RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 TREM1Q9NP99 234 aa14.48□□□□□ -0.09
SCLT1-208ENST00000506368 NIT2Q9NQR4 276 aa14.48□□□□□ -0.09
SCLT1-208ENST00000506368 DUSP22Q9NRW4 184 aa14.48□□□□□ -0.09
SCLT1-208ENST00000506368 SLC2A8Q9NY64 477 aa14.48□□□□□ -0.09
SCLT1-208ENST00000506368 NOP16Q9Y3C1 178 aaKnown RBP14.48□□□□□ -0.09
SCLT1-208ENST00000506368 CD74P04233 296 aa14.47□□□□□ -0.09
SCLT1-208ENST00000506368 ABCD3P28288 659 aa14.47□□□□□ -0.09
SCLT1-208ENST00000506368 NPBWR1P48145 328 aa14.47□□□□□ -0.09
SCLT1-208ENST00000506368 NANOS3P60323 173 aaKnown RBP14.47□□□□□ -0.09
SCLT1-208ENST00000506368 SNRPEP62304 92 aaKnown RBP14.47□□□□□ -0.09
SCLT1-208ENST00000506368 EIF5AP63241 154 aaKnown RBP14.47□□□□□ -0.09
SCLT1-208ENST00000506368 EXOSC6Q5RKV6 272 aaKnown RBP14.47□□□□□ -0.09
SCLT1-208ENST00000506368 CORO6Q6QEF8 472 aa14.47□□□□□ -0.09
SCLT1-208ENST00000506368 ARL14Q8N4G2 192 aa14.47□□□□□ -0.09
SCLT1-208ENST00000506368 TTTY10Q9BZA0 68 aa14.47□□□□□ -0.09
SCLT1-208ENST00000506368 CHST6Q9GZX3 395 aa14.47□□□□□ -0.09
SCLT1-208ENST00000506368 ZBP1Q9H171 429 aa14.47□□□□□ -0.09
SCLT1-208ENST00000506368 KLHL31Q9H511 634 aa14.47□□□□□ -0.09
SCLT1-208ENST00000506368 TUBA4BQ9H853 241 aa14.47□□□□□ -0.09
SCLT1-208ENST00000506368 RCC2Q9P258 522 aaKnown RBP14.47□□□□□ -0.09
SCLT1-208ENST00000506368 TRBV6-7A0A0A0MS04 114 aa14.46□□□□□ -0.09
SCLT1-208ENST00000506368 LOC100289279A0A1B0GTE1 492 aa14.46□□□□□ -0.09
SCLT1-208ENST00000506368 IL2RAP01589 272 aa14.46□□□□□ -0.09
SCLT1-208ENST00000506368 IGHV2-70P01814 119 aa14.46□□□□□ -0.09
SCLT1-208ENST00000506368 FBP1P09467 338 aa14.46□□□□□ -0.09
SCLT1-208ENST00000506368 PRF1P14222 555 aa14.46□□□□□ -0.09
SCLT1-208ENST00000506368 PSMB5P28074 263 aa14.46□□□□□ -0.09
SCLT1-208ENST00000506368 STARD6P59095 220 aa14.46□□□□□ -0.09
SCLT1-208ENST00000506368 CYCSP99999 105 aaKnown RBP14.46□□□□□ -0.09
SCLT1-208ENST00000506368 AIMP2Q13155 320 aaKnown RBP14.46□□□□□ -0.09
SCLT1-208ENST00000506368 STPG1Q5TH74 334 aa14.46□□□□□ -0.09
SCLT1-208ENST00000506368 NKAIN2Q5VXU1 208 aa14.46□□□□□ -0.09
SCLT1-208ENST00000506368 METRNLQ641Q3 311 aa14.46□□□□□ -0.09
SCLT1-208ENST00000506368 EIF5AL1Q6IS14 154 aaKnown RBP14.46□□□□□ -0.09
SCLT1-208ENST00000506368 FAM111BQ6SJ93 734 aa14.46□□□□□ -0.09
SCLT1-208ENST00000506368 PARS2Q7L3T8 475 aaKnown RBP14.46□□□□□ -0.09
SCLT1-208ENST00000506368 ZDHHC22Q8N966 263 aa14.46□□□□□ -0.09
SCLT1-208ENST00000506368 ZSCAN1Q8NBB4 408 aa14.46□□□□□ -0.09
SCLT1-208ENST00000506368 OR4K13Q8NH42 304 aa14.46□□□□□ -0.09
SCLT1-208ENST00000506368 NRIP2Q9BQI9 281 aa14.46□□□□□ -0.09
SCLT1-208ENST00000506368 ENTPD2Q9Y5L3 495 aa14.46□□□□□ -0.09
SCLT1-208ENST00000506368 TRAV18A0A075B6X5 111 aa14.46□□□□□ -0.09
SCLT1-208ENST00000506368 METTL21EPA6NDL7 271 aa14.46□□□□□ -0.09
SCLT1-208ENST00000506368 TMEM212A6NML5 194 aa14.46□□□□□ -0.09
SCLT1-208ENST00000506368 TO15178 435 aa14.46□□□□□ -0.09
SCLT1-208ENST00000506368 PPM1DO15297 605 aa14.46□□□□□ -0.09
SCLT1-208ENST00000506368 GUSBP08236 651 aa14.46□□□□□ -0.09
SCLT1-208ENST00000506368 TMIGD3P0DMS9 266 aaPredicted RBP14.46□□□□□ -0.09
SCLT1-208ENST00000506368 AK4P27144 223 aaPredicted RBP14.46□□□□□ -0.09
SCLT1-208ENST00000506368 FHL1Q13642 323 aa14.46□□□□□ -0.09
SCLT1-208ENST00000506368 DUSP5Q16690 384 aa14.46□□□□□ -0.09
SCLT1-208ENST00000506368 DCST2Q5T1A1 773 aa14.46□□□□□ -0.09
SCLT1-208ENST00000506368 ATPAF1Q5TC12 328 aaPredicted RBP14.46□□□□□ -0.09
SCLT1-208ENST00000506368 PRAMEF17Q5VTA0 474 aa14.46□□□□□ -0.09
SCLT1-208ENST00000506368 SLC16A9Q7RTY1 509 aa14.46□□□□□ -0.09
SCLT1-208ENST00000506368 LYG2Q86SG7 212 aa14.46□□□□□ -0.09
SCLT1-208ENST00000506368 OR7G2Q8NG99 324 aa14.46□□□□□ -0.09
SCLT1-208ENST00000506368 TCTEX1D2Q8WW35 142 aa14.46□□□□□ -0.09
SCLT1-208ENST00000506368 ZNF707Q96C28 371 aaPredicted RBP14.46□□□□□ -0.09
SCLT1-208ENST00000506368 MRGPRX3Q96LB0 322 aa14.46□□□□□ -0.09
SCLT1-208ENST00000506368 PHB2Q99623 299 aa14.46□□□□□ -0.09
SCLT1-208ENST00000506368 PRRT1Q99946 306 aa14.46□□□□□ -0.09
SCLT1-208ENST00000506368 SYNPO2LQ9H987 977 aa14.46□□□□□ -0.09
SCLT1-208ENST00000506368 RXFP3Q9NSD7 469 aa14.46□□□□□ -0.09
SCLT1-208ENST00000506368 ASH2LQ9UBL3 628 aa14.46□□□□□ -0.09
SCLT1-208ENST00000506368 WIF1Q9Y5W5 379 aa14.46□□□□□ -0.09
SCLT1-208ENST00000506368 C1QTNF3-AMACRE9PGA6 284 aa14.45□□□□□ -0.1
SCLT1-208ENST00000506368 AKR7A3O95154 331 aa14.45□□□□□ -0.1
SCLT1-208ENST00000506368 CXCL14O95715 111 aa14.45□□□□□ -0.1
SCLT1-208ENST00000506368 MT-ND4LP03901 98 aa14.45□□□□□ -0.1
SCLT1-208ENST00000506368 PTGER1P34995 402 aa14.45□□□□□ -0.1
SCLT1-208ENST00000506368 BCL6P41182 706 aa14.45□□□□□ -0.1
SCLT1-208ENST00000506368 CSNK1EP49674 416 aaKnown RBP14.45□□□□□ -0.1
SCLT1-208ENST00000506368 RASGEF1BQ0VAM2 473 aa14.45□□□□□ -0.1
SCLT1-208ENST00000506368 TEX30Q5JUR7 227 aa14.45□□□□□ -0.1
SCLT1-208ENST00000506368 OR4K17Q8NGC6 315 aa14.45□□□□□ -0.1
SCLT1-208ENST00000506368 PAQR8Q8TEZ7 354 aa14.45□□□□□ -0.1
SCLT1-208ENST00000506368 MITD1Q8WV92 249 aa14.45□□□□□ -0.1
SCLT1-208ENST00000506368 SEC61A2Q9H9S3 476 aa14.45□□□□□ -0.1
SCLT1-208ENST00000506368 ZNF230Q9UIE0 474 aaPredicted RBP14.45□□□□□ -0.1
SCLT1-208ENST00000506368 TVP23AA6NH52 213 aa14.45□□□□□ -0.1
SCLT1-208ENST00000506368 HLA-AP01891 365 aaKnown RBP14.45□□□□□ -0.1
SCLT1-208ENST00000506368 PRNPP04156 253 aa14.45□□□□□ -0.1
SCLT1-208ENST00000506368 CD14P08571 375 aa14.45□□□□□ -0.1
SCLT1-208ENST00000506368 SLC35G4P0C7Q5 338 aa14.45□□□□□ -0.1
SCLT1-208ENST00000506368 RAB28P51157 221 aa14.45□□□□□ -0.1
SCLT1-208ENST00000506368 CAV2P51636 162 aa14.45□□□□□ -0.1
SCLT1-208ENST00000506368 SLC25A1P53007 311 aa14.45□□□□□ -0.1
SCLT1-208ENST00000506368 SLC25A42Q86VD7 318 aa14.45□□□□□ -0.1
SCLT1-208ENST00000506368 CDRT4Q8N9R6 151 aa14.45□□□□□ -0.1
SCLT1-208ENST00000506368 NPEPL1Q8NDH3 523 aa14.45□□□□□ -0.1
SCLT1-208ENST00000506368 OR4A4PQ8NGN8 299 aa14.45□□□□□ -0.1
SCLT1-208ENST00000506368 OR2A1Q8NGT9 310 aa14.45□□□□□ -0.1
SCLT1-208ENST00000506368 FOXRED1Q96CU9 486 aaPredicted RBP14.45□□□□□ -0.1
SCLT1-208ENST00000506368 ZNF285Q96NJ3 590 aa14.45□□□□□ -0.1
SCLT1-208ENST00000506368 TSPAN10Q9H1Z9 355 aaPredicted RBP14.45□□□□□ -0.1
SCLT1-208ENST00000506368 SLC22A11Q9NSA0 550 aa14.45□□□□□ -0.1
SCLT1-208ENST00000506368 MIOXQ9UGB7 285 aa14.45□□□□□ -0.1
SCLT1-208ENST00000506368 IER3IP1Q9Y5U9 82 aa14.45□□□□□ -0.1
SCLT1-208ENST00000506368 IGKV1-8A0A0C4DH67 115 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms