RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 CPNE4Q96A23 557 aaPredicted RBP7.75□□□□□ -1.17
HTT-208ENST00000510626 SEH1LQ96EE3 360 aa7.75□□□□□ -1.17
HTT-208ENST00000510626 LRRC3BQ96PB8 259 aa7.75□□□□□ -1.17
HTT-208ENST00000510626 SLC25A19Q9HC21 320 aa7.75□□□□□ -1.17
HTT-208ENST00000510626 PPT2Q9UMR5 302 aa7.75□□□□□ -1.17
HTT-208ENST00000510626 CACNA1EQ15878 2313 aa7.75□□□□□ -1.17
HTT-208ENST00000510626 EPHA1P21709 976 aa7.75□□□□□ -1.17
HTT-208ENST00000510626 CSNK1A1P48729 337 aa7.75□□□□□ -1.17
HTT-208ENST00000510626 CTDSP1Q9GZU7 261 aa7.75□□□□□ -1.17
HTT-208ENST00000510626 SERTAD4Q9NUC0 356 aa7.75□□□□□ -1.17
HTT-208ENST00000510626 SNX11Q9Y5W9 270 aa7.75□□□□□ -1.17
HTT-208ENST00000510626 SELEP16581 610 aa7.75□□□□□ -1.17
HTT-208ENST00000510626 NSDHLQ15738 373 aa7.75□□□□□ -1.17
HTT-208ENST00000510626 TFAP2EQ6VUC0 442 aa7.75□□□□□ -1.17
HTT-208ENST00000510626 FIZ1Q96SL8 496 aa7.75□□□□□ -1.17
HTT-208ENST00000510626 PIGQQ9BRB3 760 aa7.75□□□□□ -1.17
HTT-208ENST00000510626 TIMM29Q9BSF4 260 aa7.75□□□□□ -1.17
HTT-208ENST00000510626 GALNT9Q9HCQ5 603 aa7.75□□□□□ -1.17
HTT-208ENST00000510626 ZNF391Q9UJN7 358 aa7.75□□□□□ -1.17
HTT-208ENST00000510626 ACTL7AQ9Y615 435 aa7.75□□□□□ -1.17
HTT-208ENST00000510626 GLCEO94923 617 aa7.75□□□□□ -1.17
HTT-208ENST00000510626 CTSLP07711 333 aa7.75□□□□□ -1.17
HTT-208ENST00000510626 LIPAP38571 399 aa7.75□□□□□ -1.17
HTT-208ENST00000510626 CISD2Q8N5K1 135 aaKnown RBP7.75□□□□□ -1.17
HTT-208ENST00000510626 A8MUA0 341 aa7.75□□□□□ -1.17
HTT-208ENST00000510626 RTCAO00442 366 aaKnown RBP7.75□□□□□ -1.17
HTT-208ENST00000510626 ZNF888P0CJ79 500 aaPredicted RBP7.75□□□□□ -1.17
HTT-208ENST00000510626 NME2P22392 152 aa7.75□□□□□ -1.17
HTT-208ENST00000510626 ANAPC16Q96DE5 110 aa7.75□□□□□ -1.17
HTT-208ENST00000510626 PLCE1Q9P212 2302 aa7.75□□□□□ -1.17
HTT-208ENST00000510626 ATG2BQ96BY7 2078 aa7.75□□□□□ -1.17
HTT-208ENST00000510626 FOXK2Q01167 660 aa7.75□□□□□ -1.17
HTT-208ENST00000510626 FAM69BQ5VUD6 431 aa7.75□□□□□ -1.17
HTT-208ENST00000510626 Q6ZTK2 550 aa7.75□□□□□ -1.17
HTT-208ENST00000510626 SDR9C7Q8NEX9 313 aa7.75□□□□□ -1.17
HTT-208ENST00000510626 TMEM265A0A087WTH1 108 aa7.75□□□□□ -1.17
HTT-208ENST00000510626 EVX2Q03828 476 aa7.75□□□□□ -1.17
HTT-208ENST00000510626 ZNF628Q5EBL2 1059 aa7.75□□□□□ -1.17
HTT-208ENST00000510626 AADACL3Q5VUY0 350 aa7.75□□□□□ -1.17
HTT-208ENST00000510626 CATSPERDQ86XM0 798 aa7.75□□□□□ -1.17
HTT-208ENST00000510626 CLECL1Q8IZS7 167 aa7.75□□□□□ -1.17
HTT-208ENST00000510626 ABHD6Q9BV23 337 aa7.75□□□□□ -1.17
HTT-208ENST00000510626 A0A1W2PRU2 124 aa7.74□□□□□ -1.17
HTT-208ENST00000510626 MCRIP1C9JLW8 97 aa7.74□□□□□ -1.17
HTT-208ENST00000510626 KCNAB3O43448 404 aa7.74□□□□□ -1.17
HTT-208ENST00000510626 PDGFBP01127 241 aaPredicted RBP7.74□□□□□ -1.17
HTT-208ENST00000510626 CD14P08571 375 aa7.74□□□□□ -1.17
HTT-208ENST00000510626 FABP6P51161 128 aa7.74□□□□□ -1.17
HTT-208ENST00000510626 MTCP1P56278 107 aa7.74□□□□□ -1.17
HTT-208ENST00000510626 DHODHQ02127 395 aa7.74□□□□□ -1.17
HTT-208ENST00000510626 PSAPL1Q6NUJ1 521 aa7.74□□□□□ -1.17
HTT-208ENST00000510626 WDR73Q6P4I2 378 aa7.74□□□□□ -1.17
HTT-208ENST00000510626 MRPL52Q86TS9 123 aaKnown RBP7.74□□□□□ -1.17
HTT-208ENST00000510626 SFT2D1Q8WV19 159 aa7.74□□□□□ -1.17
HTT-208ENST00000510626 OR1F2PQ96R84 312 aa7.74□□□□□ -1.17
HTT-208ENST00000510626 ESRP2Q9H6T0 727 aaKnown RBP7.74□□□□□ -1.17
HTT-208ENST00000510626 TMEM184BQ9Y519 407 aaPredicted RBP7.74□□□□□ -1.17
HTT-208ENST00000510626 COL14A1Q05707 1796 aaKnown RBP7.74□□□□□ -1.17
HTT-208ENST00000510626 STC2O76061 302 aa7.74□□□□□ -1.17
HTT-208ENST00000510626 TMEM106AQ96A25 262 aa7.74□□□□□ -1.17
HTT-208ENST00000510626 TXNDC17Q9BRA2 123 aa7.74□□□□□ -1.17
HTT-208ENST00000510626 LYRM4Q9HD34 91 aa7.74□□□□□ -1.17
HTT-208ENST00000510626 PADI1Q9ULC6 663 aa7.74□□□□□ -1.17
HTT-208ENST00000510626 KCNK6Q9Y257 313 aa7.74□□□□□ -1.17
HTT-208ENST00000510626 HNRNPKP61978 463 aaKnown RBP eCLIP7.74□□□□□ -1.17
HTT-208ENST00000510626 TPBGQ13641 420 aa7.74□□□□□ -1.17
HTT-208ENST00000510626 C1QTNF12Q5T7M4 302 aa7.74□□□□□ -1.17
HTT-208ENST00000510626 MAMDC4Q6UXC1 1216 aa7.74□□□□□ -1.17
HTT-208ENST00000510626 CCDC190Q86UF4 302 aa7.74□□□□□ -1.17
HTT-208ENST00000510626 ACTR3CQ9C0K3 210 aaPredicted RBP7.74□□□□□ -1.17
HTT-208ENST00000510626 LAMB2P55268 1798 aa7.74□□□□□ -1.17
HTT-208ENST00000510626 RFPL4AA6NLU0 287 aa7.74□□□□□ -1.17
HTT-208ENST00000510626 RFPL4AL1F8VTS6 287 aa7.74□□□□□ -1.17
HTT-208ENST00000510626 HABP2Q14520 560 aaPredicted RBP7.74□□□□□ -1.17
HTT-208ENST00000510626 CLINT1Q14677 625 aa7.74□□□□□ -1.17
HTT-208ENST00000510626 VAMP3Q15836 100 aa7.74□□□□□ -1.17
HTT-208ENST00000510626 MAVSQ7Z434 540 aa7.74□□□□□ -1.17
HTT-208ENST00000510626 FYTTD1Q96QD9 318 aaKnown RBP7.74□□□□□ -1.17
HTT-208ENST00000510626 C1orf198Q9H425 327 aa7.74□□□□□ -1.17
HTT-208ENST00000510626 SERPINE3A8MV23 424 aa7.74□□□□□ -1.17
HTT-208ENST00000510626 ST8SIA3O43173 380 aa7.74□□□□□ -1.17
HTT-208ENST00000510626 ICAM2P13598 275 aa7.74□□□□□ -1.17
HTT-208ENST00000510626 UBE2NP61088 152 aaKnown RBP7.74□□□□□ -1.17
HTT-208ENST00000510626 SLC35A1P78382 337 aa7.74□□□□□ -1.17
HTT-208ENST00000510626 PLA1AQ53H76 456 aa7.74□□□□□ -1.17
HTT-208ENST00000510626 PIP5KL1Q5T9C9 394 aa7.74□□□□□ -1.17
HTT-208ENST00000510626 CNKSR3Q6P9H4 555 aa7.74□□□□□ -1.17
HTT-208ENST00000510626 ARHGAP9Q9BRR9 750 aa7.74□□□□□ -1.17
HTT-208ENST00000510626 SOX7Q9BT81 388 aa7.74□□□□□ -1.17
HTT-208ENST00000510626 SGPP1Q9BX95 441 aa7.74□□□□□ -1.17
HTT-208ENST00000510626 OR52A1Q9UKL2 312 aa7.74□□□□□ -1.17
HTT-208ENST00000510626 MCTS1Q9ULC4 181 aaKnown RBP7.74□□□□□ -1.17
HTT-208ENST00000510626 A0A1B0GV50 99 aa7.74□□□□□ -1.17
HTT-208ENST00000510626 MEIS3P1A6NDR6 274 aa7.74□□□□□ -1.17
HTT-208ENST00000510626 TYRP1P17643 537 aa7.74□□□□□ -1.17
HTT-208ENST00000510626 IL10RAQ13651 578 aa7.74□□□□□ -1.17
HTT-208ENST00000510626 SURF2Q15527 256 aaPredicted RBP7.74□□□□□ -1.17
HTT-208ENST00000510626 ZNF595Q8IYB9 648 aa7.74□□□□□ -1.17
HTT-208ENST00000510626 TVP23CQ96ET8 276 aa7.74□□□□□ -1.17
HTT-208ENST00000510626 SPHK2Q9NRA0 654 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms