RNA–Protein interactions for RNA: ENST00000507401.2

SCN1A-207, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 3

Gene SCN1A, Length 711 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-207ENST00000507401 MED17Q9NVC6 651 aa7.17□□□□□ -1.26
SCN1A-207ENST00000507401 ADPRHL2Q9NX46 363 aa7.17□□□□□ -1.26
SCN1A-207ENST00000507401 ST6GALNAC2Q9UJ37 374 aa7.17□□□□□ -1.26
SCN1A-207ENST00000507401 RPS6KA6Q9UK32 745 aa7.17□□□□□ -1.26
SCN1A-207ENST00000507401 ICAM5Q9UMF0 924 aa7.17□□□□□ -1.26
SCN1A-207ENST00000507401 ING4Q9UNL4 249 aa7.17□□□□□ -1.26
SCN1A-207ENST00000507401 VDAC3Q9Y277 283 aa7.17□□□□□ -1.26
SCN1A-207ENST00000507401 FKBP7Q9Y680 259 aa7.17□□□□□ -1.26
SCN1A-207ENST00000507401 SESN1Q9Y6P5 492 aa7.17□□□□□ -1.26
SCN1A-207ENST00000507401 GJE1A6NN92 205 aa7.16□□□□□ -1.26
SCN1A-207ENST00000507401 LEUTXA8MZ59 168 aa7.16□□□□□ -1.26
SCN1A-207ENST00000507401 FAM220BPB1ANY3 271 aa7.16□□□□□ -1.26
SCN1A-207ENST00000507401 E9PQ18 207 aa7.16□□□□□ -1.26
SCN1A-207ENST00000507401 EIF1AYO14602 144 aaKnown RBP7.16□□□□□ -1.26
SCN1A-207ENST00000507401 ANKRD28O15084 1053 aa7.16□□□□□ -1.26
SCN1A-207ENST00000507401 SULT1B1O43704 296 aa7.16□□□□□ -1.26
SCN1A-207ENST00000507401 ORC5O43913 435 aa7.16□□□□□ -1.26
SCN1A-207ENST00000507401 EIF4E2O60573 245 aaKnown RBP7.16□□□□□ -1.26
SCN1A-207ENST00000507401 SLC43A1O75387 559 aa7.16□□□□□ -1.26
SCN1A-207ENST00000507401 STX11O75558 287 aa7.16□□□□□ -1.26
SCN1A-207ENST00000507401 HLA-DQB1P01920 261 aa7.16□□□□□ -1.26
SCN1A-207ENST00000507401 IL6P05231 212 aa7.16□□□□□ -1.26
SCN1A-207ENST00000507401 DNASE1P24855 282 aa7.16□□□□□ -1.26
SCN1A-207ENST00000507401 RORCP51449 518 aa7.16□□□□□ -1.26
SCN1A-207ENST00000507401 P2RX1P51575 399 aa7.16□□□□□ -1.26
SCN1A-207ENST00000507401 BTG1P62324 171 aa7.16□□□□□ -1.26
SCN1A-207ENST00000507401 LRRC74AQ0VAA2 488 aa7.16□□□□□ -1.26
SCN1A-207ENST00000507401 PON3Q15166 354 aa7.16□□□□□ -1.26
SCN1A-207ENST00000507401 ARHGAP11BQ3KRB8 267 aa7.16□□□□□ -1.26
SCN1A-207ENST00000507401 CLLU1Q5K131 121 aa7.16□□□□□ -1.26
SCN1A-207ENST00000507401 DCST2Q5T1A1 773 aa7.16□□□□□ -1.26
SCN1A-207ENST00000507401 TMEM236Q5W0B7 351 aa7.16□□□□□ -1.26
SCN1A-207ENST00000507401 LAIR2Q6ISS4 152 aa7.16□□□□□ -1.26
SCN1A-207ENST00000507401 VWA1Q6PCB0 445 aa7.16□□□□□ -1.26
SCN1A-207ENST00000507401 ZNF474Q6S9Z5 364 aaPredicted RBP7.16□□□□□ -1.26
SCN1A-207ENST00000507401 PLET1Q6UQ28 207 aa7.16□□□□□ -1.26
SCN1A-207ENST00000507401 PLXDC2Q6UX71 529 aa7.16□□□□□ -1.26
SCN1A-207ENST00000507401 GALNT10Q86SR1 603 aa7.16□□□□□ -1.26
SCN1A-207ENST00000507401 ADGRG3Q86Y34 549 aa7.16□□□□□ -1.26
SCN1A-207ENST00000507401 OR8H2Q8N162 312 aa7.16□□□□□ -1.26
SCN1A-207ENST00000507401 CNEP1R1Q8N9A8 125 aa7.16□□□□□ -1.26
SCN1A-207ENST00000507401 DUSP18Q8NEJ0 188 aa7.16□□□□□ -1.26
SCN1A-207ENST00000507401 OR5T2Q8NGG2 359 aa7.16□□□□□ -1.26
SCN1A-207ENST00000507401 OR9Q1Q8NGQ5 310 aa7.16□□□□□ -1.26
SCN1A-207ENST00000507401 OR9I1Q8NGQ6 314 aa7.16□□□□□ -1.26
SCN1A-207ENST00000507401 FBXO30Q8TB52 745 aa7.16□□□□□ -1.26
SCN1A-207ENST00000507401 ENKURQ8TC29 256 aa7.16□□□□□ -1.26
SCN1A-207ENST00000507401 PHOSPHO1Q8TCT1 267 aa7.16□□□□□ -1.26
SCN1A-207ENST00000507401 GPR119Q8TDV5 335 aa7.16□□□□□ -1.26
SCN1A-207ENST00000507401 GTF2H4Q92759 462 aa7.16□□□□□ -1.26
SCN1A-207ENST00000507401 ARSGQ96EG1 525 aa7.16□□□□□ -1.26
SCN1A-207ENST00000507401 GMPPAQ96IJ6 420 aaPredicted RBP7.16□□□□□ -1.26
SCN1A-207ENST00000507401 MAP6Q96JE9 813 aa7.16□□□□□ -1.26
SCN1A-207ENST00000507401 OR7D2Q96RA2 312 aa7.16□□□□□ -1.26
SCN1A-207ENST00000507401 SDF2Q99470 211 aa7.16□□□□□ -1.26
SCN1A-207ENST00000507401 COPS4Q9BT78 406 aa7.16□□□□□ -1.26
SCN1A-207ENST00000507401 GABARAPL3Q9BY60 117 aa7.16□□□□□ -1.26
SCN1A-207ENST00000507401 PRRG4Q9BZD6 226 aa7.16□□□□□ -1.26
SCN1A-207ENST00000507401 DPY30Q9C005 99 aa7.16□□□□□ -1.26
SCN1A-207ENST00000507401 MRPL18Q9H0U6 180 aaKnown RBP7.16□□□□□ -1.26
SCN1A-207ENST00000507401 PLEKHF2Q9H8W4 249 aa7.16□□□□□ -1.26
SCN1A-207ENST00000507401 GP6Q9HCN6 339 aa7.16□□□□□ -1.26
SCN1A-207ENST00000507401 FANCFQ9NPI8 374 aa7.16□□□□□ -1.26
SCN1A-207ENST00000507401 TIGARQ9NQ88 270 aa7.16□□□□□ -1.26
SCN1A-207ENST00000507401 POLE4Q9NR33 117 aa7.16□□□□□ -1.26
SCN1A-207ENST00000507401 EXD2Q9NVH0 621 aa7.16□□□□□ -1.26
SCN1A-207ENST00000507401 ZNF226Q9NYT6 803 aa7.16□□□□□ -1.26
SCN1A-207ENST00000507401 KIF17Q9P2E2 1029 aa7.16□□□□□ -1.26
SCN1A-207ENST00000507401 ERVK-18Q9QC07 812 aa7.16□□□□□ -1.26
SCN1A-207ENST00000507401 TMEFF2Q9UIK5 374 aaPredicted RBP7.16□□□□□ -1.26
SCN1A-207ENST00000507401 MCTS1Q9ULC4 181 aaKnown RBP7.16□□□□□ -1.26
SCN1A-207ENST00000507401 NOSIPQ9Y314 301 aaKnown RBP7.16□□□□□ -1.26
SCN1A-207ENST00000507401 ABCA4P78363 2273 aa7.16□□□□□ -1.26
SCN1A-207ENST00000507401 MED13LQ71F56 2210 aa7.15□□□□□ -1.26
SCN1A-207ENST00000507401 A0A0J9YW62 118 aa7.15□□□□□ -1.26
SCN1A-207ENST00000507401 A0A1B0GW55 424 aa7.15□□□□□ -1.26
SCN1A-207ENST00000507401 A0A1W2PRG6 482 aa7.15□□□□□ -1.26
SCN1A-207ENST00000507401 KRBOX1C9JBD0 128 aa7.15□□□□□ -1.26
SCN1A-207ENST00000507401 C16orf97H3BN30 126 aa7.15□□□□□ -1.26
SCN1A-207ENST00000507401 GTPBP1O00178 669 aaKnown RBP7.15□□□□□ -1.26
SCN1A-207ENST00000507401 ETV2O00321 342 aaPredicted RBP7.15□□□□□ -1.26
SCN1A-207ENST00000507401 ZNF264O43296 627 aa7.15□□□□□ -1.26
SCN1A-207ENST00000507401 PEX14O75381 377 aa7.15□□□□□ -1.26
SCN1A-207ENST00000507401 SLC22A5O76082 557 aa7.15□□□□□ -1.26
SCN1A-207ENST00000507401 AQP8O94778 261 aa7.15□□□□□ -1.26
SCN1A-207ENST00000507401 SYNGR4O95473 234 aa7.15□□□□□ -1.26
SCN1A-207ENST00000507401 HRGP04196 525 aa7.15□□□□□ -1.26
SCN1A-207ENST00000507401 RPLP1P05386 114 aaKnown RBP7.15□□□□□ -1.26
SCN1A-207ENST00000507401 CDK1P06493 297 aa7.15□□□□□ -1.26
SCN1A-207ENST00000507401 DUX4L2P0CJ85 424 aa7.15□□□□□ -1.26
SCN1A-207ENST00000507401 DUX4L3P0CJ86 424 aa7.15□□□□□ -1.26
SCN1A-207ENST00000507401 DUX4L4P0CJ87 422 aa7.15□□□□□ -1.26
SCN1A-207ENST00000507401 DUX4L5P0CJ88 424 aa7.15□□□□□ -1.26
SCN1A-207ENST00000507401 DUX4L6P0CJ89 424 aa7.15□□□□□ -1.26
SCN1A-207ENST00000507401 DUX4L7P0CJ90 424 aa7.15□□□□□ -1.26
SCN1A-207ENST00000507401 GAAP10253 952 aa7.15□□□□□ -1.26
SCN1A-207ENST00000507401 PSKH1P11801 424 aa7.15□□□□□ -1.26
SCN1A-207ENST00000507401 PIPP12273 146 aaPredicted RBP7.15□□□□□ -1.26
SCN1A-207ENST00000507401 PPP3CBP16298 524 aa7.15□□□□□ -1.26
SCN1A-207ENST00000507401 EPHA1P21709 976 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms