RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 LRR1Q96L50 414 aa13.38□□□□□ -0.27
NUP50-219ENST00000497960 SLC38A2Q96QD8 506 aa13.38□□□□□ -0.27
NUP50-219ENST00000497960 EMC6Q9BV81 110 aa13.38□□□□□ -0.27
NUP50-219ENST00000497960 CBLN4Q9NTU7 201 aa13.38□□□□□ -0.27
NUP50-219ENST00000497960 C20orf141Q9NUB4 165 aa13.38□□□□□ -0.27
NUP50-219ENST00000497960 MED29Q9NX70 200 aa13.38□□□□□ -0.27
NUP50-219ENST00000497960 TMCC3Q9ULS5 477 aa13.38□□□□□ -0.27
NUP50-219ENST00000497960 SAMHD1Q9Y3Z3 626 aaKnown RBP13.38□□□□□ -0.27
NUP50-219ENST00000497960 LYVE1Q9Y5Y7 322 aa13.38□□□□□ -0.27
NUP50-219ENST00000497960 NAV3Q8IVL0 2385 aa13.38□□□□□ -0.27
NUP50-219ENST00000497960 SLC35F4A4IF30 521 aa13.37□□□□□ -0.27
NUP50-219ENST00000497960 ANKRD65E5RJM6 399 aa13.37□□□□□ -0.27
NUP50-219ENST00000497960 ATP6V1G2-DDX39BF2Z307 99 aa13.37□□□□□ -0.27
NUP50-219ENST00000497960 TIPRLO75663 272 aa13.37□□□□□ -0.27
NUP50-219ENST00000497960 KRT36O76013 467 aa13.37□□□□□ -0.27
NUP50-219ENST00000497960 OR7A10O76100 309 aa13.37□□□□□ -0.27
NUP50-219ENST00000497960 IGF2P01344 180 aa13.37□□□□□ -0.27
NUP50-219ENST00000497960 SAGP10523 405 aaPredicted RBP13.37□□□□□ -0.27
NUP50-219ENST00000497960 GPR4P46093 362 aa13.37□□□□□ -0.27
NUP50-219ENST00000497960 CLEC12BQ2HXU8 276 aa13.37□□□□□ -0.27
NUP50-219ENST00000497960 TBPL2Q6SJ96 375 aa13.37□□□□□ -0.27
NUP50-219ENST00000497960 CLEC9AQ6UXN8 241 aa13.37□□□□□ -0.27
NUP50-219ENST00000497960 B3GLCTQ6Y288 498 aa13.37□□□□□ -0.27
NUP50-219ENST00000497960 CCDC36Q8IYA8 594 aa13.37□□□□□ -0.27
NUP50-219ENST00000497960 RNF113BQ8IZP6 322 aaKnown RBP13.37□□□□□ -0.27
NUP50-219ENST00000497960 CIARTQ8N365 385 aaPredicted RBP13.37□□□□□ -0.27
NUP50-219ENST00000497960 PAPD5Q8NDF8 572 aaKnown RBP13.37□□□□□ -0.27
NUP50-219ENST00000497960 OR4K5Q8NGD3 323 aa13.37□□□□□ -0.27
NUP50-219ENST00000497960 SLCO4A1Q96BD0 722 aa13.37□□□□□ -0.27
NUP50-219ENST00000497960 BPIFA2Q96DR5 249 aa13.37□□□□□ -0.27
NUP50-219ENST00000497960 ADAD1Q96M93 576 aaKnown RBP13.37□□□□□ -0.27
NUP50-219ENST00000497960 SMR3AQ99954 134 aa13.37□□□□□ -0.27
NUP50-219ENST00000497960 DENND2DQ9H6A0 471 aaPredicted RBP13.37□□□□□ -0.27
NUP50-219ENST00000497960 BARX1Q9HBU1 254 aaPredicted RBP13.37□□□□□ -0.27
NUP50-219ENST00000497960 VNN3Q9NY84 501 aa13.37□□□□□ -0.27
NUP50-219ENST00000497960 ZNF229Q9UJW7 825 aa13.37□□□□□ -0.27
NUP50-219ENST00000497960 MOKQ9UQ07 419 aa13.37□□□□□ -0.27
NUP50-219ENST00000497960 TMEM5Q9Y2B1 443 aa13.37□□□□□ -0.27
NUP50-219ENST00000497960 AP4S1Q9Y587 144 aa13.37□□□□□ -0.27
NUP50-219ENST00000497960 TLN2Q9Y4G6 2542 aa13.36□□□□□ -0.27
NUP50-219ENST00000497960 SH3PXD2BA1X283 911 aa13.36□□□□□ -0.27
NUP50-219ENST00000497960 ZNF99A8MXY4 864 aaPredicted RBP13.36□□□□□ -0.27
NUP50-219ENST00000497960 RNF13O43567 381 aa13.36□□□□□ -0.27
NUP50-219ENST00000497960 OR10H3O60404 316 aa13.36□□□□□ -0.27
NUP50-219ENST00000497960 DEAF1O75398 565 aaPredicted RBP13.36□□□□□ -0.27
NUP50-219ENST00000497960 E2F6O75461 281 aa13.36□□□□□ -0.27
NUP50-219ENST00000497960 CRYAAP02489 173 aa13.36□□□□□ -0.27
NUP50-219ENST00000497960 FCGR1AP12314 374 aa13.36□□□□□ -0.27
NUP50-219ENST00000497960 BMP4P12644 408 aa13.36□□□□□ -0.27
NUP50-219ENST00000497960 IFNGR1P15260 489 aa13.36□□□□□ -0.27
NUP50-219ENST00000497960 APOBEC3AP31941 199 aaPredicted RBP13.36□□□□□ -0.27
NUP50-219ENST00000497960 CAPZA2P47755 286 aa13.36□□□□□ -0.27
NUP50-219ENST00000497960 TUBA1BP68363 451 aa13.36□□□□□ -0.27
NUP50-219ENST00000497960 TUBA4AP68366 448 aa13.36□□□□□ -0.27
NUP50-219ENST00000497960 LSM11P83369 360 aaKnown RBP eCLIP13.36□□□□□ -0.27
NUP50-219ENST00000497960 ZP4Q12836 540 aa13.36□□□□□ -0.27
NUP50-219ENST00000497960 PPP1R8Q12972 351 aaKnown RBP13.36□□□□□ -0.27
NUP50-219ENST00000497960 CAMK2DQ13557 499 aa13.36□□□□□ -0.27
NUP50-219ENST00000497960 SEC23BQ15437 767 aa13.36□□□□□ -0.27
NUP50-219ENST00000497960 C3orf36Q3SXR2 165 aa13.36□□□□□ -0.27
NUP50-219ENST00000497960 TUBA1AQ71U36 451 aa13.36□□□□□ -0.27
NUP50-219ENST00000497960 MEX3DQ86XN8 651 aaKnown RBP13.36□□□□□ -0.27
NUP50-219ENST00000497960 CDK20Q8IZL9 346 aa13.36□□□□□ -0.27
NUP50-219ENST00000497960 FAM169BQ8N8A8 192 aa13.36□□□□□ -0.27
NUP50-219ENST00000497960 PYDC1Q8WXC3 89 aa13.36□□□□□ -0.27
NUP50-219ENST00000497960 FAM46AQ96IP4 442 aaKnown RBP13.36□□□□□ -0.27
NUP50-219ENST00000497960 KATNB1Q9BVA0 655 aa13.36□□□□□ -0.27
NUP50-219ENST00000497960 ULBP2Q9BZM5 246 aa13.36□□□□□ -0.27
NUP50-219ENST00000497960 NELFAQ9H3P2 528 aa13.36□□□□□ -0.27
NUP50-219ENST00000497960 POFUT2Q9Y2G5 429 aa13.36□□□□□ -0.27
NUP50-219ENST00000497960 U3KQV3 271 aa13.36□□□□□ -0.27
NUP50-219ENST00000497960 IGHV1-18A0A0C4DH31 117 aa13.35□□□□□ -0.27
NUP50-219ENST00000497960 EFCAB9A8MZ26 197 aa13.35□□□□□ -0.27
NUP50-219ENST00000497960 CCNB2O95067 398 aa13.35□□□□□ -0.27
NUP50-219ENST00000497960 IGHV4-39P01824 125 aa13.35□□□□□ -0.27
NUP50-219ENST00000497960 CBR1P16152 277 aa13.35□□□□□ -0.27
NUP50-219ENST00000497960 IFNGR2P38484 337 aa13.35□□□□□ -0.27
NUP50-219ENST00000497960 CSNK1A1P48729 337 aa13.35□□□□□ -0.27
NUP50-219ENST00000497960 BIDP55957 195 aa13.35□□□□□ -0.27
NUP50-219ENST00000497960 PRKCDQ05655 676 aa13.35□□□□□ -0.27
NUP50-219ENST00000497960 GK3PQ14409 553 aa13.35□□□□□ -0.27
NUP50-219ENST00000497960 PHYHD1Q5SRE7 291 aa13.35□□□□□ -0.27
NUP50-219ENST00000497960 ZFP1Q6P2D0 407 aa13.35□□□□□ -0.27
NUP50-219ENST00000497960 NHLRC1Q6VVB1 395 aa13.35□□□□□ -0.27
NUP50-219ENST00000497960 SLC35D2Q76EJ3 337 aa13.35□□□□□ -0.27
NUP50-219ENST00000497960 ZNF771Q7L3S4 317 aaPredicted RBP13.35□□□□□ -0.27
NUP50-219ENST00000497960 C10orf67Q8IYJ2 551 aa13.35□□□□□ -0.27
NUP50-219ENST00000497960 LRRC17Q8N6Y2 441 aa13.35□□□□□ -0.27
NUP50-219ENST00000497960 STMN2Q93045 179 aa13.35□□□□□ -0.27
NUP50-219ENST00000497960 ZNF837Q96EG3 531 aaPredicted RBP13.35□□□□□ -0.27
NUP50-219ENST00000497960 DUS3LQ96G46 650 aaKnown RBP13.35□□□□□ -0.27
NUP50-219ENST00000497960 FUZQ9BT04 418 aa13.35□□□□□ -0.27
NUP50-219ENST00000497960 CACNG6Q9BXT2 260 aa13.35□□□□□ -0.27
NUP50-219ENST00000497960 ARMC1Q9NVT9 282 aa13.35□□□□□ -0.27
NUP50-219ENST00000497960 TAS2R5Q9NYW4 299 aa13.35□□□□□ -0.27
NUP50-219ENST00000497960 CRNNQ9UBG3 495 aaPredicted RBP13.35□□□□□ -0.27
NUP50-219ENST00000497960 DNAJB9Q9UBS3 223 aa13.35□□□□□ -0.27
NUP50-219ENST00000497960 HTR3EA5X5Y0 456 aa13.34□□□□□ -0.27
NUP50-219ENST00000497960 IGLV1-44P01699 117 aa13.34□□□□□ -0.27
NUP50-219ENST00000497960 ASAH2BP0C7U1 165 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms