RNA–Protein interactions for RNA: ENST00000509576.5

DDX41-210, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-210ENST00000509576 ARMC7Q9H6L4 198 aa11.38□□□□□ -0.59
DDX41-210ENST00000509576 ZNF665Q9H7R5 613 aa11.38□□□□□ -0.59
DDX41-210ENST00000509576 SLCO1B3Q9NPD5 702 aa11.38□□□□□ -0.59
DDX41-210ENST00000509576 TCF7L2Q9NQB0 619 aa11.38□□□□□ -0.59
DDX41-210ENST00000509576 GLTPQ9NZD2 209 aa11.38□□□□□ -0.59
DDX41-210ENST00000509576 SLC7A8Q9UHI5 535 aa11.38□□□□□ -0.59
DDX41-210ENST00000509576 USH1CQ9Y6N9 552 aa11.38□□□□□ -0.59
DDX41-210ENST00000509576 A0A1W2PPW3 197 aa11.37□□□□□ -0.59
DDX41-210ENST00000509576 VSTM5A8MXK1 200 aa11.37□□□□□ -0.59
DDX41-210ENST00000509576 C5orf58C9J3I9 102 aa11.37□□□□□ -0.59
DDX41-210ENST00000509576 UBL3O95164 117 aa11.37□□□□□ -0.59
DDX41-210ENST00000509576 RAB36O95755 333 aa11.37□□□□□ -0.59
DDX41-210ENST00000509576 IGHV2-5P01817 119 aa11.37□□□□□ -0.59
DDX41-210ENST00000509576 AHCYP23526 432 aa11.37□□□□□ -0.59
DDX41-210ENST00000509576 WNT5AP41221 380 aa11.37□□□□□ -0.59
DDX41-210ENST00000509576 MYBPC1Q00872 1141 aa11.37□□□□□ -0.59
DDX41-210ENST00000509576 GLO1Q04760 184 aa11.37□□□□□ -0.59
DDX41-210ENST00000509576 HIST3H3Q16695 136 aa11.37□□□□□ -0.59
DDX41-210ENST00000509576 GKAP1Q5VSY0 366 aaPredicted RBP11.37□□□□□ -0.59
DDX41-210ENST00000509576 SLC35D2Q76EJ3 337 aa11.37□□□□□ -0.59
DDX41-210ENST00000509576 PIWIL3Q7Z3Z3 882 aaKnown RBP11.37□□□□□ -0.59
DDX41-210ENST00000509576 ZNF101Q8IZC7 436 aa11.37□□□□□ -0.59
DDX41-210ENST00000509576 CPEB3Q8NE35 698 aaKnown RBP11.37□□□□□ -0.59
DDX41-210ENST00000509576 SLC30A7Q8NEW0 376 aa11.37□□□□□ -0.59
DDX41-210ENST00000509576 OR4K5Q8NGD3 323 aa11.37□□□□□ -0.59
DDX41-210ENST00000509576 RNF217Q8TC41 542 aa11.37□□□□□ -0.59
DDX41-210ENST00000509576 TAF15Q92804 592 aaKnown RBP eCLIP11.37□□□□□ -0.59
DDX41-210ENST00000509576 SPDL1Q96EA4 605 aa11.37□□□□□ -0.59
DDX41-210ENST00000509576 C1orf147Q96MC9 270 aaPredicted RBP11.37□□□□□ -0.59
DDX41-210ENST00000509576 ZNF347Q96SE7 839 aa11.37□□□□□ -0.59
DDX41-210ENST00000509576 MEPEQ9NQ76 525 aaPredicted RBP11.37□□□□□ -0.59
DDX41-210ENST00000509576 CCDC167Q9P0B6 97 aa11.37□□□□□ -0.59
DDX41-210ENST00000509576 PCDHB10Q9UN67 800 aa11.37□□□□□ -0.59
DDX41-210ENST00000509576 WIPI2Q9Y4P8 454 aa11.37□□□□□ -0.59
DDX41-210ENST00000509576 DOCK11Q5JSL3 2073 aa11.36□□□□□ -0.59
DDX41-210ENST00000509576 TRAV20A0A0B4J274 112 aa11.36□□□□□ -0.59
DDX41-210ENST00000509576 TMEM247A6NEH6 219 aa11.36□□□□□ -0.59
DDX41-210ENST00000509576 CPSF4LA6NMK7 179 aaKnown RBP11.36□□□□□ -0.59
DDX41-210ENST00000509576 ZNF726A6NNF4 738 aa11.36□□□□□ -0.59
DDX41-210ENST00000509576 DHHO43323 396 aa11.36□□□□□ -0.59
DDX41-210ENST00000509576 MGRN1O60291 552 aa11.36□□□□□ -0.59
DDX41-210ENST00000509576 ERLIN1O75477 346 aa11.36□□□□□ -0.59
DDX41-210ENST00000509576 MPZL1O95297 269 aa11.36□□□□□ -0.59
DDX41-210ENST00000509576 CH25HO95992 272 aa11.36□□□□□ -0.59
DDX41-210ENST00000509576 ASAH2BP0C7U1 165 aa11.36□□□□□ -0.59
DDX41-210ENST00000509576 MAKP20794 623 aa11.36□□□□□ -0.59
DDX41-210ENST00000509576 CD247P20963 164 aa11.36□□□□□ -0.59
DDX41-210ENST00000509576 FUT4P22083 530 aa11.36□□□□□ -0.59
DDX41-210ENST00000509576 MPV17P39210 176 aa11.36□□□□□ -0.59
DDX41-210ENST00000509576 CRYBB2P43320 205 aa11.36□□□□□ -0.59
DDX41-210ENST00000509576 IDH3AP50213 366 aa11.36□□□□□ -0.59
DDX41-210ENST00000509576 SLC18A1P54219 525 aa11.36□□□□□ -0.59
DDX41-210ENST00000509576 MAGOHP61326 146 aaKnown RBP11.36□□□□□ -0.59
DDX41-210ENST00000509576 ACTG1P63261 375 aa11.36□□□□□ -0.59
DDX41-210ENST00000509576 ZP4Q12836 540 aa11.36□□□□□ -0.59
DDX41-210ENST00000509576 AWAT1Q58HT5 328 aa11.36□□□□□ -0.59
DDX41-210ENST00000509576 ENTPD8Q5MY95 495 aa11.36□□□□□ -0.59
DDX41-210ENST00000509576 RGS7BPQ6MZT1 257 aaPredicted RBP11.36□□□□□ -0.59
DDX41-210ENST00000509576 USP43Q70EL4 1123 aa11.36□□□□□ -0.59
DDX41-210ENST00000509576 ZNF771Q7L3S4 317 aaPredicted RBP11.36□□□□□ -0.59
DDX41-210ENST00000509576 C1QL2Q7Z5L3 287 aa11.36□□□□□ -0.59
DDX41-210ENST00000509576 RETREG3Q86VR2 466 aa11.36□□□□□ -0.59
DDX41-210ENST00000509576 C22orf15Q8WYQ4 148 aa11.36□□□□□ -0.59
DDX41-210ENST00000509576 DVL3Q92997 716 aaPredicted RBP11.36□□□□□ -0.59
DDX41-210ENST00000509576 NMD3Q96D46 503 aaKnown RBP11.36□□□□□ -0.59
DDX41-210ENST00000509576 SEPHS2Q99611 448 aa11.36□□□□□ -0.59
DDX41-210ENST00000509576 MCHR1Q99705 422 aa11.36□□□□□ -0.59
DDX41-210ENST00000509576 MRPL13Q9BYD1 178 aaKnown RBP11.36□□□□□ -0.59
DDX41-210ENST00000509576 DENND2DQ9H6A0 471 aaPredicted RBP11.36□□□□□ -0.59
DDX41-210ENST00000509576 TMEM27Q9HBJ8 222 aa11.36□□□□□ -0.59
DDX41-210ENST00000509576 B3GAT2Q9NPZ5 323 aa11.36□□□□□ -0.59
DDX41-210ENST00000509576 HINT3Q9NQE9 182 aaKnown RBP11.36□□□□□ -0.59
DDX41-210ENST00000509576 GRIP1Q9Y3R0 1128 aa11.36□□□□□ -0.59
DDX41-210ENST00000509576 UGT2A1Q9Y4X1 527 aa11.36□□□□□ -0.59
DDX41-210ENST00000509576 ZSCAN5BA6NJL1 495 aa11.35□□□□□ -0.59
DDX41-210ENST00000509576 KPNA4O00629 521 aaPredicted RBP11.35□□□□□ -0.59
DDX41-210ENST00000509576 CHP2O43745 196 aa11.35□□□□□ -0.59
DDX41-210ENST00000509576 SNAP29O95721 258 aa11.35□□□□□ -0.59
DDX41-210ENST00000509576 QDPRP09417 244 aa11.35□□□□□ -0.59
DDX41-210ENST00000509576 RPS23P62266 143 aaKnown RBP11.35□□□□□ -0.59
DDX41-210ENST00000509576 GALK2Q01415 458 aa11.35□□□□□ -0.59
DDX41-210ENST00000509576 NKPD1Q17RQ9 610 aa11.35□□□□□ -0.59
DDX41-210ENST00000509576 RUNDC3AQ59EK9 446 aa11.35□□□□□ -0.59
DDX41-210ENST00000509576 UGT2A3Q6UWM9 527 aa11.35□□□□□ -0.59
DDX41-210ENST00000509576 USP51Q70EK9 711 aa11.35□□□□□ -0.59
DDX41-210ENST00000509576 ARMC8Q8IUR7 673 aa11.35□□□□□ -0.59
DDX41-210ENST00000509576 C10orf53Q8N6V4 93 aa11.35□□□□□ -0.59
DDX41-210ENST00000509576 MCHR2Q969V1 340 aa11.35□□□□□ -0.59
DDX41-210ENST00000509576 NABP1Q96AH0 204 aa11.35□□□□□ -0.59
DDX41-210ENST00000509576 TAMM41Q96BW9 452 aa11.35□□□□□ -0.59
DDX41-210ENST00000509576 EPYCQ99645 322 aa11.35□□□□□ -0.59
DDX41-210ENST00000509576 ZNF416Q9BWM5 594 aa11.35□□□□□ -0.59
DDX41-210ENST00000509576 RAD21L1Q9H4I0 556 aa11.35□□□□□ -0.59
DDX41-210ENST00000509576 TRIM33Q9UPN9 1127 aa11.35□□□□□ -0.59
DDX41-210ENST00000509576 LOC100509620A0A075B734 347 aa11.34□□□□□ -0.59
DDX41-210ENST00000509576 IGHV1-69-2A0A0G2JMI3 117 aa11.34□□□□□ -0.59
DDX41-210ENST00000509576 M0QX08 132 aa11.34□□□□□ -0.59
DDX41-210ENST00000509576 MT-ATP6P00846 226 aa11.34□□□□□ -0.59
DDX41-210ENST00000509576 IGHV1-46P01743 117 aa11.34□□□□□ -0.59
DDX41-210ENST00000509576 OR8G3PP0DMU2 310 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms