RNA–Protein interactions for RNA: ENST00000504327.1

PDLIM1P4-201, Transcript of PDZ and LIM domain 1 pseudogene 4, humanhuman

BASIC

Gene PDLIM1P4, Length 1,006 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P4-201ENST00000504327 KRTAP10-7P60409 375 aaPredicted RBP3.62□□□□□ -1.83
PDLIM1P4-201ENST00000504327 CHRNB3Q05901 458 aa3.62□□□□□ -1.83
PDLIM1P4-201ENST00000504327 LAMTOR4Q0VGL1 99 aa3.62□□□□□ -1.83
PDLIM1P4-201ENST00000504327 ILF3Q12906 894 aaKnown RBP eCLIP3.62□□□□□ -1.83
PDLIM1P4-201ENST00000504327 SELENBP1Q13228 472 aa3.62□□□□□ -1.83
PDLIM1P4-201ENST00000504327 SLAMF1Q13291 335 aa3.62□□□□□ -1.83
PDLIM1P4-201ENST00000504327 GTF2H2Q13888 395 aa3.62□□□□□ -1.83
PDLIM1P4-201ENST00000504327 UBE2V2Q15819 145 aa3.62□□□□□ -1.83
PDLIM1P4-201ENST00000504327 ZNF77Q15935 545 aa3.62□□□□□ -1.83
PDLIM1P4-201ENST00000504327 DMRTC1Q5HYR2 192 aa3.62□□□□□ -1.83
PDLIM1P4-201ENST00000504327 ZNF691Q5VV52 312 aa3.62□□□□□ -1.83
PDLIM1P4-201ENST00000504327 RNLSQ5VYX0 342 aa3.62□□□□□ -1.83
PDLIM1P4-201ENST00000504327 GTF2H2CQ6P1K8 395 aa3.62□□□□□ -1.83
PDLIM1P4-201ENST00000504327 TMPRSS11AQ6ZMR5 421 aa3.62□□□□□ -1.83
PDLIM1P4-201ENST00000504327 ZNF730Q6ZMV8 503 aa3.62□□□□□ -1.83
PDLIM1P4-201ENST00000504327 FCRLAQ7L513 359 aa3.62□□□□□ -1.83
PDLIM1P4-201ENST00000504327 PIWIL4Q7Z3Z4 852 aaKnown RBP3.62□□□□□ -1.83
PDLIM1P4-201ENST00000504327 HPS6Q86YV9 775 aa3.62□□□□□ -1.83
PDLIM1P4-201ENST00000504327 DAW1Q8N136 415 aa3.62□□□□□ -1.83
PDLIM1P4-201ENST00000504327 SYS1Q8N2H4 156 aa3.62□□□□□ -1.83
PDLIM1P4-201ENST00000504327 RFLNBQ8N5W9 214 aa3.62□□□□□ -1.83
PDLIM1P4-201ENST00000504327 TCEANCQ8N8B7 351 aa3.62□□□□□ -1.83
PDLIM1P4-201ENST00000504327 SNX31Q8N9S9 440 aa3.62□□□□□ -1.83
PDLIM1P4-201ENST00000504327 TTC29Q8NA56 475 aaPredicted RBP3.62□□□□□ -1.83
PDLIM1P4-201ENST00000504327 ZSCAN4Q8NAM6 433 aaPredicted RBP3.62□□□□□ -1.83
PDLIM1P4-201ENST00000504327 CYB561A3Q8NBI2 242 aa3.62□□□□□ -1.83
PDLIM1P4-201ENST00000504327 NECAP1Q8NC96 275 aa3.62□□□□□ -1.83
PDLIM1P4-201ENST00000504327 OR1B1Q8NGR6 318 aa3.62□□□□□ -1.83
PDLIM1P4-201ENST00000504327 CNIH3Q8TBE1 160 aa3.62□□□□□ -1.83
PDLIM1P4-201ENST00000504327 FAM110BQ8TC76 370 aa3.62□□□□□ -1.83
PDLIM1P4-201ENST00000504327 PHOSPHO2Q8TCD6 241 aa3.62□□□□□ -1.83
PDLIM1P4-201ENST00000504327 FBXO25Q8TCJ0 367 aa3.62□□□□□ -1.83
PDLIM1P4-201ENST00000504327 AENQ8WTP8 325 aaKnown RBP3.62□□□□□ -1.83
PDLIM1P4-201ENST00000504327 SMAP2Q8WU79 429 aaPredicted RBP3.62□□□□□ -1.83
PDLIM1P4-201ENST00000504327 TMEM239Q8WW34 195 aa3.62□□□□□ -1.83
PDLIM1P4-201ENST00000504327 CAPSLQ8WWF8 208 aa3.62□□□□□ -1.83
PDLIM1P4-201ENST00000504327 ZNF641Q96N77 438 aaPredicted RBP3.62□□□□□ -1.83
PDLIM1P4-201ENST00000504327 ZNF251Q9BRH9 671 aa3.62□□□□□ -1.83
PDLIM1P4-201ENST00000504327 NIPSNAP3BQ9BS92 247 aa3.62□□□□□ -1.83
PDLIM1P4-201ENST00000504327 CHID1Q9BWS9 393 aa3.62□□□□□ -1.83
PDLIM1P4-201ENST00000504327 PPA2Q9H2U2 334 aa3.62□□□□□ -1.83
PDLIM1P4-201ENST00000504327 NIPAL2Q9H841 368 aa3.62□□□□□ -1.83
PDLIM1P4-201ENST00000504327 C3orf14Q9HBI5 128 aa3.62□□□□□ -1.83
PDLIM1P4-201ENST00000504327 APOBEC3GQ9HC16 384 aaKnown RBP3.62□□□□□ -1.83
PDLIM1P4-201ENST00000504327 MDFICQ9P1T7 246 aa3.62□□□□□ -1.83
PDLIM1P4-201ENST00000504327 ABCD2Q9UBJ2 740 aa3.62□□□□□ -1.83
PDLIM1P4-201ENST00000504327 DCDC2Q9UHG0 476 aa3.62□□□□□ -1.83
PDLIM1P4-201ENST00000504327 NAGKQ9UJ70 344 aa3.62□□□□□ -1.83
PDLIM1P4-201ENST00000504327 AK6Q9Y3D8 172 aaKnown RBP3.62□□□□□ -1.83
PDLIM1P4-201ENST00000504327 OR2W1Q9Y3N9 320 aa3.62□□□□□ -1.83
PDLIM1P4-201ENST00000504327 CDH10Q9Y6N8 788 aa3.62□□□□□ -1.83
PDLIM1P4-201ENST00000504327 ADGRA3Q8IWK6 1321 aa3.62□□□□□ -1.83
PDLIM1P4-201ENST00000504327 MYH11P35749 1972 aa3.62□□□□□ -1.83
PDLIM1P4-201ENST00000504327 CACNA1BQ00975 2339 aa3.61□□□□□ -1.83
PDLIM1P4-201ENST00000504327 NPIPA5A0A0B4J1W7 369 aa3.61□□□□□ -1.83
PDLIM1P4-201ENST00000504327 C5orf60A6NFR6 353 aa3.61□□□□□ -1.83
PDLIM1P4-201ENST00000504327 EPOPA6NHQ4 379 aa3.61□□□□□ -1.83
PDLIM1P4-201ENST00000504327 CENPBD1B2RD01 187 aa3.61□□□□□ -1.83
PDLIM1P4-201ENST00000504327 PRAC2D3DTV9 90 aa3.61□□□□□ -1.83
PDLIM1P4-201ENST00000504327 E7ESA3 106 aa3.61□□□□□ -1.83
PDLIM1P4-201ENST00000504327 NPIPA5E9PKD4 350 aa3.61□□□□□ -1.83
PDLIM1P4-201ENST00000504327 BLOC1S5-TXNDC5H3BN57 136 aa3.61□□□□□ -1.83
PDLIM1P4-201ENST00000504327 LIN7AO14910 233 aaPredicted RBP3.61□□□□□ -1.83
PDLIM1P4-201ENST00000504327 B4GALT5O43286 388 aa3.61□□□□□ -1.83
PDLIM1P4-201ENST00000504327 XRCC2O43543 280 aa3.61□□□□□ -1.83
PDLIM1P4-201ENST00000504327 GMDSO60547 372 aa3.61□□□□□ -1.83
PDLIM1P4-201ENST00000504327 ENTPD5O75356 428 aa3.61□□□□□ -1.83
PDLIM1P4-201ENST00000504327 CLDN14O95500 239 aa3.61□□□□□ -1.83
PDLIM1P4-201ENST00000504327 IFNW1P05000 195 aa3.61□□□□□ -1.83
PDLIM1P4-201ENST00000504327 STSP08842 583 aa3.61□□□□□ -1.83
PDLIM1P4-201ENST00000504327 RPSAP08865 295 aaKnown RBP3.61□□□□□ -1.83
PDLIM1P4-201ENST00000504327 NR2C1P13056 603 aa3.61□□□□□ -1.83
PDLIM1P4-201ENST00000504327 XRCC1P18887 633 aaPredicted RBP3.61□□□□□ -1.83
PDLIM1P4-201ENST00000504327 EFNA1P20827 205 aaPredicted RBP3.61□□□□□ -1.83
PDLIM1P4-201ENST00000504327 CA6P23280 308 aa3.61□□□□□ -1.83
PDLIM1P4-201ENST00000504327 ATP5A1P25705 553 aaKnown RBP3.61□□□□□ -1.83
PDLIM1P4-201ENST00000504327 RPL4P36578 427 aaKnown RBP3.61□□□□□ -1.83
PDLIM1P4-201ENST00000504327 FEN1P39748 380 aaKnown RBP3.61□□□□□ -1.83
PDLIM1P4-201ENST00000504327 SLC1A1P43005 524 aa3.61□□□□□ -1.83
PDLIM1P4-201ENST00000504327 CDH11P55287 796 aa3.61□□□□□ -1.83
PDLIM1P4-201ENST00000504327 OR1D5P58170 312 aa3.61□□□□□ -1.83
PDLIM1P4-201ENST00000504327 OR2B6P58173 313 aa3.61□□□□□ -1.83
PDLIM1P4-201ENST00000504327 BRWD1-AS2P59051 145 aa3.61□□□□□ -1.83
PDLIM1P4-201ENST00000504327 ABCE1P61221 599 aaKnown RBP3.61□□□□□ -1.83
PDLIM1P4-201ENST00000504327 HERV-K104P61576 105 aa3.61□□□□□ -1.83
PDLIM1P4-201ENST00000504327 SNRPFP62306 86 aaKnown RBP3.61□□□□□ -1.83
PDLIM1P4-201ENST00000504327 STX5Q13190 355 aa3.61□□□□□ -1.83
PDLIM1P4-201ENST00000504327 DUSP5Q16690 384 aa3.61□□□□□ -1.83
PDLIM1P4-201ENST00000504327 HLA-BQ31612 363 aa3.61□□□□□ -1.83
PDLIM1P4-201ENST00000504327 RFTN2Q52LD8 501 aaPredicted RBP3.61□□□□□ -1.83
PDLIM1P4-201ENST00000504327 C5orf47Q569G3 176 aa3.61□□□□□ -1.83
PDLIM1P4-201ENST00000504327 TMEM31Q5JXX7 168 aa3.61□□□□□ -1.83
PDLIM1P4-201ENST00000504327 SAMD4BQ5PRF9 694 aaKnown RBP3.61□□□□□ -1.83
PDLIM1P4-201ENST00000504327 C1orf220Q5T0J3 134 aa3.61□□□□□ -1.83
PDLIM1P4-201ENST00000504327 PDSS1Q5T2R2 415 aa3.61□□□□□ -1.83
PDLIM1P4-201ENST00000504327 ADAM5Q6NVV9 412 aa3.61□□□□□ -1.83
PDLIM1P4-201ENST00000504327 PNCKQ6P2M8 343 aa3.61□□□□□ -1.83
PDLIM1P4-201ENST00000504327 HACD2Q6Y1H2 254 aa3.61□□□□□ -1.83
PDLIM1P4-201ENST00000504327 ASB18Q6ZVZ8 466 aa3.61□□□□□ -1.83
PDLIM1P4-201ENST00000504327 USP43Q70EL4 1123 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms