 181 aa8.23□□□□□ -1.09
VCAN-208ENST00000512590 LINC01553A4QN01 128 aa8.23□□□□□ -1.09
VCAN-208ENST00000512590 MEIS3P1A6NDR6 274 aa8.23□□□□□ -1.09
VCAN-208ENST00000512590 JRKO75564 520 aa8.23□□□□□ -1.09
VCAN-208ENST00000512590 ADPRHP54922 357 aa8.23□□□□□ -1.09
VCAN-208ENST00000512590 PARS2Q7L3T8 475 aaKnown RBP8.23□□□□□ -1.09
VCAN-208ENST00000512590 ADGRG5Q8IZF4 528 aa8.23□□□□□ -1.09
VCAN-208ENST00000512590 OR1S2Q8NGQ3 325 aa8.23□□□□□ -1.09
VCAN-208ENST00000512590 C5AR2Q9P296 337 aa8.23□□□□□ -1.09
VCAN-208ENST00000512590 MMP17Q9ULZ9 603 aa8.23□□□□□ -1.09
VCAN-208ENST00000512590 TSPAN11A1L157 253 aa8.22□□□□□ -1.09
VCAN-208ENST00000512590 CPMP14384 443 aa8.22□□□□□ -1.09
VCAN-208ENST00000512590 PROZP22891 400 aa8.22□□□□□ -1.09
VCAN-208ENST00000512590 MYF6P23409 242 aa8.22□□□□□ -1.09
VCAN-208ENST00000512590 GLYR1Q49A26 553 aaPredicted RBP8.22□□□□□ -1.09
VCAN-208ENST00000512590 COQ5Q5HYK3 327 aa8.22□□□□□ -1.09
VCAN-208ENST00000512590 BLOC1S3Q6QNY0 202 aa8.22□□□□□ -1.09
VCAN-208ENST00000512590 PIGTQ969N2 578 aa8.22□□□□□ -1.09
VCAN-208ENST00000512590 CYSLTR2Q9NS75 346 aa8.22□□□□□ -1.09
VCAN-208ENST00000512590 CLCF1Q9UBD9 225 aa8.22□□□□□ -1.09
VCAN-208ENST00000512590 FOXO6A8MYZ6 492 aa8.22□□□□□ -1.09
VCAN-208ENST00000512590 C2CD4DB7Z1M9 353 aa8.22□□□□□ -1.09
VCAN-208ENST00000512590 SLC22A1O15245 554 aa8.22□□□□□ -1.09
VCAN-208ENST00000512590 TOX4O94842 621 aa8.22□□□□□ -1.09
VCAN-208ENST00000512590 GPR75O95800 540 aa8.22□□□□□ -1.09
VCAN-208ENST00000512590 ANKRD34CP0C6C1 535 aa8.22□□□□□ -1.09
VCAN-208ENST00000512590 RNF224P0DH78 156 aa8.22□□□□□ -1.09
VCAN-208ENST00000512590 GABRA1P14867 456 aa8.22□□□□□ -1.09
VCAN-208ENST00000512590 RAB5AP20339 215 aa8.22□□□□□ -1.09
VCAN-208ENST00000512590 HNRNPFP52597 415 aaKnown RBP8.22□□□□□ -1.09
VCAN-208ENST00000512590 ATP5J2P56134 94 aa8.22□□□□□ -1.09
VCAN-208ENST00000512590 CACNG7P62955 275 aa8.22□□□□□ -1.09
VCAN-208ENST00000512590 CCL7P80098 99 aa8.22□□□□□ -1.09
VCAN-208ENST00000512590 TNFAIP6P98066 277 aaPredicted RBP8.22□□□□□ -1.09
VCAN-208ENST00000512590 OR2B11Q5JQS5 317 aa8.22□□□□□ -1.09
VCAN-208ENST00000512590 SFRP4Q6FHJ7 346 aaPredicted RBP8.22□□□□□ -1.09
VCAN-208ENST00000512590 ADAM5Q6NVV9 412 aa8.22□□□□□ -1.09
VCAN-208ENST00000512590 OR2W3Q7Z3T1 314 aa8.22□□□□□ -1.09
VCAN-208ENST00000512590 SLC25A43Q8WUT9 341 aaPredicted RBP8.22□□□□□ -1.09
VCAN-208ENST00000512590 TMEM19Q96HH6 336 aa8.22□□□□□ -1.09
VCAN-208ENST00000512590 KREMEN1Q96MU8 473 aa8.22□□□□□ -1.09
VCAN-208ENST00000512590 TNFRSF13CQ96RJ3 184 aa8.22□□□□□ -1.09
VCAN-208ENST00000512590 RAB6CQ9H0N0 254 aa8.22□□□□□ -1.09
VCAN-208ENST00000512590 PRSS50Q9UI38 385 aa8.22□□□□□ -1.09
VCAN-208ENST00000512590 LRRC42Q9Y546 428 aa8.22□□□□□ -1.09
VCAN-208ENST00000512590 TMEM262E9PQX1 116 aa8.22□□□□□ -1.09
VCAN-208ENST00000512590 I3L521 148 aa8.22□□□□□ -1.09
VCAN-208ENST00000512590 ACKR3P25106 362 aa8.22□□□□□ -1.09
VCAN-208ENST00000512590 EPHA8P29322 1005 aaPredicted RBP8.22□□□□□ -1.09
VCAN-208ENST00000512590 RAB5CP51148 216 aa8.22□□□□□ -1.09
VCAN-208ENST00000512590 TPMTP51580 245 aa8.22□□□□□ -1.09
VCAN-208ENST00000512590 MVKQ03426 396 aa8.22□□□□□ -1.09
VCAN-208ENST00000512590 ZNF816Q0VGE8 651 aaPredicted RBP8.22□□□□□ -1.09
VCAN-208ENST00000512590 GTDC1Q4AE62 458 aa8.22□□□□□ -1.09
VCAN-208ENST00000512590 EBLN2Q6P2I7 272 aa8.22□□□□□ -1.09
VCAN-208ENST00000512590 SYT9Q86SS6 491 aa8.22□□□□□ -1.09
VCAN-208ENST00000512590 OR5D18Q8NGL1 313 aa8.22□□□□□ -1.09
VCAN-208ENST00000512590 SGK494Q96LW2 274 aa8.22□□□□□ -1.09
VCAN-208ENST00000512590 SLC46A1Q96NT5 459 aa8.22□□□□□ -1.09
VCAN-208ENST00000512590 C20orf85Q9H1P6 137 aa8.22□□□□□ -1.09
VCAN-208ENST00000512590 GLTPQ9NZD2 209 aa8.22□□□□□ -1.09
VCAN-208ENST00000512590 OSGIN1Q9UJX0 560 aa8.22□□□□□ -1.09
VCAN-208ENST00000512590 CES1P1Q9UKY3 287 aa8.22□□□□□ -1.09
VCAN-208ENST00000512590 PCOLCE2Q9UKZ9 415 aa8.22□□□□□ -1.09
VCAN-208ENST00000512590 HRH3Q9Y5N1 445 aa8.22□□□□□ -1.09
VCAN-208ENST00000512590 AGPAT2O15120 278 aa8.22□□□□□ -1.09
VCAN-208ENST00000512590 CSF1P09603 554 aa8.22□□□□□ -1.09
VCAN-208ENST00000512590 CSF3P09919 207 aa8.22□□□□□ -1.09
VCAN-208ENST00000512590 AKAIN1P0CW23 69 aa8.22□□□□□ -1.09
VCAN-208ENST00000512590 ABCD3P28288 659 aa8.22□□□□□ -1.09
VCAN-208ENST00000512590 GPR6P46095 362 aaPredicted RBP8.22□□□□□ -1.09
VCAN-208ENST00000512590 SLC18A1P54219 525 aa8.22□□□□□ -1.09
VCAN-208ENST00000512590 PM20D1Q6GTS8 502 aa8.22□□□□□ -1.09
VCAN-208ENST00000512590 LAMTOR1Q6IAA8 161 aa8.22□□□□□ -1.09
VCAN-208ENST00000512590 ZNF517Q6ZMY9 492 aaPredicted RBP8.22□□□□□ -1.09
VCAN-208ENST00000512590 SCML4Q8N228 414 aa8.22□□□□□ -1.09
VCAN-208ENST00000512590 DTD1Q8TEA8 209 aa8.22□□□□□ -1.09
VCAN-208ENST00000512590 IGSF8Q969P0 613 aa8.22□□□□□ -1.09
VCAN-208ENST00000512590 DTD2Q96FN9 168 aa8.22□□□□□ -1.09
VCAN-208ENST00000512590 RHOFQ9HBH0 211 aa8.22□□□□□ -1.09
VCAN-208ENST00000512590 RPS10P5Q9NQ39 176 aa8.22□□□□□ -1.09
VCAN-208ENST00000512590 ZMAT5Q9UDW3 170 aaKnown RBP8.22□□□□□ -1.09
VCAN-208ENST00000512590 DIP2AQ14689 1571 aa8.22□□□□□ -1.09
VCAN-208ENST00000512590 ARPC4-TTLL3A0A0A6YYG9 625 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms