RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 DEFB110Q30KQ9 67 aa6.41□□□□□ -1.38
CLCN3-206ENST00000507875 RFX4Q33E94 735 aa6.41□□□□□ -1.38
CLCN3-206ENST00000507875 RBM48Q5RL73 367 aaKnown RBP6.41□□□□□ -1.38
CLCN3-206ENST00000507875 CEACAM20Q6UY09 585 aa6.41□□□□□ -1.38
CLCN3-206ENST00000507875 MDGA2Q7Z553 956 aa6.41□□□□□ -1.38
CLCN3-206ENST00000507875 VTCN1Q7Z7D3 282 aa6.41□□□□□ -1.38
CLCN3-206ENST00000507875 GALNT10Q86SR1 603 aa6.41□□□□□ -1.38
CLCN3-206ENST00000507875 PLCZ1Q86YW0 608 aa6.41□□□□□ -1.38
CLCN3-206ENST00000507875 OR2L13Q8N349 312 aa6.41□□□□□ -1.38
CLCN3-206ENST00000507875 PLPP5Q8NEB5 264 aa6.41□□□□□ -1.38
CLCN3-206ENST00000507875 OR51Q1Q8NH59 317 aa6.41□□□□□ -1.38
CLCN3-206ENST00000507875 CA5BP1Q8WTZ4 195 aa6.41□□□□□ -1.38
CLCN3-206ENST00000507875 MS4A4EQ96PG1 132 aa6.41□□□□□ -1.38
CLCN3-206ENST00000507875 SIGLEC11Q96RL6 698 aa6.41□□□□□ -1.38
CLCN3-206ENST00000507875 DCLRE1CQ96SD1 692 aaKnown RBP6.41□□□□□ -1.38
CLCN3-206ENST00000507875 STACQ99469 402 aa6.41□□□□□ -1.38
CLCN3-206ENST00000507875 MACROD1Q9BQ69 325 aa6.41□□□□□ -1.38
CLCN3-206ENST00000507875 ZNF416Q9BWM5 594 aa6.41□□□□□ -1.38
CLCN3-206ENST00000507875 RAB9BQ9NP90 201 aa6.41□□□□□ -1.38
CLCN3-206ENST00000507875 PNO1Q9NRX1 252 aaKnown RBP6.41□□□□□ -1.38
CLCN3-206ENST00000507875 VNN3Q9NY84 501 aa6.41□□□□□ -1.38
CLCN3-206ENST00000507875 NXT1Q9UKK6 140 aaKnown RBP6.41□□□□□ -1.38
CLCN3-206ENST00000507875 FAF1Q9UNN5 650 aaPredicted RBP6.41□□□□□ -1.38
CLCN3-206ENST00000507875 ABCG2Q9UNQ0 655 aa6.41□□□□□ -1.38
CLCN3-206ENST00000507875 ORC6Q9Y5N6 252 aa6.41□□□□□ -1.38
CLCN3-206ENST00000507875 MAU2Q9Y6X3 613 aa6.41□□□□□ -1.38
CLCN3-206ENST00000507875 SPAARA0A1B0GVQ0 90 aa6.4□□□□□ -1.38
CLCN3-206ENST00000507875 TMEM8BA6NDV4 472 aa6.4□□□□□ -1.38
CLCN3-206ENST00000507875 ATP6V1G2-DDX39BF2Z307 99 aa6.4□□□□□ -1.38
CLCN3-206ENST00000507875 H0Y8G0 127 aa6.4□□□□□ -1.38
CLCN3-206ENST00000507875 hCG_2039718K7EN88 272 aa6.4□□□□□ -1.38
CLCN3-206ENST00000507875 SGK494L7N484 410 aa6.4□□□□□ -1.38
CLCN3-206ENST00000507875 ZNF701M0R085 212 aaPredicted RBP6.4□□□□□ -1.38
CLCN3-206ENST00000507875 PRAMEF10O60809 474 aa6.4□□□□□ -1.38
CLCN3-206ENST00000507875 RDH16O75452 317 aa6.4□□□□□ -1.38
CLCN3-206ENST00000507875 SRMP19623 302 aa6.4□□□□□ -1.38
CLCN3-206ENST00000507875 SOAT1P35610 550 aa6.4□□□□□ -1.38
CLCN3-206ENST00000507875 ALDH3B1P43353 468 aa6.4□□□□□ -1.38
CLCN3-206ENST00000507875 CEBPDP49716 269 aaPredicted RBP6.4□□□□□ -1.38
CLCN3-206ENST00000507875 VLDLRP98155 873 aa6.4□□□□□ -1.38
CLCN3-206ENST00000507875 GALK2Q01415 458 aa6.4□□□□□ -1.38
CLCN3-206ENST00000507875 SPIBQ01892 262 aa6.4□□□□□ -1.38
CLCN3-206ENST00000507875 MOGAT2Q3SYC2 334 aa6.4□□□□□ -1.38
CLCN3-206ENST00000507875 B3GNTL1Q67FW5 361 aaPredicted RBP6.4□□□□□ -1.38
CLCN3-206ENST00000507875 ZNF773Q6PK81 442 aa6.4□□□□□ -1.38
CLCN3-206ENST00000507875 KCTD8Q6ZWB6 473 aa6.4□□□□□ -1.38
CLCN3-206ENST00000507875 CENPVQ7Z7K6 275 aaPredicted RBP6.4□□□□□ -1.38
CLCN3-206ENST00000507875 ERI1Q8IV48 349 aaKnown RBP6.4□□□□□ -1.38
CLCN3-206ENST00000507875 OR52L2PQ8NGH6 319 aa6.4□□□□□ -1.38
CLCN3-206ENST00000507875 OR4D6Q8NGJ1 314 aa6.4□□□□□ -1.38
CLCN3-206ENST00000507875 OR52J3Q8NH60 311 aa6.4□□□□□ -1.38
CLCN3-206ENST00000507875 OR14L1PQ8NHC6 308 aa6.4□□□□□ -1.38
CLCN3-206ENST00000507875 NR4A3Q92570 626 aa6.4□□□□□ -1.38
CLCN3-206ENST00000507875 MAL2Q969L2 176 aa6.4□□□□□ -1.38
CLCN3-206ENST00000507875 ANKRD9Q96BM1 317 aaPredicted RBP6.4□□□□□ -1.38
CLCN3-206ENST00000507875 KIRREL1Q96J84 757 aa6.4□□□□□ -1.38
CLCN3-206ENST00000507875 DDA1Q9BW61 102 aa6.4□□□□□ -1.38
CLCN3-206ENST00000507875 GABARAPL1Q9H0R8 117 aa6.4□□□□□ -1.38
CLCN3-206ENST00000507875 WDR54Q9H977 334 aa6.4□□□□□ -1.38
CLCN3-206ENST00000507875 BCL2L10Q9HD36 194 aa6.4□□□□□ -1.38
CLCN3-206ENST00000507875 Q9N2J8 555 aa6.4□□□□□ -1.38
CLCN3-206ENST00000507875 EXD2Q9NVH0 621 aa6.4□□□□□ -1.38
CLCN3-206ENST00000507875 TMEM9Q9P0T7 183 aa6.4□□□□□ -1.38
CLCN3-206ENST00000507875 P2RX2Q9UBL9 471 aa6.4□□□□□ -1.38
CLCN3-206ENST00000507875 GON4LQ3T8J9 2241 aa6.4□□□□□ -1.38
CLCN3-206ENST00000507875 NCOR2Q9Y618 2525 aa6.4□□□□□ -1.38
CLCN3-206ENST00000507875 CBY3A6NI87 242 aa6.4□□□□□ -1.39
CLCN3-206ENST00000507875 WWP2O00308 870 aa6.4□□□□□ -1.39
CLCN3-206ENST00000507875 PRYO14603 147 aa6.4□□□□□ -1.39
CLCN3-206ENST00000507875 ABCD4O14678 606 aa6.4□□□□□ -1.39
CLCN3-206ENST00000507875 NUPL2O15504 423 aaKnown RBP6.4□□□□□ -1.39
CLCN3-206ENST00000507875 SUV39H1O43463 412 aa6.4□□□□□ -1.39
CLCN3-206ENST00000507875 HCRTR1O43613 425 aa6.4□□□□□ -1.39
CLCN3-206ENST00000507875 TLX2O43763 284 aaPredicted RBP6.4□□□□□ -1.39
CLCN3-206ENST00000507875 SNAPINO95295 136 aa6.4□□□□□ -1.39
CLCN3-206ENST00000507875 HEXAP06865 529 aa6.4□□□□□ -1.39
CLCN3-206ENST00000507875 H2AFB2P0C5Z0 115 aa6.4□□□□□ -1.39
CLCN3-206ENST00000507875 MATN1P21941 496 aa6.4□□□□□ -1.39
CLCN3-206ENST00000507875 CRHBPP24387 322 aa6.4□□□□□ -1.39
CLCN3-206ENST00000507875 EEF1B2P24534 225 aaKnown RBP6.4□□□□□ -1.39
CLCN3-206ENST00000507875 IGFBP5P24593 272 aa6.4□□□□□ -1.39
CLCN3-206ENST00000507875 CRATP43155 626 aa6.4□□□□□ -1.39
CLCN3-206ENST00000507875 CRYBA2P53672 197 aa6.4□□□□□ -1.39
CLCN3-206ENST00000507875 ISL1P61371 349 aa6.4□□□□□ -1.39
CLCN3-206ENST00000507875 PSG6Q00889 435 aa6.4□□□□□ -1.39
CLCN3-206ENST00000507875 STX4Q12846 297 aa6.4□□□□□ -1.39
CLCN3-206ENST00000507875 IL18R1Q13478 541 aa6.4□□□□□ -1.39
CLCN3-206ENST00000507875 ST3GAL2Q16842 350 aa6.4□□□□□ -1.39
CLCN3-206ENST00000507875 C6orf141Q5SZD1 244 aa6.4□□□□□ -1.39
CLCN3-206ENST00000507875 FHL5Q5TD97 284 aa6.4□□□□□ -1.39
CLCN3-206ENST00000507875 ZNF691Q5VV52 312 aa6.4□□□□□ -1.39
CLCN3-206ENST00000507875 REEP3Q6NUK4 255 aa6.4□□□□□ -1.39
CLCN3-206ENST00000507875 NHLRC1Q6VVB1 395 aa6.4□□□□□ -1.39
CLCN3-206ENST00000507875 CDRT4Q8N9R6 151 aa6.4□□□□□ -1.39
CLCN3-206ENST00000507875 CLEC1AQ8NC01 280 aa6.4□□□□□ -1.39
CLCN3-206ENST00000507875 ISOC1Q96CN7 298 aa6.4□□□□□ -1.39
CLCN3-206ENST00000507875 MBD6Q96DN6 1003 aa6.4□□□□□ -1.39
CLCN3-206ENST00000507875 FBXO17Q96EF6 278 aa6.4□□□□□ -1.39
CLCN3-206ENST00000507875 RTN4RQ9BZR6 473 aa6.4□□□□□ -1.39
CLCN3-206ENST00000507875 HIPK2Q9H2X6 1198 aa6.4□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms