RNA–Protein interactions for RNA: ENST00000498689.5

CSTF1-207, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 1 (best)

Gene CSTF1, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-207ENST00000498689 ZHX1-C8orf76Q96EF9 292 aa3.6□□□□□ -1.83
CSTF1-207ENST00000498689 SAMD8Q96LT4 415 aa3.6□□□□□ -1.83
CSTF1-207ENST00000498689 C17orf77Q96MU5 243 aa3.6□□□□□ -1.83
CSTF1-207ENST00000498689 PPP1R2P1Q96PQ5 205 aa3.6□□□□□ -1.83
CSTF1-207ENST00000498689 TMED9Q9BVK6 235 aa3.6□□□□□ -1.83
CSTF1-207ENST00000498689 NAT10Q9H0A0 1025 aaKnown RBP3.6□□□□□ -1.83
CSTF1-207ENST00000498689 TRIM36Q9NQ86 728 aa3.6□□□□□ -1.83
CSTF1-207ENST00000498689 FBXO5Q9UKT4 447 aa3.6□□□□□ -1.83
CSTF1-207ENST00000498689 TMCC3Q9ULS5 477 aa3.6□□□□□ -1.83
CSTF1-207ENST00000498689 APLNQ9ULZ1 77 aa3.6□□□□□ -1.83
CSTF1-207ENST00000498689 MYRFQ9Y2G1 1151 aa3.6□□□□□ -1.83
CSTF1-207ENST00000498689 KPTNQ9Y664 436 aa3.6□□□□□ -1.83
CSTF1-207ENST00000498689 CAPN7Q9Y6W3 813 aa3.6□□□□□ -1.83
CSTF1-207ENST00000498689 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.59□□□□□ -1.83
CSTF1-207ENST00000498689 MACROD2A1Z1Q3 448 aa3.59□□□□□ -1.83
CSTF1-207ENST00000498689 NPEPPSL1A6NEC2 478 aa3.59□□□□□ -1.83
CSTF1-207ENST00000498689 RPL36A-HNRNPH2H7BZ11 118 aa3.59□□□□□ -1.83
CSTF1-207ENST00000498689 APOC4-APOC2K7ER74 178 aa3.59□□□□□ -1.83
CSTF1-207ENST00000498689 RAD51CO43502 376 aa3.59□□□□□ -1.83
CSTF1-207ENST00000498689 BCAS2O75934 225 aaPredicted RBP3.59□□□□□ -1.83
CSTF1-207ENST00000498689 MFN2O95140 757 aa3.59□□□□□ -1.83
CSTF1-207ENST00000498689 AKR7A3O95154 331 aa3.59□□□□□ -1.83
CSTF1-207ENST00000498689 APOC2P02655 101 aa3.59□□□□□ -1.83
CSTF1-207ENST00000498689 KLK1P06870 262 aa3.59□□□□□ -1.83
CSTF1-207ENST00000498689 NGFRP08138 427 aa3.59□□□□□ -1.83
CSTF1-207ENST00000498689 LTA4HP09960 611 aaKnown RBP3.59□□□□□ -1.83
CSTF1-207ENST00000498689 ARSBP15848 533 aa3.59□□□□□ -1.83
CSTF1-207ENST00000498689 CCNA2P20248 432 aa3.59□□□□□ -1.83
CSTF1-207ENST00000498689 CPT2P23786 658 aa3.59□□□□□ -1.83
CSTF1-207ENST00000498689 PRPH2P23942 346 aa3.59□□□□□ -1.83
CSTF1-207ENST00000498689 GABRA3P34903 492 aa3.59□□□□□ -1.83
CSTF1-207ENST00000498689 SLC1A2P43004 574 aa3.59□□□□□ -1.83
CSTF1-207ENST00000498689 UBE2E1P51965 193 aa3.59□□□□□ -1.83
CSTF1-207ENST00000498689 MVDP53602 400 aa3.59□□□□□ -1.83
CSTF1-207ENST00000498689 SH3BGRP55822 239 aaPredicted RBP3.59□□□□□ -1.83
CSTF1-207ENST00000498689 MERTKQ12866 999 aa3.59□□□□□ -1.83
CSTF1-207ENST00000498689 AANATQ16613 207 aa3.59□□□□□ -1.83
CSTF1-207ENST00000498689 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.59□□□□□ -1.83
CSTF1-207ENST00000498689 LRIG3Q6UXM1 1119 aa3.59□□□□□ -1.83
CSTF1-207ENST00000498689 LINC00322Q6ZN03 302 aaPredicted RBP3.59□□□□□ -1.83
CSTF1-207ENST00000498689 DCDC5Q6ZRR9 648 aa3.59□□□□□ -1.83
CSTF1-207ENST00000498689 SPATA12Q7Z6I5 190 aa3.59□□□□□ -1.83
CSTF1-207ENST00000498689 PATL1Q86TB9 770 aaKnown RBP3.59□□□□□ -1.83
CSTF1-207ENST00000498689 PRUNE1Q86TP1 453 aa3.59□□□□□ -1.83
CSTF1-207ENST00000498689 LYPD6Q86Y78 171 aa3.59□□□□□ -1.83
CSTF1-207ENST00000498689 OR2Z1Q8NG97 314 aa3.59□□□□□ -1.83
CSTF1-207ENST00000498689 SLC35B2Q8TB61 432 aa3.59□□□□□ -1.83
CSTF1-207ENST00000498689 FAM45AQ8TCE6 357 aa3.59□□□□□ -1.83
CSTF1-207ENST00000498689 UBTD2Q8WUN7 234 aa3.59□□□□□ -1.83
CSTF1-207ENST00000498689 OR2V2Q96R30 315 aa3.59□□□□□ -1.83
CSTF1-207ENST00000498689 EGFL8Q99944 293 aa3.59□□□□□ -1.83
CSTF1-207ENST00000498689 EFCAB11Q9BUY7 163 aa3.59□□□□□ -1.83
CSTF1-207ENST00000498689 Q9N2J8 555 aa3.59□□□□□ -1.83
CSTF1-207ENST00000498689 CTPS2Q9NRF8 586 aa3.59□□□□□ -1.83
CSTF1-207ENST00000498689 TAS2R9Q9NYW1 312 aa3.59□□□□□ -1.83
CSTF1-207ENST00000498689 ZDHHC8Q9ULC8 765 aa3.59□□□□□ -1.83
CSTF1-207ENST00000498689 GPR45Q9Y5Y3 372 aa3.59□□□□□ -1.83
CSTF1-207ENST00000498689 CEPT1Q9Y6K0 416 aa3.59□□□□□ -1.83
CSTF1-207ENST00000498689 PSMB11A5LHX3 300 aa3.58□□□□□ -1.84
CSTF1-207ENST00000498689 G3V2L1 256 aa3.58□□□□□ -1.84
CSTF1-207ENST00000498689 SAP30O75446 220 aa3.58□□□□□ -1.84
CSTF1-207ENST00000498689 PSMG1O95456 288 aa3.58□□□□□ -1.84
CSTF1-207ENST00000498689 RAB36O95755 333 aa3.58□□□□□ -1.84
CSTF1-207ENST00000498689 BPNT1O95861 308 aa3.58□□□□□ -1.84
CSTF1-207ENST00000498689 GAS8O95995 478 aa3.58□□□□□ -1.84
CSTF1-207ENST00000498689 ALDOBP05062 364 aa3.58□□□□□ -1.84
CSTF1-207ENST00000498689 DUX4L4P0CJ87 422 aa3.58□□□□□ -1.84
CSTF1-207ENST00000498689 B4GALT1P15291 398 aa3.58□□□□□ -1.84
CSTF1-207ENST00000498689 IVDP26440 423 aa3.58□□□□□ -1.84
CSTF1-207ENST00000498689 STX2P32856 288 aa3.58□□□□□ -1.84
CSTF1-207ENST00000498689 HSPA7P48741 367 aa3.58□□□□□ -1.84
CSTF1-207ENST00000498689 ALDH9A1P49189 494 aa3.58□□□□□ -1.84
CSTF1-207ENST00000498689 INSL3P51460 131 aa3.58□□□□□ -1.84
CSTF1-207ENST00000498689 SESN3P58005 492 aa3.58□□□□□ -1.84
CSTF1-207ENST00000498689 ELF3P78545 371 aaPredicted RBP3.58□□□□□ -1.84
CSTF1-207ENST00000498689 ADARB1P78563 741 aaKnown RBP3.58□□□□□ -1.84
CSTF1-207ENST00000498689 ACSM1Q08AH1 577 aa3.58□□□□□ -1.84
CSTF1-207ENST00000498689 GALNT1Q10472 559 aaPredicted RBP3.58□□□□□ -1.84
CSTF1-207ENST00000498689 KRT31Q15323 416 aa3.58□□□□□ -1.84
CSTF1-207ENST00000498689 MOGQ16653 247 aa3.58□□□□□ -1.84
CSTF1-207ENST00000498689 HIST2H2ACQ16777 129 aaPredicted RBP3.58□□□□□ -1.84
CSTF1-207ENST00000498689 TMEM177Q53S58 311 aa3.58□□□□□ -1.84
CSTF1-207ENST00000498689 ODF2Q5BJF6 829 aa3.58□□□□□ -1.84
CSTF1-207ENST00000498689 CCNJQ5T5M9 372 aa3.58□□□□□ -1.84
CSTF1-207ENST00000498689 FAM219BQ5XKK7 198 aa3.58□□□□□ -1.84
CSTF1-207ENST00000498689 HIST2H2AA3Q6FI13 130 aa3.58□□□□□ -1.84
CSTF1-207ENST00000498689 LRRC8EQ6NSJ5 796 aa3.58□□□□□ -1.84
CSTF1-207ENST00000498689 MED27Q6P2C8 311 aa3.58□□□□□ -1.84
CSTF1-207ENST00000498689 CREB3L2Q70SY1 520 aa3.58□□□□□ -1.84
CSTF1-207ENST00000498689 IGFN1Q86VF2 1251 aa3.58□□□□□ -1.84
CSTF1-207ENST00000498689 IGDCC3Q8IVU1 814 aa3.58□□□□□ -1.84
CSTF1-207ENST00000498689 FAM71E2Q8N5Q1 922 aa3.58□□□□□ -1.84
CSTF1-207ENST00000498689 SLC30A7Q8NEW0 376 aa3.58□□□□□ -1.84
CSTF1-207ENST00000498689 OR4Q3Q8NH05 313 aa3.58□□□□□ -1.84
CSTF1-207ENST00000498689 SLC25A40Q8TBP6 338 aa3.58□□□□□ -1.84
CSTF1-207ENST00000498689 KLF14Q8TD94 323 aaPredicted RBP3.58□□□□□ -1.84
CSTF1-207ENST00000498689 OTUB1Q96FW1 271 aaPredicted RBP3.58□□□□□ -1.84
CSTF1-207ENST00000498689 LINC00470Q9BZP3 86 aa3.58□□□□□ -1.84
CSTF1-207ENST00000498689 OR2J1Q9GZK6 312 aa3.58□□□□□ -1.84
CSTF1-207ENST00000498689 MMADHCQ9H3L0 296 aaPredicted RBP3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms