RNA–Protein interactions for RNA: ENST00000509206.1

RNF4-211, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-211ENST00000509206 KLC3Q6P597 504 aa3.2□□□□□ -1.9
RNF4-211ENST00000509206 ZCCHC12Q6PEW1 402 aa3.2□□□□□ -1.9
RNF4-211ENST00000509206 ZNF813Q6ZN06 617 aa3.2□□□□□ -1.9
RNF4-211ENST00000509206 EIF3MQ7L2H7 374 aaKnown RBP3.2□□□□□ -1.9
RNF4-211ENST00000509206 ZNF551Q7Z340 670 aaPredicted RBP3.2□□□□□ -1.9
RNF4-211ENST00000509206 GRINAQ7Z429 371 aa3.2□□□□□ -1.9
RNF4-211ENST00000509206 ISCA2Q86U28 154 aa3.2□□□□□ -1.9
RNF4-211ENST00000509206 LRRC28Q86X40 367 aaPredicted RBP3.2□□□□□ -1.9
RNF4-211ENST00000509206 SNX32Q86XE0 403 aa3.2□□□□□ -1.9
RNF4-211ENST00000509206 VSTM4Q8IW00 320 aa3.2□□□□□ -1.9
RNF4-211ENST00000509206 PDZD9Q8IXQ8 264 aa3.2□□□□□ -1.9
RNF4-211ENST00000509206 TMEM99Q8N816 258 aa3.2□□□□□ -1.9
RNF4-211ENST00000509206 NAT8LQ8N9F0 302 aa3.2□□□□□ -1.9
RNF4-211ENST00000509206 ZIC4Q8N9L1 334 aa3.2□□□□□ -1.9
RNF4-211ENST00000509206 FAM156AQ8NDB6 213 aa3.2□□□□□ -1.9
RNF4-211ENST00000509206 WFDC9Q8NEX5 89 aa3.2□□□□□ -1.9
RNF4-211ENST00000509206 OR8B3Q8NGG8 313 aa3.2□□□□□ -1.9
RNF4-211ENST00000509206 OR1J2Q8NGS2 313 aa3.2□□□□□ -1.9
RNF4-211ENST00000509206 OR5R1Q8NH85 324 aa3.2□□□□□ -1.9
RNF4-211ENST00000509206 C8orf46Q8TAG6 207 aa3.2□□□□□ -1.9
RNF4-211ENST00000509206 ZNF519Q8TB69 540 aa3.2□□□□□ -1.9
RNF4-211ENST00000509206 MZB1Q8WU39 189 aa3.2□□□□□ -1.9
RNF4-211ENST00000509206 CDS1Q92903 461 aa3.2□□□□□ -1.9
RNF4-211ENST00000509206 LHX4Q969G2 390 aa3.2□□□□□ -1.9
RNF4-211ENST00000509206 MAGOHBQ96A72 148 aaKnown RBP3.2□□□□□ -1.9
RNF4-211ENST00000509206 OTUB1Q96FW1 271 aaPredicted RBP3.2□□□□□ -1.9
RNF4-211ENST00000509206 MAGEB18Q96M61 343 aa3.2□□□□□ -1.9
RNF4-211ENST00000509206 MS4A4EQ96PG1 132 aa3.2□□□□□ -1.9
RNF4-211ENST00000509206 TSPAN32Q96QS1 320 aa3.2□□□□□ -1.9
RNF4-211ENST00000509206 OR8B2Q96RD0 313 aa3.2□□□□□ -1.9
RNF4-211ENST00000509206 DCTN5Q9BTE1 182 aa3.2□□□□□ -1.9
RNF4-211ENST00000509206 EBPLQ9BY08 206 aa3.2□□□□□ -1.9
RNF4-211ENST00000509206 LINC00470Q9BZP3 86 aa3.2□□□□□ -1.9
RNF4-211ENST00000509206 OR11A1Q9GZK7 315 aa3.2□□□□□ -1.9
RNF4-211ENST00000509206 CYSLTR2Q9NS75 346 aa3.2□□□□□ -1.9
RNF4-211ENST00000509206 FARSBQ9NSD9 589 aaKnown RBP3.2□□□□□ -1.9
RNF4-211ENST00000509206 TMEM106BQ9NUM4 274 aa3.2□□□□□ -1.9
RNF4-211ENST00000509206 LMBRD1Q9NUN5 540 aa3.2□□□□□ -1.9
RNF4-211ENST00000509206 TBK1Q9UHD2 729 aa3.2□□□□□ -1.9
RNF4-211ENST00000509206 VPREB3Q9UKI3 123 aa3.2□□□□□ -1.9
RNF4-211ENST00000509206 PCDHGB4Q9UN71 923 aa3.2□□□□□ -1.9
RNF4-211ENST00000509206 FAF1Q9UNN5 650 aaPredicted RBP3.2□□□□□ -1.9
RNF4-211ENST00000509206 CHMP2BQ9UQN3 213 aa3.2□□□□□ -1.9
RNF4-211ENST00000509206 PSAT1Q9Y617 370 aa3.2□□□□□ -1.9
RNF4-211ENST00000509206 TMED7-TICAM2A0A0A6YYA0 188 aa3.19□□□□□ -1.9
RNF4-211ENST00000509206 IGHV1-69DA0A0B4J2H0 117 aa3.19□□□□□ -1.9
RNF4-211ENST00000509206 A0A0U1RQK1 487 aa3.19□□□□□ -1.9
RNF4-211ENST00000509206 CENPVL1A0A0U1RR11 272 aa3.19□□□□□ -1.9
RNF4-211ENST00000509206 CENPVL3A0A0U1RRI6 287 aa3.19□□□□□ -1.9
RNF4-211ENST00000509206 CEACAM18A8MTB9 384 aa3.19□□□□□ -1.9
RNF4-211ENST00000509206 ZNF99A8MXY4 864 aaPredicted RBP3.19□□□□□ -1.9
RNF4-211ENST00000509206 M0R3G1 203 aa3.19□□□□□ -1.9
RNF4-211ENST00000509206 OR7A17O14581 309 aa3.19□□□□□ -1.9
RNF4-211ENST00000509206 ENSAO43768 121 aaKnown RBP3.19□□□□□ -1.9
RNF4-211ENST00000509206 AKAP8O43823 692 aaKnown RBP3.19□□□□□ -1.9
RNF4-211ENST00000509206 TMEM127O75204 238 aa3.19□□□□□ -1.9
RNF4-211ENST00000509206 UBL3O95164 117 aa3.19□□□□□ -1.9
RNF4-211ENST00000509206 PSMG1O95456 288 aa3.19□□□□□ -1.9
RNF4-211ENST00000509206 LY86O95711 162 aa3.19□□□□□ -1.9
RNF4-211ENST00000509206 MBD3O95983 291 aa3.19□□□□□ -1.9
RNF4-211ENST00000509206 OTCP00480 354 aa3.19□□□□□ -1.9
RNF4-211ENST00000509206 PTHP01270 115 aa3.19□□□□□ -1.9
RNF4-211ENST00000509206 IGHV1-69P01742 117 aa3.19□□□□□ -1.9
RNF4-211ENST00000509206 IGHV1-46P01743 117 aa3.19□□□□□ -1.9
RNF4-211ENST00000509206 LIPFP07098 398 aa3.19□□□□□ -1.9
RNF4-211ENST00000509206 CHRM4P08173 479 aa3.19□□□□□ -1.9
RNF4-211ENST00000509206 KRT16P08779 473 aa3.19□□□□□ -1.9
RNF4-211ENST00000509206 QDPRP09417 244 aa3.19□□□□□ -1.9
RNF4-211ENST00000509206 FBP1P09467 338 aa3.19□□□□□ -1.9
RNF4-211ENST00000509206 WNT2P09544 360 aa3.19□□□□□ -1.9
RNF4-211ENST00000509206 CD28P10747 220 aa3.19□□□□□ -1.9
RNF4-211ENST00000509206 HSD3B1P14060 373 aa3.19□□□□□ -1.9
RNF4-211ENST00000509206 UQCRBP14927 111 aa3.19□□□□□ -1.9
RNF4-211ENST00000509206 ZNF250P15622 560 aa3.19□□□□□ -1.9
RNF4-211ENST00000509206 ZNF43P17038 809 aa3.19□□□□□ -1.9
RNF4-211ENST00000509206 TNFRSF1AP19438 455 aa3.19□□□□□ -1.9
RNF4-211ENST00000509206 CCNOP22674 350 aa3.19□□□□□ -1.9
RNF4-211ENST00000509206 EEF1B2P24534 225 aaKnown RBP3.19□□□□□ -1.9
RNF4-211ENST00000509206 CXCR1P25024 350 aa3.19□□□□□ -1.9
RNF4-211ENST00000509206 EPHA3P29320 983 aa3.19□□□□□ -1.9
RNF4-211ENST00000509206 CRABP2P29373 138 aa3.19□□□□□ -1.9
RNF4-211ENST00000509206 HMOX2P30519 316 aa3.19□□□□□ -1.9
RNF4-211ENST00000509206 MAGEA3P43357 314 aa3.19□□□□□ -1.9
RNF4-211ENST00000509206 KIR2DS4P43632 304 aa3.19□□□□□ -1.9
RNF4-211ENST00000509206 CLDN17P56750 224 aa3.19□□□□□ -1.9
RNF4-211ENST00000509206 H3F3AP84243 136 aa3.19□□□□□ -1.9
RNF4-211ENST00000509206 TNFAIP6P98066 277 aaPredicted RBP3.19□□□□□ -1.9
RNF4-211ENST00000509206 DGCR2P98153 550 aa3.19□□□□□ -1.9
RNF4-211ENST00000509206 RASA2Q15283 850 aa3.19□□□□□ -1.9
RNF4-211ENST00000509206 GPR68Q15743 365 aa3.19□□□□□ -1.9
RNF4-211ENST00000509206 TBC1D28Q2M2D7 210 aa3.19□□□□□ -1.9
RNF4-211ENST00000509206 ZNF718Q3SXZ3 478 aa3.19□□□□□ -1.9
RNF4-211ENST00000509206 SPDYE7PQ495Y7 208 aa3.19□□□□□ -1.9
RNF4-211ENST00000509206 ZMAT1Q5H9K5 638 aa3.19□□□□□ -1.9
RNF4-211ENST00000509206 DCST2Q5T1A1 773 aa3.19□□□□□ -1.9
RNF4-211ENST00000509206 PDZK1Q5T2W1 519 aa3.19□□□□□ -1.9
RNF4-211ENST00000509206 OGFOD2Q6N063 350 aa3.19□□□□□ -1.9
RNF4-211ENST00000509206 METTL2BQ6P1Q9 378 aaKnown RBP3.19□□□□□ -1.9
RNF4-211ENST00000509206 KCTD18Q6PI47 426 aaPredicted RBP3.19□□□□□ -1.9
RNF4-211ENST00000509206 UNQ6126/PRO20091Q6UXV3 157 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms