RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 HMGCS1Q01581 520 aa4.05□□□□□ -1.76
NIPBL-206ENST00000509429 ZNF616Q08AN1 781 aa4.05□□□□□ -1.76
NIPBL-206ENST00000509429 DLG2Q15700 870 aa4.05□□□□□ -1.76
NIPBL-206ENST00000509429 MRPL23Q16540 153 aaKnown RBP4.05□□□□□ -1.76
NIPBL-206ENST00000509429 PRTGQ2VWP7 1150 aa4.05□□□□□ -1.76
NIPBL-206ENST00000509429 ZNF528Q3MIS6 628 aa4.05□□□□□ -1.76
NIPBL-206ENST00000509429 SLC22A6Q4U2R8 563 aa4.05□□□□□ -1.76
NIPBL-206ENST00000509429 LRRC73Q5JTD7 316 aa4.05□□□□□ -1.76
NIPBL-206ENST00000509429 TPRG1LQ5T0D9 272 aa4.05□□□□□ -1.76
NIPBL-206ENST00000509429 REP15Q6BDI9 236 aa4.05□□□□□ -1.76
NIPBL-206ENST00000509429 CAPN13Q6MZZ7 669 aaPredicted RBP4.05□□□□□ -1.76
NIPBL-206ENST00000509429 FAHD1Q6P587 224 aa4.05□□□□□ -1.76
NIPBL-206ENST00000509429 FAM198BQ6UWH4 519 aa4.05□□□□□ -1.76
NIPBL-206ENST00000509429 LCLAT1Q6UWP7 414 aa4.05□□□□□ -1.76
NIPBL-206ENST00000509429 DRAM2Q6UX65 266 aa4.05□□□□□ -1.76
NIPBL-206ENST00000509429 FAM131AQ6UXB0 335 aa4.05□□□□□ -1.76
NIPBL-206ENST00000509429 DET1Q7L5Y6 550 aa4.05□□□□□ -1.76
NIPBL-206ENST00000509429 PIWIL4Q7Z3Z4 852 aaKnown RBP4.05□□□□□ -1.76
NIPBL-206ENST00000509429 SATL1Q86VE3 508 aa4.05□□□□□ -1.76
NIPBL-206ENST00000509429 PTOV1Q86YD1 416 aa4.05□□□□□ -1.76
NIPBL-206ENST00000509429 TMEM25Q86YD3 366 aa4.05□□□□□ -1.76
NIPBL-206ENST00000509429 STHQ8IWL8 128 aa4.05□□□□□ -1.76
NIPBL-206ENST00000509429 ZDHHC23Q8IYP9 409 aa4.05□□□□□ -1.76
NIPBL-206ENST00000509429 DNAJC22Q8N4W6 341 aa4.05□□□□□ -1.76
NIPBL-206ENST00000509429 C12orf45Q8N5I9 185 aaPredicted RBP4.05□□□□□ -1.76
NIPBL-206ENST00000509429 RBMXL3Q8N7X1 1067 aaKnown RBP4.05□□□□□ -1.76
NIPBL-206ENST00000509429 ZSCAN4Q8NAM6 433 aaPredicted RBP4.05□□□□□ -1.76
NIPBL-206ENST00000509429 SIDT2Q8NBJ9 832 aaKnown RBP4.05□□□□□ -1.76
NIPBL-206ENST00000509429 LFNGQ8NES3 379 aa4.05□□□□□ -1.76
NIPBL-206ENST00000509429 ATP6V1C2Q8NEY4 427 aa4.05□□□□□ -1.76
NIPBL-206ENST00000509429 ENGASEQ8NFI3 743 aa4.05□□□□□ -1.76
NIPBL-206ENST00000509429 KBTBD8Q8NFY9 601 aa4.05□□□□□ -1.76
NIPBL-206ENST00000509429 OR10G3Q8NGC4 313 aa4.05□□□□□ -1.76
NIPBL-206ENST00000509429 OR4K2Q8NGD2 314 aa4.05□□□□□ -1.76
NIPBL-206ENST00000509429 OR52L2PQ8NGH6 319 aa4.05□□□□□ -1.76
NIPBL-206ENST00000509429 OR1K1Q8NGR3 316 aa4.05□□□□□ -1.76
NIPBL-206ENST00000509429 OR5AK3PQ8NH89 298 aa4.05□□□□□ -1.76
NIPBL-206ENST00000509429 SPRYD4Q8WW59 207 aaPredicted RBP4.05□□□□□ -1.76
NIPBL-206ENST00000509429 ASB15Q8WXK1 588 aa4.05□□□□□ -1.76
NIPBL-206ENST00000509429 GHSRQ92847 366 aa4.05□□□□□ -1.76
NIPBL-206ENST00000509429 SNAPC3Q92966 411 aa4.05□□□□□ -1.76
NIPBL-206ENST00000509429 NTNG2Q96CW9 530 aa4.05□□□□□ -1.76
NIPBL-206ENST00000509429 PAGE5Q96GU1 130 aa4.05□□□□□ -1.76
NIPBL-206ENST00000509429 MS4A14Q96JA4 679 aa4.05□□□□□ -1.76
NIPBL-206ENST00000509429 GPR174Q9BXC1 333 aa4.05□□□□□ -1.76
NIPBL-206ENST00000509429 UGT2B28Q9BY64 529 aa4.05□□□□□ -1.76
NIPBL-206ENST00000509429 SPATC1LQ9H0A9 340 aa4.05□□□□□ -1.76
NIPBL-206ENST00000509429 TLNRD1Q9H1K6 362 aa4.05□□□□□ -1.76
NIPBL-206ENST00000509429 SLC25A32Q9H2D1 315 aa4.05□□□□□ -1.76
NIPBL-206ENST00000509429 KCNK15Q9H427 330 aa4.05□□□□□ -1.76
NIPBL-206ENST00000509429 FN3KQ9H479 309 aa4.05□□□□□ -1.76
NIPBL-206ENST00000509429 FKRPQ9H9S5 495 aa4.05□□□□□ -1.76
NIPBL-206ENST00000509429 PRSS16Q9NQE7 514 aa4.05□□□□□ -1.76
NIPBL-206ENST00000509429 ANKRD10Q9NXR5 420 aa4.05□□□□□ -1.76
NIPBL-206ENST00000509429 DHCR7Q9UBM7 475 aaKnown RBP4.05□□□□□ -1.76
NIPBL-206ENST00000509429 NKX1-2Q9UD57 310 aaPredicted RBP4.05□□□□□ -1.76
NIPBL-206ENST00000509429 SCP2D1Q9UJQ7 156 aa4.05□□□□□ -1.76
NIPBL-206ENST00000509429 GNG8Q9UK08 70 aa4.05□□□□□ -1.76
NIPBL-206ENST00000509429 NDRG4Q9ULP0 352 aaKnown RBP4.05□□□□□ -1.76
NIPBL-206ENST00000509429 ING4Q9UNL4 249 aa4.05□□□□□ -1.76
NIPBL-206ENST00000509429 FARSAQ9Y285 508 aaKnown RBP4.05□□□□□ -1.76
NIPBL-206ENST00000509429 HSPB11Q9Y547 144 aa4.05□□□□□ -1.76
NIPBL-206ENST00000509429 CEPT1Q9Y6K0 416 aa4.05□□□□□ -1.76
NIPBL-206ENST00000509429 PKD1L3Q7Z443 1732 aa4.04□□□□□ -1.76
NIPBL-206ENST00000509429 ADGRA3Q8IWK6 1321 aa4.04□□□□□ -1.76
NIPBL-206ENST00000509429 ADGRA2Q96PE1 1338 aa4.04□□□□□ -1.76
NIPBL-206ENST00000509429 LOC105371242A0A075B767 164 aa4.04□□□□□ -1.76
NIPBL-206ENST00000509429 KBTBD11-OT1A0A1B0GTJ5 212 aa4.04□□□□□ -1.76
NIPBL-206ENST00000509429 ZCWPW2A0A1B0GU75 182 aa4.04□□□□□ -1.76
NIPBL-206ENST00000509429 LOC102723971A0A1B0GUV8 181 aa4.04□□□□□ -1.76
NIPBL-206ENST00000509429 A0A1W2PPE3 182 aa4.04□□□□□ -1.76
NIPBL-206ENST00000509429 TBC1D3BA6NDS4 549 aa4.04□□□□□ -1.76
NIPBL-206ENST00000509429 ZNF840PA6NDX5 716 aa4.04□□□□□ -1.76
NIPBL-206ENST00000509429 DNASE2O00115 360 aaPredicted RBP4.04□□□□□ -1.76
NIPBL-206ENST00000509429 TPST2O60704 377 aa4.04□□□□□ -1.76
NIPBL-206ENST00000509429 RNASEH1O60930 286 aaKnown RBP4.04□□□□□ -1.76
NIPBL-206ENST00000509429 GAS8-AS1O95177 125 aa4.04□□□□□ -1.76
NIPBL-206ENST00000509429 TNFAIP8O95379 198 aa4.04□□□□□ -1.76
NIPBL-206ENST00000509429 MT-CO2P00403 227 aa4.04□□□□□ -1.76
NIPBL-206ENST00000509429 C9P02748 559 aa4.04□□□□□ -1.76
NIPBL-206ENST00000509429 MMP1P03956 469 aa4.04□□□□□ -1.76
NIPBL-206ENST00000509429 RLN2P04090 185 aa4.04□□□□□ -1.76
NIPBL-206ENST00000509429 TFAP2AP05549 437 aa4.04□□□□□ -1.76
NIPBL-206ENST00000509429 BPGMP07738 259 aa4.04□□□□□ -1.76
NIPBL-206ENST00000509429 TRAPPC2P0DI81 140 aa4.04□□□□□ -1.76
NIPBL-206ENST00000509429 TRAPPC2BP0DI82 140 aa4.04□□□□□ -1.76
NIPBL-206ENST00000509429 SPP1P10451 314 aa4.04□□□□□ -1.76
NIPBL-206ENST00000509429 EDN2P20800 178 aa4.04□□□□□ -1.76
NIPBL-206ENST00000509429 FUT3P21217 361 aa4.04□□□□□ -1.76
NIPBL-206ENST00000509429 ACADLP28330 430 aa4.04□□□□□ -1.76
NIPBL-206ENST00000509429 HTR2CP28335 458 aa4.04□□□□□ -1.76
NIPBL-206ENST00000509429 S100A7P31151 101 aa4.04□□□□□ -1.76
NIPBL-206ENST00000509429 GKP32189 559 aa4.04□□□□□ -1.76
NIPBL-206ENST00000509429 KIR2DL3P43628 341 aa4.04□□□□□ -1.76
NIPBL-206ENST00000509429 HTR5AP47898 357 aa4.04□□□□□ -1.76
NIPBL-206ENST00000509429 LGALS7P47929 136 aa4.04□□□□□ -1.76
NIPBL-206ENST00000509429 EVX1P49640 407 aa4.04□□□□□ -1.76
NIPBL-206ENST00000509429 TNFSF10P50591 281 aa4.04□□□□□ -1.76
NIPBL-206ENST00000509429 NOVA1P51513 510 aaKnown RBP4.04□□□□□ -1.76
NIPBL-206ENST00000509429 CCL11P51671 97 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms