RNA–Protein interactions for RNA: ENST00000504813.5

CNBP-208, Transcript of CCHC-type zinc finger nucleic acid binding protein, human

APPRIS ALT1 TSL 2 BASIC

Gene CNBP, Length 1,549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNBP-208	ENST00000504813	NCMAP	Q5T1S8	102 aa		12.97	□□□□□ -0.33
CNBP-208	ENST00000504813	SLX4IP	Q5VYV7	408 aa		12.97	□□□□□ -0.33
CNBP-208	ENST00000504813	ALKBH2	Q6NS38	261 aa		12.97	□□□□□ -0.33
CNBP-208	ENST00000504813	RPL13AP3	Q6NVV1	102 aa		12.97	□□□□□ -0.33
CNBP-208	ENST00000504813	LINC00114	Q6XXX2	140 aa		12.97	□□□□□ -0.33
CNBP-208	ENST00000504813	TMPRSS11F	Q6ZWK6	438 aa		12.97	□□□□□ -0.33
CNBP-208	ENST00000504813	MEX3D	Q86XN8	651 aa	Known RBP	12.97	□□□□□ -0.33
CNBP-208	ENST00000504813	P3H2	Q8IVL5	708 aa		12.97	□□□□□ -0.33
CNBP-208	ENST00000504813	TMEM99	Q8N816	258 aa		12.97	□□□□□ -0.33
CNBP-208	ENST00000504813	PFN4	Q8NHR9	129 aa		12.97	□□□□□ -0.33
CNBP-208	ENST00000504813	FBLIM1	Q8WUP2	373 aa		12.97	□□□□□ -0.33
CNBP-208	ENST00000504813	IGFBPL1	Q8WX77	278 aa		12.97	□□□□□ -0.33
CNBP-208	ENST00000504813	GPA33	Q99795	319 aa		12.97	□□□□□ -0.33
CNBP-208	ENST00000504813	ZNF426	Q9BUY5	554 aa		12.97	□□□□□ -0.33
CNBP-208	ENST00000504813	SLC19A3	Q9BZV2	496 aa		12.97	□□□□□ -0.33
CNBP-208	ENST00000504813	TBC1D23	Q9NUY8	699 aa		12.97	□□□□□ -0.33
CNBP-208	ENST00000504813	MALT1	Q9UDY8	824 aa		12.97	□□□□□ -0.33
CNBP-208	ENST00000504813	ROS1	P08922	2347 aa		12.97	□□□□□ -0.33
CNBP-208	ENST00000504813		A0A087WXM4	84 aa		12.96	□□□□□ -0.33
CNBP-208	ENST00000504813	AQP7P3	A6NL99	342 aa		12.96	□□□□□ -0.33
CNBP-208	ENST00000504813	P2RY4	P51582	365 aa		12.96	□□□□□ -0.33
CNBP-208	ENST00000504813	CXCR4	P61073	352 aa		12.96	□□□□□ -0.33
CNBP-208	ENST00000504813	EGR4	Q05215	589 aa		12.96	□□□□□ -0.33
CNBP-208	ENST00000504813	GINS1	Q14691	196 aa		12.96	□□□□□ -0.33
CNBP-208	ENST00000504813	TIMM23B	Q5SRD1	257 aa		12.96	□□□□□ -0.33
CNBP-208	ENST00000504813	C1orf140	Q5VVS0	124 aa		12.96	□□□□□ -0.33
CNBP-208	ENST00000504813	TMEM236	Q5W0B7	351 aa		12.96	□□□□□ -0.33
CNBP-208	ENST00000504813	PTCHD4	Q6ZW05	846 aa		12.96	□□□□□ -0.33
CNBP-208	ENST00000504813	ENTHD1	Q8IYW4	607 aa		12.96	□□□□□ -0.33
CNBP-208	ENST00000504813	LRRC75A-AS1	Q8N1F1	130 aa		12.96	□□□□□ -0.33
CNBP-208	ENST00000504813	UBE2J2	Q8N2K1	259 aa		12.96	□□□□□ -0.33
CNBP-208	ENST00000504813	CLDN22	Q8N7P3	220 aa		12.96	□□□□□ -0.33
CNBP-208	ENST00000504813	WFDC11	Q8NEX6	87 aa		12.96	□□□□□ -0.33
CNBP-208	ENST00000504813	LILRB1	Q8NHL6	650 aa	Predicted RBP	12.96	□□□□□ -0.33
CNBP-208	ENST00000504813	CNIH3	Q8TBE1	160 aa		12.96	□□□□□ -0.33
CNBP-208	ENST00000504813	STK35	Q8TDR2	534 aa		12.96	□□□□□ -0.33
CNBP-208	ENST00000504813	SGTB	Q96EQ0	304 aa		12.96	□□□□□ -0.33
CNBP-208	ENST00000504813	CCL19	Q99731	98 aa		12.96	□□□□□ -0.33
CNBP-208	ENST00000504813	SF3B5	Q9BWJ5	86 aa	Known RBP	12.96	□□□□□ -0.33
CNBP-208	ENST00000504813	NGB	Q9NPG2	151 aa		12.96	□□□□□ -0.33
CNBP-208	ENST00000504813	TPRKB	Q9Y3C4	175 aa		12.96	□□□□□ -0.33
CNBP-208	ENST00000504813	CDH10	Q9Y6N8	788 aa		12.96	□□□□□ -0.33
CNBP-208	ENST00000504813	ARID1A	O14497	2285 aa		12.95	□□□□□ -0.34
CNBP-208	ENST00000504813	CLPTM1	O96005	669 aa		12.95	□□□□□ -0.34
CNBP-208	ENST00000504813	IGFBP1	P08833	259 aa	Predicted RBP	12.95	□□□□□ -0.34
CNBP-208	ENST00000504813	CCDC159	P0C7I6	412 aa		12.95	□□□□□ -0.34
CNBP-208	ENST00000504813	ATP6V1B1	P15313	513 aa		12.95	□□□□□ -0.34
CNBP-208	ENST00000504813	GIPR	P48546	466 aa		12.95	□□□□□ -0.34
CNBP-208	ENST00000504813	FOXG1	P55316	489 aa	Predicted RBP	12.95	□□□□□ -0.34
CNBP-208	ENST00000504813	NKX6-1	P78426	367 aa	Predicted RBP	12.95	□□□□□ -0.34
CNBP-208	ENST00000504813	TEK	Q02763	1124 aa		12.95	□□□□□ -0.34
CNBP-208	ENST00000504813	STK11	Q15831	433 aa		12.95	□□□□□ -0.34
CNBP-208	ENST00000504813	SLC27A4	Q6P1M0	643 aa		12.95	□□□□□ -0.34
CNBP-208	ENST00000504813	P2RY8	Q86VZ1	359 aa		12.95	□□□□□ -0.34
CNBP-208	ENST00000504813	ZIC4	Q8N9L1	334 aa		12.95	□□□□□ -0.34
CNBP-208	ENST00000504813	BPIFB6	Q8NFQ5	453 aa		12.95	□□□□□ -0.34
CNBP-208	ENST00000504813	OR52L1	Q8NGH7	329 aa		12.95	□□□□□ -0.34
CNBP-208	ENST00000504813	RHOXF1	Q8NHV9	184 aa		12.95	□□□□□ -0.34
CNBP-208	ENST00000504813	FANK1	Q8TC84	345 aa		12.95	□□□□□ -0.34
CNBP-208	ENST00000504813	TRUB1	Q8WWH5	349 aa	Known RBP	12.95	□□□□□ -0.34
CNBP-208	ENST00000504813	TMEM45B	Q96B21	275 aa		12.95	□□□□□ -0.34
CNBP-208	ENST00000504813		Q96MT0	163 aa		12.95	□□□□□ -0.34
CNBP-208	ENST00000504813	SLC38A2	Q96QD8	506 aa		12.95	□□□□□ -0.34
CNBP-208	ENST00000504813	TMEM43	Q9BTV4	400 aa		12.95	□□□□□ -0.34
CNBP-208	ENST00000504813	ESRP2	Q9H6T0	727 aa	Known RBP	12.95	□□□□□ -0.34
CNBP-208	ENST00000504813	EGLN3	Q9H6Z9	239 aa		12.95	□□□□□ -0.34
CNBP-208	ENST00000504813	SLC25A19	Q9HC21	320 aa		12.95	□□□□□ -0.34
CNBP-208	ENST00000504813	DLL4	Q9NR61	685 aa		12.95	□□□□□ -0.34
CNBP-208	ENST00000504813	C20orf141	Q9NUB4	165 aa		12.95	□□□□□ -0.34
CNBP-208	ENST00000504813	CLN6	Q9NWW5	311 aa		12.95	□□□□□ -0.34
CNBP-208	ENST00000504813	ASB6	Q9NWX5	421 aa		12.95	□□□□□ -0.34
CNBP-208	ENST00000504813	CAD	P27708	2225 aa		12.95	□□□□□ -0.34
CNBP-208	ENST00000504813	OR5H1	A6NKK0	313 aa		12.94	□□□□□ -0.34
CNBP-208	ENST00000504813	FTCDNL1	E5RQL4	147 aa		12.94	□□□□□ -0.34
CNBP-208	ENST00000504813	SLC1A7	O00341	560 aa		12.94	□□□□□ -0.34
CNBP-208	ENST00000504813	HS3ST1	O14792	307 aa		12.94	□□□□□ -0.34
CNBP-208	ENST00000504813	SMPD2	O60906	423 aa		12.94	□□□□□ -0.34
CNBP-208	ENST00000504813	RAD51D	O75771	328 aa		12.94	□□□□□ -0.34
CNBP-208	ENST00000504813	TP53	P04637	393 aa	Predicted RBP	12.94	□□□□□ -0.34
CNBP-208	ENST00000504813	ITGA5	P08648	1049 aa		12.94	□□□□□ -0.34
CNBP-208	ENST00000504813	MAK	P20794	623 aa		12.94	□□□□□ -0.34
CNBP-208	ENST00000504813	CRHBP	P24387	322 aa		12.94	□□□□□ -0.34
CNBP-208	ENST00000504813	GABARAPL2	P60520	117 aa		12.94	□□□□□ -0.34
CNBP-208	ENST00000504813	TUBA4A	P68366	448 aa		12.94	□□□□□ -0.34
CNBP-208	ENST00000504813	FAP	Q12884	760 aa		12.94	□□□□□ -0.34
CNBP-208	ENST00000504813	PPA1	Q15181	289 aa		12.94	□□□□□ -0.34
CNBP-208	ENST00000504813	C12orf73	Q69YU5	71 aa		12.94	□□□□□ -0.34
CNBP-208	ENST00000504813	ADAM5	Q6NVV9	412 aa		12.94	□□□□□ -0.34
CNBP-208	ENST00000504813	ZNF620	Q6ZNG0	422 aa		12.94	□□□□□ -0.34
CNBP-208	ENST00000504813	C10orf53	Q8N6V4	93 aa		12.94	□□□□□ -0.34
CNBP-208	ENST00000504813	ZNF611	Q8N823	705 aa		12.94	□□□□□ -0.34
CNBP-208	ENST00000504813	OR9K2	Q8NGE7	335 aa		12.94	□□□□□ -0.34
CNBP-208	ENST00000504813	MFSD8	Q8NHS3	518 aa		12.94	□□□□□ -0.34
CNBP-208	ENST00000504813	AKAP1	Q92667	903 aa	Known RBP eCLIP	12.94	□□□□□ -0.34
CNBP-208	ENST00000504813	ZNF566	Q969W8	418 aa		12.94	□□□□□ -0.34
CNBP-208	ENST00000504813	ZNF385A	Q96PM9	386 aa	Known RBP	12.94	□□□□□ -0.34
CNBP-208	ENST00000504813	PTDSS2	Q9BVG9	487 aa		12.94	□□□□□ -0.34
CNBP-208	ENST00000504813	TAPBPL	Q9BX59	468 aa		12.94	□□□□□ -0.34
CNBP-208	ENST00000504813	TSSK6	Q9BXA6	273 aa		12.94	□□□□□ -0.34
CNBP-208	ENST00000504813	MEPE	Q9NQ76	525 aa	Predicted RBP	12.94	□□□□□ -0.34

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