RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 P2RY8Q86VZ1 359 aa17.71■□□□□ 0.43
USP53-203ENST00000507597 CCDC36Q8IYA8 594 aa17.71■□□□□ 0.43
USP53-203ENST00000507597 SYT14Q8NB59 555 aa17.71■□□□□ 0.43
USP53-203ENST00000507597 C1orf162Q8NEQ5 155 aaPredicted RBP17.71■□□□□ 0.43
USP53-203ENST00000507597 HDAC2Q92769 488 aaKnown RBP17.71■□□□□ 0.43
USP53-203ENST00000507597 RASD2Q96D21 266 aa17.71■□□□□ 0.43
USP53-203ENST00000507597 PLA2G12AQ9BZM1 189 aa17.71■□□□□ 0.43
USP53-203ENST00000507597 RIBC2Q9H4K1 309 aa17.71■□□□□ 0.43
USP53-203ENST00000507597 SLC25A19Q9HC21 320 aa17.71■□□□□ 0.43
USP53-203ENST00000507597 CRLF2Q9HC73 371 aa17.71■□□□□ 0.43
USP53-203ENST00000507597 GPR35Q9HC97 309 aa17.71■□□□□ 0.43
USP53-203ENST00000507597 GALNT8Q9NY28 637 aa17.71■□□□□ 0.43
USP53-203ENST00000507597 TMEFF2Q9UIK5 374 aaPredicted RBP17.71■□□□□ 0.43
USP53-203ENST00000507597 NCOA6Q14686 2063 aaPredicted RBP17.71■□□□□ 0.43
USP53-203ENST00000507597 DHHO43323 396 aa17.7■□□□□ 0.42
USP53-203ENST00000507597 TP53P04637 393 aaPredicted RBP17.7■□□□□ 0.42
USP53-203ENST00000507597 PTGES3Q15185 160 aaKnown RBP17.7■□□□□ 0.42
USP53-203ENST00000507597 HIST3H3Q16695 136 aa17.7■□□□□ 0.42
USP53-203ENST00000507597 MESTQ5EB52 335 aa17.7■□□□□ 0.42
USP53-203ENST00000507597 LEG1Q6P5S2 330 aa17.7■□□□□ 0.42
USP53-203ENST00000507597 CXorf67Q86X51 503 aaPredicted RBP17.7■□□□□ 0.42
USP53-203ENST00000507597 C17orf78Q8N4C9 275 aa17.7■□□□□ 0.42
USP53-203ENST00000507597 OR52E2Q8NGJ4 325 aa17.7■□□□□ 0.42
USP53-203ENST00000507597 OR8D4Q8NGM9 314 aa17.7■□□□□ 0.42
USP53-203ENST00000507597 MCHR2Q969V1 340 aa17.7■□□□□ 0.42
USP53-203ENST00000507597 ALKBH3Q96Q83 286 aaPredicted RBP17.7■□□□□ 0.42
USP53-203ENST00000507597 GABARAPL3Q9BY60 117 aa17.7■□□□□ 0.42
USP53-203ENST00000507597 MOV10Q9HCE1 1003 aaKnown RBP17.7■□□□□ 0.42
USP53-203ENST00000507597 VSX1Q9NZR4 365 aaPredicted RBP17.7■□□□□ 0.42
USP53-203ENST00000507597 SLC22A23A1A5C7 686 aa17.69■□□□□ 0.42
USP53-203ENST00000507597 ZNF99A8MXY4 864 aaPredicted RBP17.69■□□□□ 0.42
USP53-203ENST00000507597 FARS2O95363 451 aaKnown RBP17.69■□□□□ 0.42
USP53-203ENST00000507597 ATP6V1G2O95670 118 aa17.69■□□□□ 0.42
USP53-203ENST00000507597 HIST1H1CP16403 213 aaKnown RBP17.69■□□□□ 0.42
USP53-203ENST00000507597 NPR2P20594 1047 aa17.69■□□□□ 0.42
USP53-203ENST00000507597 COX5AP20674 150 aa17.69■□□□□ 0.42
USP53-203ENST00000507597 CENPAP49450 140 aa17.69■□□□□ 0.42
USP53-203ENST00000507597 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.69■□□□□ 0.42
USP53-203ENST00000507597 SRSF1Q07955 248 aaKnown RBP eCLIP17.69■□□□□ 0.42
USP53-203ENST00000507597 LRRC36Q1X8D7 754 aa17.69■□□□□ 0.42
USP53-203ENST00000507597 CEACAM16Q2WEN9 425 aa17.69■□□□□ 0.42
USP53-203ENST00000507597 NRN1LQ496H8 165 aa17.69■□□□□ 0.42
USP53-203ENST00000507597 SLC35F1Q5T1Q4 408 aa17.69■□□□□ 0.42
USP53-203ENST00000507597 OGFRL1Q5TC84 451 aaPredicted RBP17.69■□□□□ 0.42
USP53-203ENST00000507597 KLHL24Q6TFL4 600 aa17.69■□□□□ 0.42
USP53-203ENST00000507597 BHLHA15Q7RTS1 189 aaPredicted RBP17.69■□□□□ 0.42
USP53-203ENST00000507597 ZNF555Q8NEP9 628 aa17.69■□□□□ 0.42
USP53-203ENST00000507597 OR4K13Q8NH42 304 aa17.69■□□□□ 0.42
USP53-203ENST00000507597 RASSF4Q9H2L5 321 aa17.69■□□□□ 0.42
USP53-203ENST00000507597 KCNN2Q9H2S1 579 aa17.69■□□□□ 0.42
USP53-203ENST00000507597 CMC2Q9NRP2 79 aa17.69■□□□□ 0.42
USP53-203ENST00000507597 SMPD3Q9NY59 655 aaPredicted RBP17.69■□□□□ 0.42
USP53-203ENST00000507597 HIVEP3Q5T1R4 2406 aa17.69■□□□□ 0.42
USP53-203ENST00000507597 MITFO75030 526 aaPredicted RBP17.68■□□□□ 0.42
USP53-203ENST00000507597 KHDRBS3O75525 346 aaKnown RBP17.68■□□□□ 0.42
USP53-203ENST00000507597 IGFBP1P08833 259 aaPredicted RBP17.68■□□□□ 0.42
USP53-203ENST00000507597 IGHV1-2P23083 117 aa17.68■□□□□ 0.42
USP53-203ENST00000507597 UGT2B10P36537 528 aa17.68■□□□□ 0.42
USP53-203ENST00000507597 ZNF133P52736 654 aaPredicted RBP17.68■□□□□ 0.42
USP53-203ENST00000507597 CDC42P60953 191 aa17.68■□□□□ 0.42
USP53-203ENST00000507597 RUNX1T1Q06455 604 aa17.68■□□□□ 0.42
USP53-203ENST00000507597 FAM27E3Q08E93 113 aa17.68■□□□□ 0.42
USP53-203ENST00000507597 SNAPC1Q16533 368 aa17.68■□□□□ 0.42
USP53-203ENST00000507597 C10orf128Q5T292 105 aa17.68■□□□□ 0.42
USP53-203ENST00000507597 LPCAT4Q643R3 524 aa17.68■□□□□ 0.42
USP53-203ENST00000507597 ANKRD16Q6P6B7 361 aa17.68■□□□□ 0.42
USP53-203ENST00000507597 STAC2Q6ZMT1 411 aa17.68■□□□□ 0.42
USP53-203ENST00000507597 INTS1Q8N201 2190 aaKnown RBP17.68■□□□□ 0.42
USP53-203ENST00000507597 GALNT4Q8N4A0 578 aa17.68■□□□□ 0.42
USP53-203ENST00000507597 ZNF433Q8N7K0 673 aaPredicted RBP17.68■□□□□ 0.42
USP53-203ENST00000507597 OR2T4Q8NH00 348 aa17.68■□□□□ 0.42
USP53-203ENST00000507597 MUCL1Q96DR8 90 aa17.68■□□□□ 0.42
USP53-203ENST00000507597 FOXB1Q99853 325 aa17.68■□□□□ 0.42
USP53-203ENST00000507597 OBP2BQ9NPH6 170 aa17.68■□□□□ 0.42
USP53-203ENST00000507597 FKBP7Q9Y680 259 aa17.68■□□□□ 0.42
USP53-203ENST00000507597 DIDO1Q9BTC0 2240 aaKnown RBP17.68■□□□□ 0.42
USP53-203ENST00000507597 ZAR1LA6NP61 321 aa17.67■□□□□ 0.42
USP53-203ENST00000507597 PRSS44E7EML9 344 aa17.67■□□□□ 0.42
USP53-203ENST00000507597 LYZL6O75951 148 aa17.67■□□□□ 0.42
USP53-203ENST00000507597 WNT11O96014 354 aa17.67■□□□□ 0.42
USP53-203ENST00000507597 PEX2P28328 305 aa17.67■□□□□ 0.42
USP53-203ENST00000507597 CDKN2AP42771 156 aaKnown RBP17.67■□□□□ 0.42
USP53-203ENST00000507597 BLVRAP53004 296 aa17.67■□□□□ 0.42
USP53-203ENST00000507597 UBE2NP61088 152 aaKnown RBP17.67■□□□□ 0.42
USP53-203ENST00000507597 LGALS3BPQ08380 585 aa17.67■□□□□ 0.42
USP53-203ENST00000507597 ANKRD34AQ69YU3 496 aa17.67■□□□□ 0.42
USP53-203ENST00000507597 LRFN4Q6PJG9 635 aa17.67■□□□□ 0.42
USP53-203ENST00000507597 DPPA2Q7Z7J5 298 aa17.67■□□□□ 0.42
USP53-203ENST00000507597 SDR9C7Q8NEX9 313 aa17.67■□□□□ 0.42
USP53-203ENST00000507597 OR4Q3Q8NH05 313 aa17.67■□□□□ 0.42
USP53-203ENST00000507597 NANOS1Q8WY41 292 aaKnown RBP17.67■□□□□ 0.42
USP53-203ENST00000507597 HSD17B8Q92506 261 aa17.67■□□□□ 0.42
USP53-203ENST00000507597 BOD1Q96IK1 185 aa17.67■□□□□ 0.42
USP53-203ENST00000507597 MUS81Q96NY9 551 aa17.67■□□□□ 0.42
USP53-203ENST00000507597 NMNAT3Q96T66 252 aa17.67■□□□□ 0.42
USP53-203ENST00000507597 SLC29A1Q99808 456 aa17.67■□□□□ 0.42
USP53-203ENST00000507597 FN3KQ9H479 309 aa17.67■□□□□ 0.42
USP53-203ENST00000507597 NGBQ9NPG2 151 aa17.67■□□□□ 0.42
USP53-203ENST00000507597 TVP23BQ9NYZ1 205 aa17.67■□□□□ 0.42
USP53-203ENST00000507597 H2AFY2Q9P0M6 372 aaPredicted RBP17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms