RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 CNOT9Q92600 299 aaKnown RBP5.95□□□□□ -1.46
VCAN-207ENST00000507162 RCC1LQ96I51 464 aaKnown RBP5.95□□□□□ -1.46
VCAN-207ENST00000507162 C3orf30Q96M34 536 aa5.95□□□□□ -1.46
VCAN-207ENST00000507162 WDFY2Q96P53 400 aa5.95□□□□□ -1.46
VCAN-207ENST00000507162 OXGR1Q96P68 337 aa5.95□□□□□ -1.46
VCAN-207ENST00000507162 OR2M2Q96R28 347 aa5.95□□□□□ -1.46
VCAN-207ENST00000507162 FOXB1Q99853 325 aa5.95□□□□□ -1.46
VCAN-207ENST00000507162 SEMA6AQ9H2E6 1030 aa5.95□□□□□ -1.46
VCAN-207ENST00000507162 LRMDAQ9H2I8 198 aa5.95□□□□□ -1.46
VCAN-207ENST00000507162 REEP4Q9H6H4 257 aa5.95□□□□□ -1.46
VCAN-207ENST00000507162 B3GAT2Q9NPZ5 323 aa5.95□□□□□ -1.46
VCAN-207ENST00000507162 LZTFL1Q9NQ48 299 aa5.95□□□□□ -1.46
VCAN-207ENST00000507162 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.95□□□□□ -1.46
VCAN-207ENST00000507162 GPATCH2Q9NW75 528 aa5.95□□□□□ -1.46
VCAN-207ENST00000507162 SLC17A7Q9P2U7 560 aa5.95□□□□□ -1.46
VCAN-207ENST00000507162 CLN8Q9UBY8 286 aa5.95□□□□□ -1.46
VCAN-207ENST00000507162 BAIAP2L1Q9UHR4 511 aa5.95□□□□□ -1.46
VCAN-207ENST00000507162 PPP1R3CQ9UQK1 317 aa5.95□□□□□ -1.46
VCAN-207ENST00000507162 A0A1W2PRD5 423 aa5.94□□□□□ -1.46
VCAN-207ENST00000507162 A0A1W2PRF3 423 aa5.94□□□□□ -1.46
VCAN-207ENST00000507162 A0A1W2PRM7 423 aa5.94□□□□□ -1.46
VCAN-207ENST00000507162 ADARB2-AS1A8MUL3 147 aa5.94□□□□□ -1.46
VCAN-207ENST00000507162 C22orf46C9J442 243 aa5.94□□□□□ -1.46
VCAN-207ENST00000507162 E7ESA3 106 aa5.94□□□□□ -1.46
VCAN-207ENST00000507162 TMEM178BH3BS89 294 aa5.94□□□□□ -1.46
VCAN-207ENST00000507162 FBP1P09467 338 aa5.94□□□□□ -1.46
VCAN-207ENST00000507162 CCDC159P0C7I6 412 aa5.94□□□□□ -1.46
VCAN-207ENST00000507162 TNFRSF1AP19438 455 aa5.94□□□□□ -1.46
VCAN-207ENST00000507162 MATN1P21941 496 aa5.94□□□□□ -1.46
VCAN-207ENST00000507162 TNFSF4P23510 183 aa5.94□□□□□ -1.46
VCAN-207ENST00000507162 LIPAP38571 399 aa5.94□□□□□ -1.46
VCAN-207ENST00000507162 MAP2K6P52564 334 aa5.94□□□□□ -1.46
VCAN-207ENST00000507162 LY6EQ16553 131 aa5.94□□□□□ -1.46
VCAN-207ENST00000507162 COX20Q5RI15 118 aa5.94□□□□□ -1.46
VCAN-207ENST00000507162 C1orf140Q5VVS0 124 aa5.94□□□□□ -1.46
VCAN-207ENST00000507162 METTL11BQ5VVY1 283 aa5.94□□□□□ -1.46
VCAN-207ENST00000507162 WDR25Q64LD2 544 aaPredicted RBP5.94□□□□□ -1.46
VCAN-207ENST00000507162 C16orf62Q7Z3J2 963 aa5.94□□□□□ -1.46
VCAN-207ENST00000507162 CALHM3Q86XJ0 350 aa5.94□□□□□ -1.46
VCAN-207ENST00000507162 VRK2Q86Y07 508 aa5.94□□□□□ -1.46
VCAN-207ENST00000507162 PTOV1Q86YD1 416 aa5.94□□□□□ -1.46
VCAN-207ENST00000507162 C20orf196Q8IYI0 205 aa5.94□□□□□ -1.46
VCAN-207ENST00000507162 FAM71CQ8NEG0 241 aa5.94□□□□□ -1.46
VCAN-207ENST00000507162 OR2Z1Q8NG97 314 aa5.94□□□□□ -1.46
VCAN-207ENST00000507162 OR6N1Q8NGY5 312 aa5.94□□□□□ -1.46
VCAN-207ENST00000507162 OR5AK3PQ8NH89 298 aa5.94□□□□□ -1.46
VCAN-207ENST00000507162 FAM76AQ8TAV0 307 aa5.94□□□□□ -1.46
VCAN-207ENST00000507162 ITLN1Q8WWA0 313 aa5.94□□□□□ -1.46
VCAN-207ENST00000507162 NSMAFQ92636 917 aa5.94□□□□□ -1.46
VCAN-207ENST00000507162 PBKQ96KB5 322 aa5.94□□□□□ -1.46
VCAN-207ENST00000507162 SAMD8Q96LT4 415 aa5.94□□□□□ -1.46
VCAN-207ENST00000507162 DMRTB1Q96MA1 342 aa5.94□□□□□ -1.46
VCAN-207ENST00000507162 TSSK3Q96PN8 268 aa5.94□□□□□ -1.46
VCAN-207ENST00000507162 SH3GL3Q99963 347 aa5.94□□□□□ -1.46
VCAN-207ENST00000507162 TMEM246Q9BRR3 403 aa5.94□□□□□ -1.46
VCAN-207ENST00000507162 EMC6Q9BV81 110 aa5.94□□□□□ -1.46
VCAN-207ENST00000507162 SLC19A3Q9BZV2 496 aa5.94□□□□□ -1.46
VCAN-207ENST00000507162 CYSLTR2Q9NS75 346 aa5.94□□□□□ -1.46
VCAN-207ENST00000507162 STARD9Q9P2P6 4700 aa5.93□□□□□ -1.46
VCAN-207ENST00000507162 IQCMA0A1B0GVH7 501 aa5.93□□□□□ -1.46
VCAN-207ENST00000507162 PRAMEF27A3QJZ7 478 aa5.93□□□□□ -1.46
VCAN-207ENST00000507162 A8MVM7 634 aa5.93□□□□□ -1.46
VCAN-207ENST00000507162 PGRMC1O00264 195 aaKnown RBP5.93□□□□□ -1.46
VCAN-207ENST00000507162 CFLARO15519 480 aa5.93□□□□□ -1.46
VCAN-207ENST00000507162 AKAP8O43823 692 aaKnown RBP5.93□□□□□ -1.46
VCAN-207ENST00000507162 PEX14O75381 377 aa5.93□□□□□ -1.46
VCAN-207ENST00000507162 JTBO76095 146 aa5.93□□□□□ -1.46
VCAN-207ENST00000507162 DUS4LO95620 317 aaKnown RBP5.93□□□□□ -1.46
VCAN-207ENST00000507162 CYB5R3P00387 301 aaPredicted RBP5.93□□□□□ -1.46
VCAN-207ENST00000507162 PAHP00439 452 aa5.93□□□□□ -1.46
VCAN-207ENST00000507162 PTHP01270 115 aa5.93□□□□□ -1.46
VCAN-207ENST00000507162 OPN1SWP03999 348 aa5.93□□□□□ -1.46
VCAN-207ENST00000507162 CD55P08174 381 aa5.93□□□□□ -1.46
VCAN-207ENST00000507162 ADH4P08319 380 aa5.93□□□□□ -1.46
VCAN-207ENST00000507162 TFPTP0C1Z6 253 aa5.93□□□□□ -1.46
VCAN-207ENST00000507162 PNMTP11086 282 aa5.93□□□□□ -1.46
VCAN-207ENST00000507162 MMP9P14780 707 aa5.93□□□□□ -1.46
VCAN-207ENST00000507162 CPT2P23786 658 aa5.93□□□□□ -1.46
VCAN-207ENST00000507162 EPHA3P29320 983 aa5.93□□□□□ -1.46
VCAN-207ENST00000507162 FRKP42685 505 aaPredicted RBP5.93□□□□□ -1.46
VCAN-207ENST00000507162 CRATP43155 626 aa5.93□□□□□ -1.46
VCAN-207ENST00000507162 ARF6P62330 175 aa5.93□□□□□ -1.46
VCAN-207ENST00000507162 PLP2Q04941 152 aa5.93□□□□□ -1.46
VCAN-207ENST00000507162 UAP1Q16222 522 aaPredicted RBP5.93□□□□□ -1.46
VCAN-207ENST00000507162 SMU1Q2TAY7 513 aa5.93□□□□□ -1.46
VCAN-207ENST00000507162 UNC50Q53HI1 259 aa5.93□□□□□ -1.46
VCAN-207ENST00000507162 TMEM255AQ5JRV8 349 aa5.93□□□□□ -1.46
VCAN-207ENST00000507162 ATG16L1Q676U5 607 aa5.93□□□□□ -1.46
VCAN-207ENST00000507162 TMEM53Q6P2H8 277 aa5.93□□□□□ -1.46
VCAN-207ENST00000507162 LYPD2Q6UXB3 125 aa5.93□□□□□ -1.46
VCAN-207ENST00000507162 UNQ9370/PRO34162Q6UXP9 181 aa5.93□□□□□ -1.46
VCAN-207ENST00000507162 COMTD1Q86VU5 262 aa5.93□□□□□ -1.46
VCAN-207ENST00000507162 SNX32Q86XE0 403 aa5.93□□□□□ -1.46
VCAN-207ENST00000507162 CADM2Q8N3J6 435 aa5.93□□□□□ -1.46
VCAN-207ENST00000507162 SCAIQ8N9R8 606 aa5.93□□□□□ -1.46
VCAN-207ENST00000507162 ZNF511Q8NB15 262 aa5.93□□□□□ -1.46
VCAN-207ENST00000507162 PAPD5Q8NDF8 572 aaKnown RBP5.93□□□□□ -1.46
VCAN-207ENST00000507162 OR5R1Q8NH85 324 aa5.93□□□□□ -1.46
VCAN-207ENST00000507162 SLC25A40Q8TBP6 338 aa5.93□□□□□ -1.46
VCAN-207ENST00000507162 XAGE5Q8WWM1 108 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms