RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 DHHO43323 396 aa8.02□□□□□ -1.13
NUP54-207ENST00000508583 PTP4A3O75365 173 aa8.02□□□□□ -1.13
NUP54-207ENST00000508583 CTAG2O75638 210 aa8.02□□□□□ -1.13
NUP54-207ENST00000508583 TRMUO75648 421 aaKnown RBP8.02□□□□□ -1.13
NUP54-207ENST00000508583 UBL3O95164 117 aa8.02□□□□□ -1.13
NUP54-207ENST00000508583 CD3EP07766 207 aa8.02□□□□□ -1.13
NUP54-207ENST00000508583 QDPRP09417 244 aa8.02□□□□□ -1.13
NUP54-207ENST00000508583 OR8G3PP0DMU2 310 aa8.02□□□□□ -1.13
NUP54-207ENST00000508583 NPR2P20594 1047 aa8.02□□□□□ -1.13
NUP54-207ENST00000508583 FUT4P22083 530 aa8.02□□□□□ -1.13
NUP54-207ENST00000508583 PTAFRP25105 342 aa8.02□□□□□ -1.13
NUP54-207ENST00000508583 CRABP1P29762 137 aa8.02□□□□□ -1.13
NUP54-207ENST00000508583 ERVK-25P63136 954 aa8.02□□□□□ -1.13
NUP54-207ENST00000508583 KRR1Q13601 381 aaKnown RBP8.02□□□□□ -1.13
NUP54-207ENST00000508583 ATP6AP1Q15904 470 aa8.02□□□□□ -1.13
NUP54-207ENST00000508583 ZSCAN26Q16670 478 aa8.02□□□□□ -1.13
NUP54-207ENST00000508583 C3orf36Q3SXR2 165 aa8.02□□□□□ -1.13
NUP54-207ENST00000508583 TBRG1Q3YBR2 411 aa8.02□□□□□ -1.13
NUP54-207ENST00000508583 ARMC4Q5T2S8 1044 aa8.02□□□□□ -1.13
NUP54-207ENST00000508583 SHQ1Q6PI26 577 aaKnown RBP8.02□□□□□ -1.13
NUP54-207ENST00000508583 CD300LDQ6UXZ3 194 aa8.02□□□□□ -1.13
NUP54-207ENST00000508583 ZNF813Q6ZN06 617 aa8.02□□□□□ -1.13
NUP54-207ENST00000508583 RASSF6Q6ZTQ3 369 aa8.02□□□□□ -1.13
NUP54-207ENST00000508583 IGFN1Q86VF2 1251 aa8.02□□□□□ -1.13
NUP54-207ENST00000508583 JAZF1Q86VZ6 243 aa8.02□□□□□ -1.13
NUP54-207ENST00000508583 MEX3DQ86XN8 651 aaKnown RBP8.02□□□□□ -1.13
NUP54-207ENST00000508583 HIPK1Q86Z02 1210 aa8.02□□□□□ -1.13
NUP54-207ENST00000508583 ZDHHC13Q8IUH4 622 aa8.02□□□□□ -1.13
NUP54-207ENST00000508583 SVOPLQ8N434 492 aa8.02□□□□□ -1.13
NUP54-207ENST00000508583 FAM169BQ8N8A8 192 aa8.02□□□□□ -1.13
NUP54-207ENST00000508583 LRRC75AQ8NAA5 344 aa8.02□□□□□ -1.13
NUP54-207ENST00000508583 SYT14Q8NB59 555 aa8.02□□□□□ -1.13
NUP54-207ENST00000508583 OR9Q2Q8NGE9 314 aa8.02□□□□□ -1.13
NUP54-207ENST00000508583 OR52N5Q8NH56 324 aa8.02□□□□□ -1.13
NUP54-207ENST00000508583 ZNF519Q8TB69 540 aa8.02□□□□□ -1.13
NUP54-207ENST00000508583 TEX47Q8TBZ9 253 aa8.02□□□□□ -1.13
NUP54-207ENST00000508583 TSPAN32Q96QS1 320 aa8.02□□□□□ -1.13
NUP54-207ENST00000508583 KCNK17Q96T54 332 aa8.02□□□□□ -1.13
NUP54-207ENST00000508583 FOXB1Q99853 325 aa8.02□□□□□ -1.13
NUP54-207ENST00000508583 KCNS3Q9BQ31 491 aa8.02□□□□□ -1.13
NUP54-207ENST00000508583 IFT27Q9BW83 186 aa8.02□□□□□ -1.13
NUP54-207ENST00000508583 MRPL13Q9BYD1 178 aaKnown RBP8.02□□□□□ -1.13
NUP54-207ENST00000508583 OR52D1Q9H346 318 aa8.02□□□□□ -1.13
NUP54-207ENST00000508583 NRIP3Q9NQ35 241 aa8.02□□□□□ -1.13
NUP54-207ENST00000508583 TBC1D23Q9NUY8 699 aa8.02□□□□□ -1.13
NUP54-207ENST00000508583 IL20Q9NYY1 176 aa8.02□□□□□ -1.13
NUP54-207ENST00000508583 PDP1Q9P0J1 537 aaPredicted RBP8.02□□□□□ -1.13
NUP54-207ENST00000508583 ZNF346Q9UL40 294 aaKnown RBP8.02□□□□□ -1.13
NUP54-207ENST00000508583 SLC25A15Q9Y619 301 aa8.02□□□□□ -1.13
NUP54-207ENST00000508583 DCHS2Q6V1P9 2916 aa8.02□□□□□ -1.13
NUP54-207ENST00000508583 ABCA4P78363 2273 aa8.01□□□□□ -1.13
NUP54-207ENST00000508583 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.01□□□□□ -1.13
NUP54-207ENST00000508583 FAM221AA4D161 298 aa8.01□□□□□ -1.13
NUP54-207ENST00000508583 PRSS37A4D1T9 235 aa8.01□□□□□ -1.13
NUP54-207ENST00000508583 ARHGEF9O43307 516 aa8.01□□□□□ -1.13
NUP54-207ENST00000508583 TIPRLO75663 272 aa8.01□□□□□ -1.13
NUP54-207ENST00000508583 TXNDC12O95881 172 aa8.01□□□□□ -1.13
NUP54-207ENST00000508583 RENP00797 406 aa8.01□□□□□ -1.13
NUP54-207ENST00000508583 PTHP01270 115 aa8.01□□□□□ -1.13
NUP54-207ENST00000508583 GASTP01350 101 aa8.01□□□□□ -1.13
NUP54-207ENST00000508583 IFNGP01579 166 aa8.01□□□□□ -1.13
NUP54-207ENST00000508583 HRGP04196 525 aa8.01□□□□□ -1.13
NUP54-207ENST00000508583 THBDP07204 575 aa8.01□□□□□ -1.13
NUP54-207ENST00000508583 ARR3P36575 388 aa8.01□□□□□ -1.13
NUP54-207ENST00000508583 CAPZA2P47755 286 aa8.01□□□□□ -1.13
NUP54-207ENST00000508583 ERFP50548 548 aa8.01□□□□□ -1.13
NUP54-207ENST00000508583 ZNF133P52736 654 aaPredicted RBP8.01□□□□□ -1.13
NUP54-207ENST00000508583 ARF1P84077 181 aaKnown RBP8.01□□□□□ -1.13
NUP54-207ENST00000508583 LGALS3BPQ08380 585 aa8.01□□□□□ -1.13
NUP54-207ENST00000508583 FHL1Q13642 323 aa8.01□□□□□ -1.13
NUP54-207ENST00000508583 CCNIQ14094 377 aa8.01□□□□□ -1.13
NUP54-207ENST00000508583 KPNB1Q14974 876 aaKnown RBP8.01□□□□□ -1.13
NUP54-207ENST00000508583 TSC22D1Q15714 1073 aa8.01□□□□□ -1.13
NUP54-207ENST00000508583 HIST3H3Q16695 136 aa8.01□□□□□ -1.13
NUP54-207ENST00000508583 SLC36A2Q495M3 483 aa8.01□□□□□ -1.13
NUP54-207ENST00000508583 C10orf128Q5T292 105 aa8.01□□□□□ -1.13
NUP54-207ENST00000508583 ZNF770Q6IQ21 691 aaPredicted RBP8.01□□□□□ -1.13
NUP54-207ENST00000508583 ALKBH2Q6NS38 261 aa8.01□□□□□ -1.13
NUP54-207ENST00000508583 FAM122BQ7Z309 247 aa8.01□□□□□ -1.13
NUP54-207ENST00000508583 ZNF295-AS1Q8N0V1 137 aa8.01□□□□□ -1.13
NUP54-207ENST00000508583 ATG16L2Q8NAA4 619 aa8.01□□□□□ -1.13
NUP54-207ENST00000508583 IL17RDQ8NFM7 739 aa8.01□□□□□ -1.13
NUP54-207ENST00000508583 OR2T33Q8NG76 320 aa8.01□□□□□ -1.13
NUP54-207ENST00000508583 OR5K1Q8NHB7 308 aa8.01□□□□□ -1.13
NUP54-207ENST00000508583 BCL2L2Q92843 193 aaPredicted RBP8.01□□□□□ -1.13
NUP54-207ENST00000508583 STMN2Q93045 179 aa8.01□□□□□ -1.13
NUP54-207ENST00000508583 MCHR2Q969V1 340 aa8.01□□□□□ -1.13
NUP54-207ENST00000508583 GTPBP3Q969Y2 492 aaKnown RBP8.01□□□□□ -1.13
NUP54-207ENST00000508583 SLCO4A1Q96BD0 722 aa8.01□□□□□ -1.13
NUP54-207ENST00000508583 PIK3IP1Q96FE7 263 aa8.01□□□□□ -1.13
NUP54-207ENST00000508583 PLPPR2Q96GM1 343 aa8.01□□□□□ -1.13
NUP54-207ENST00000508583 ERMAPQ96PL5 475 aaPredicted RBP8.01□□□□□ -1.13
NUP54-207ENST00000508583 SNX18Q96RF0 628 aa8.01□□□□□ -1.13
NUP54-207ENST00000508583 FEVQ99581 238 aa8.01□□□□□ -1.13
NUP54-207ENST00000508583 PRRG3Q9BZD7 231 aa8.01□□□□□ -1.13
NUP54-207ENST00000508583 RNF115Q9Y4L5 304 aa8.01□□□□□ -1.13
NUP54-207ENST00000508583 IER3IP1Q9Y5U9 82 aa8.01□□□□□ -1.13
NUP54-207ENST00000508583 FBN2P35556 2912 aa8.01□□□□□ -1.13
NUP54-207ENST00000508583 CACNA1DQ01668 2161 aa8□□□□□ -1.13
NUP54-207ENST00000508583 A0A096LPE4 126 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms