RNA–Protein interactions for RNA: ENST00000508308.1

HMGN1P16-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 16, humanhuman

BASIC

Gene HMGN1P16, Length 283 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P16-201ENST00000508308 C11orf98E9PRG8 122 aa5.5□□□□□ -1.53
HMGN1P16-201ENST00000508308 M0R233 179 aa5.5□□□□□ -1.53
HMGN1P16-201ENST00000508308 CHP2O43745 196 aa5.5□□□□□ -1.53
HMGN1P16-201ENST00000508308 AKAP8O43823 692 aaKnown RBP5.5□□□□□ -1.53
HMGN1P16-201ENST00000508308 SERPINB7O75635 380 aa5.5□□□□□ -1.53
HMGN1P16-201ENST00000508308 VENTXO95231 258 aa5.5□□□□□ -1.53
HMGN1P16-201ENST00000508308 CH25HO95992 272 aa5.5□□□□□ -1.53
HMGN1P16-201ENST00000508308 SERPINA5P05154 406 aa5.5□□□□□ -1.53
HMGN1P16-201ENST00000508308 C8BP07358 591 aa5.5□□□□□ -1.53
HMGN1P16-201ENST00000508308 MMP7P09237 267 aaPredicted RBP5.5□□□□□ -1.53
HMGN1P16-201ENST00000508308 ASAH2BP0C7U1 165 aa5.5□□□□□ -1.53
HMGN1P16-201ENST00000508308 PGA4P0DJD7 388 aa5.5□□□□□ -1.53
HMGN1P16-201ENST00000508308 PGA3P0DJD8 388 aa5.5□□□□□ -1.53
HMGN1P16-201ENST00000508308 ADORA3P0DMS8 318 aa5.5□□□□□ -1.53
HMGN1P16-201ENST00000508308 NAT2P11245 290 aa5.5□□□□□ -1.53
HMGN1P16-201ENST00000508308 CCL2P13500 99 aa5.5□□□□□ -1.53
HMGN1P16-201ENST00000508308 ITGA2P17301 1181 aa5.5□□□□□ -1.53
HMGN1P16-201ENST00000508308 HNF1AP20823 631 aa5.5□□□□□ -1.53
HMGN1P16-201ENST00000508308 FUT4P22083 530 aa5.5□□□□□ -1.53
HMGN1P16-201ENST00000508308 AHCYP23526 432 aa5.5□□□□□ -1.53
HMGN1P16-201ENST00000508308 MAGEB1P43366 347 aa5.5□□□□□ -1.53
HMGN1P16-201ENST00000508308 CSNK1A1P48729 337 aa5.5□□□□□ -1.53
HMGN1P16-201ENST00000508308 ATP4BP51164 291 aa5.5□□□□□ -1.53
HMGN1P16-201ENST00000508308 DVL1P1P54792 670 aaPredicted RBP5.5□□□□□ -1.53
HMGN1P16-201ENST00000508308 MTPNP58546 118 aa5.5□□□□□ -1.53
HMGN1P16-201ENST00000508308 STX1BP61266 288 aa5.5□□□□□ -1.53
HMGN1P16-201ENST00000508308 ERVS71-1P61550 626 aa5.5□□□□□ -1.53
HMGN1P16-201ENST00000508308 SQLEQ14534 574 aa5.5□□□□□ -1.53
HMGN1P16-201ENST00000508308 MELKQ14680 651 aa5.5□□□□□ -1.53
HMGN1P16-201ENST00000508308 ENTPD8Q5MY95 495 aa5.5□□□□□ -1.53
HMGN1P16-201ENST00000508308 AGBL2Q5U5Z8 902 aa5.5□□□□□ -1.53
HMGN1P16-201ENST00000508308 ZNF613Q6PF04 617 aa5.5□□□□□ -1.53
HMGN1P16-201ENST00000508308 SLC35D2Q76EJ3 337 aa5.5□□□□□ -1.53
HMGN1P16-201ENST00000508308 PIWIL3Q7Z3Z3 882 aaKnown RBP5.5□□□□□ -1.53
HMGN1P16-201ENST00000508308 RANBP3LQ86VV4 465 aaPredicted RBP5.5□□□□□ -1.53
HMGN1P16-201ENST00000508308 RFLNBQ8N5W9 214 aa5.5□□□□□ -1.53
HMGN1P16-201ENST00000508308 C10orf53Q8N6V4 93 aa5.5□□□□□ -1.53
HMGN1P16-201ENST00000508308 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.5□□□□□ -1.53
HMGN1P16-201ENST00000508308 RNF217Q8TC41 542 aa5.5□□□□□ -1.53
HMGN1P16-201ENST00000508308 ADAMTS16Q8TE57 1224 aa5.5□□□□□ -1.53
HMGN1P16-201ENST00000508308 GTF3AQ92664 365 aaKnown RBP5.5□□□□□ -1.53
HMGN1P16-201ENST00000508308 NMD3Q96D46 503 aaKnown RBP5.5□□□□□ -1.53
HMGN1P16-201ENST00000508308 ZNF607Q96SK3 696 aa5.5□□□□□ -1.53
HMGN1P16-201ENST00000508308 EPYCQ99645 322 aa5.5□□□□□ -1.53
HMGN1P16-201ENST00000508308 CGREF1Q99674 301 aa5.5□□□□□ -1.53
HMGN1P16-201ENST00000508308 MRPL13Q9BYD1 178 aaKnown RBP5.5□□□□□ -1.53
HMGN1P16-201ENST00000508308 PCDHAC1Q9H158 963 aa5.5□□□□□ -1.53
HMGN1P16-201ENST00000508308 DENND2DQ9H6A0 471 aaPredicted RBP5.5□□□□□ -1.53
HMGN1P16-201ENST00000508308 NARFLQ9H6Q4 476 aa5.5□□□□□ -1.53
HMGN1P16-201ENST00000508308 KAT8Q9H7Z6 458 aaKnown RBP5.5□□□□□ -1.53
HMGN1P16-201ENST00000508308 CACYBPQ9HB71 228 aaKnown RBP5.5□□□□□ -1.53
HMGN1P16-201ENST00000508308 ZNF275Q9NSD4 429 aaPredicted RBP5.5□□□□□ -1.53
HMGN1P16-201ENST00000508308 TMEM38BQ9NVV0 291 aa5.5□□□□□ -1.53
HMGN1P16-201ENST00000508308 TREM2Q9NZC2 230 aa5.5□□□□□ -1.53
HMGN1P16-201ENST00000508308 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.5□□□□□ -1.53
HMGN1P16-201ENST00000508308 IGLV3-9A0A075B6K5 115 aa5.49□□□□□ -1.53
HMGN1P16-201ENST00000508308 VSTM5A8MXK1 200 aa5.49□□□□□ -1.53
HMGN1P16-201ENST00000508308 EVPLLA8MZ36 301 aa5.49□□□□□ -1.53
HMGN1P16-201ENST00000508308 B4DSR2 109 aa5.49□□□□□ -1.53
HMGN1P16-201ENST00000508308 KPNA4O00629 521 aaPredicted RBP5.49□□□□□ -1.53
HMGN1P16-201ENST00000508308 FBP2O00757 339 aa5.49□□□□□ -1.53
HMGN1P16-201ENST00000508308 DHHO43323 396 aa5.49□□□□□ -1.53
HMGN1P16-201ENST00000508308 DEAF1O75398 565 aaPredicted RBP5.49□□□□□ -1.53
HMGN1P16-201ENST00000508308 UBL3O95164 117 aa5.49□□□□□ -1.53
HMGN1P16-201ENST00000508308 RAB36O95755 333 aa5.49□□□□□ -1.53
HMGN1P16-201ENST00000508308 QDPRP09417 244 aa5.49□□□□□ -1.53
HMGN1P16-201ENST00000508308 TSPAN19P0C672 248 aa5.49□□□□□ -1.53
HMGN1P16-201ENST00000508308 FAM157BP0CG42 384 aa5.49□□□□□ -1.53
HMGN1P16-201ENST00000508308 ZNF250P15622 560 aa5.49□□□□□ -1.53
HMGN1P16-201ENST00000508308 TNFRSF1BP20333 461 aa5.49□□□□□ -1.53
HMGN1P16-201ENST00000508308 ACHEP22303 614 aa5.49□□□□□ -1.53
HMGN1P16-201ENST00000508308 ZNF133P52736 654 aaPredicted RBP5.49□□□□□ -1.53
HMGN1P16-201ENST00000508308 NCALDP61601 193 aa5.49□□□□□ -1.53
HMGN1P16-201ENST00000508308 MRPS11P82912 194 aaKnown RBP5.49□□□□□ -1.53
HMGN1P16-201ENST00000508308 RBBP4Q09028 425 aa5.49□□□□□ -1.53
HMGN1P16-201ENST00000508308 HNRNPA0Q13151 305 aaKnown RBP5.49□□□□□ -1.53
HMGN1P16-201ENST00000508308 CYP51A1Q16850 503 aa5.49□□□□□ -1.53
HMGN1P16-201ENST00000508308 TRMT5Q32P41 509 aaKnown RBP5.49□□□□□ -1.53
HMGN1P16-201ENST00000508308 ALKBH6Q3KRA9 238 aa5.49□□□□□ -1.53
HMGN1P16-201ENST00000508308 DEF8Q6ZN54 512 aa5.49□□□□□ -1.53
HMGN1P16-201ENST00000508308 RINLQ6ZS11 566 aa5.49□□□□□ -1.53
HMGN1P16-201ENST00000508308 DHDDSQ86SQ9 333 aa5.49□□□□□ -1.53
HMGN1P16-201ENST00000508308 MEX3DQ86XN8 651 aaKnown RBP5.49□□□□□ -1.53
HMGN1P16-201ENST00000508308 NKAIN4Q8IVV8 208 aa5.49□□□□□ -1.53
HMGN1P16-201ENST00000508308 C11orf65Q8NCR3 313 aa5.49□□□□□ -1.53
HMGN1P16-201ENST00000508308 CPEB3Q8NE35 698 aaKnown RBP5.49□□□□□ -1.53
HMGN1P16-201ENST00000508308 SLC30A7Q8NEW0 376 aa5.49□□□□□ -1.53
HMGN1P16-201ENST00000508308 BHLHE22Q8NFJ8 381 aaPredicted RBP5.49□□□□□ -1.53
HMGN1P16-201ENST00000508308 SEMA6DQ8NFY4 1073 aa5.49□□□□□ -1.53
HMGN1P16-201ENST00000508308 OR4K5Q8NGD3 323 aa5.49□□□□□ -1.53
HMGN1P16-201ENST00000508308 VANGL1Q8TAA9 524 aaPredicted RBP5.49□□□□□ -1.53
HMGN1P16-201ENST00000508308 LRRC8CQ8TDW0 803 aa5.49□□□□□ -1.53
HMGN1P16-201ENST00000508308 STON2Q8WXE9 905 aa5.49□□□□□ -1.53
HMGN1P16-201ENST00000508308 RDH5Q92781 318 aa5.49□□□□□ -1.53
HMGN1P16-201ENST00000508308 THOC1Q96FV9 657 aaKnown RBP5.49□□□□□ -1.53
HMGN1P16-201ENST00000508308 SLC25A44Q96H78 314 aaPredicted RBP5.49□□□□□ -1.53
HMGN1P16-201ENST00000508308 ATP6V1G3Q96LB4 118 aa5.49□□□□□ -1.53
HMGN1P16-201ENST00000508308 ZNF347Q96SE7 839 aa5.49□□□□□ -1.53
HMGN1P16-201ENST00000508308 MS4A5Q9H3V2 200 aa5.49□□□□□ -1.53
HMGN1P16-201ENST00000508308 EVA1AQ9H8M9 152 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms