RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 LINC00470Q9BZP3 86 aa17.68■□□□□ 0.42
CTSD-206ENST00000497544 ASB6Q9NWX5 421 aa17.68■□□□□ 0.42
CTSD-206ENST00000497544 ELOVL5Q9NYP7 299 aa17.68■□□□□ 0.42
CTSD-206ENST00000497544 USE1Q9NZ43 259 aa17.68■□□□□ 0.42
CTSD-206ENST00000497544 TEX13CA0A0J9YWL9 993 aa17.67■□□□□ 0.42
CTSD-206ENST00000497544 CENPBD1B2RD01 187 aa17.67■□□□□ 0.42
CTSD-206ENST00000497544 M0R3G1 203 aa17.67■□□□□ 0.42
CTSD-206ENST00000497544 SOCS2O14508 198 aa17.67■□□□□ 0.42
CTSD-206ENST00000497544 ALDH3A2P51648 485 aa17.67■□□□□ 0.42
CTSD-206ENST00000497544 CRISP1P54107 249 aa17.67■□□□□ 0.42
CTSD-206ENST00000497544 RIPK1Q13546 671 aa17.67■□□□□ 0.42
CTSD-206ENST00000497544 LRRC36Q1X8D7 754 aa17.67■□□□□ 0.42
CTSD-206ENST00000497544 LPCAT4Q643R3 524 aa17.67■□□□□ 0.42
CTSD-206ENST00000497544 Q6ZT83 130 aa17.67■□□□□ 0.42
CTSD-206ENST00000497544 ZNF519Q8TB69 540 aa17.67■□□□□ 0.42
CTSD-206ENST00000497544 HDAC2Q92769 488 aaKnown RBP17.67■□□□□ 0.42
CTSD-206ENST00000497544 RBP7Q96R05 134 aa17.67■□□□□ 0.42
CTSD-206ENST00000497544 SLC29A1Q99808 456 aa17.67■□□□□ 0.42
CTSD-206ENST00000497544 TEX12Q9BXU0 123 aa17.67■□□□□ 0.42
CTSD-206ENST00000497544 GLTPQ9NZD2 209 aa17.67■□□□□ 0.42
CTSD-206ENST00000497544 NKX1-2Q9UD57 310 aaPredicted RBP17.67■□□□□ 0.42
CTSD-206ENST00000497544 TMEFF2Q9UIK5 374 aaPredicted RBP17.67■□□□□ 0.42
CTSD-206ENST00000497544 FOXD3Q9UJU5 478 aaPredicted RBP17.67■□□□□ 0.42
CTSD-206ENST00000497544 ZNF587BE7ETH6 402 aa17.66■□□□□ 0.42
CTSD-206ENST00000497544 BHLHE40O14503 412 aa17.66■□□□□ 0.42
CTSD-206ENST00000497544 TXNDC12O95881 172 aa17.66■□□□□ 0.42
CTSD-206ENST00000497544 ALPLP05186 524 aa17.66■□□□□ 0.42
CTSD-206ENST00000497544 PGA4P0DJD7 388 aa17.66■□□□□ 0.42
CTSD-206ENST00000497544 PGA3P0DJD8 388 aa17.66■□□□□ 0.42
CTSD-206ENST00000497544 CDH2P19022 906 aaPredicted RBP17.66■□□□□ 0.42
CTSD-206ENST00000497544 GIPRP48546 466 aa17.66■□□□□ 0.42
CTSD-206ENST00000497544 RAD23AP54725 363 aa17.66■□□□□ 0.42
CTSD-206ENST00000497544 MYBPC1Q00872 1141 aa17.66■□□□□ 0.42
CTSD-206ENST00000497544 RUNX1T1Q06455 604 aa17.66■□□□□ 0.42
CTSD-206ENST00000497544 LGALS3BPQ08380 585 aa17.66■□□□□ 0.42
CTSD-206ENST00000497544 KRR1Q13601 381 aaKnown RBP17.66■□□□□ 0.42
CTSD-206ENST00000497544 GINS1Q14691 196 aa17.66■□□□□ 0.42
CTSD-206ENST00000497544 FBXL19-AS1Q494R0 122 aa17.66■□□□□ 0.42
CTSD-206ENST00000497544 SLC35F1Q5T1Q4 408 aa17.66■□□□□ 0.42
CTSD-206ENST00000497544 SLC27A4Q6P1M0 643 aa17.66■□□□□ 0.42
CTSD-206ENST00000497544 WDFY1Q8IWB7 410 aa17.66■□□□□ 0.42
CTSD-206ENST00000497544 LNX2Q8N448 690 aa17.66■□□□□ 0.42
CTSD-206ENST00000497544 SYT14Q8NB59 555 aa17.66■□□□□ 0.42
CTSD-206ENST00000497544 NOXO1Q8NFA2 376 aa17.66■□□□□ 0.42
CTSD-206ENST00000497544 RNASE6Q93091 150 aaKnown RBP17.66■□□□□ 0.42
CTSD-206ENST00000497544 TMEM54Q969K7 222 aa17.66■□□□□ 0.42
CTSD-206ENST00000497544 RASD2Q96D21 266 aa17.66■□□□□ 0.42
CTSD-206ENST00000497544 ALG12Q9BV10 488 aa17.66■□□□□ 0.42
CTSD-206ENST00000497544 ULBP2Q9BZM5 246 aa17.66■□□□□ 0.42
CTSD-206ENST00000497544 CASQ2O14958 399 aaPredicted RBP17.65■□□□□ 0.42
CTSD-206ENST00000497544 NR2C1P13056 603 aa17.65■□□□□ 0.42
CTSD-206ENST00000497544 CD79BP40259 229 aa17.65■□□□□ 0.42
CTSD-206ENST00000497544 ROR2Q01974 943 aaKnown RBP17.65■□□□□ 0.42
CTSD-206ENST00000497544 CD47Q08722 323 aa17.65■□□□□ 0.42
CTSD-206ENST00000497544 ITGADQ13349 1161 aa17.65■□□□□ 0.42
CTSD-206ENST00000497544 P2RY6Q15077 328 aa17.65■□□□□ 0.42
CTSD-206ENST00000497544 JAZF1Q86VZ6 243 aa17.65■□□□□ 0.42
CTSD-206ENST00000497544 GABRG1Q8N1C3 465 aa17.65■□□□□ 0.42
CTSD-206ENST00000497544 OR52E2Q8NGJ4 325 aa17.65■□□□□ 0.42
CTSD-206ENST00000497544 OR4Q3Q8NH05 313 aa17.65■□□□□ 0.42
CTSD-206ENST00000497544 OR4K13Q8NH42 304 aa17.65■□□□□ 0.42
CTSD-206ENST00000497544 FNDC8Q8TC99 324 aa17.65■□□□□ 0.42
CTSD-206ENST00000497544 KCNK17Q96T54 332 aa17.65■□□□□ 0.42
CTSD-206ENST00000497544 MRPL13Q9BYD1 178 aaKnown RBP17.65■□□□□ 0.42
CTSD-206ENST00000497544 C8orf4Q9NR00 106 aa17.65■□□□□ 0.42
CTSD-206ENST00000497544 GALNT8Q9NY28 637 aa17.65■□□□□ 0.42
CTSD-206ENST00000497544 MALT1Q9UDY8 824 aa17.65■□□□□ 0.42
CTSD-206ENST00000497544 CIB4A0PJX0 185 aa17.64■□□□□ 0.41
CTSD-206ENST00000497544 AHCYL1O43865 530 aa17.64■□□□□ 0.41
CTSD-206ENST00000497544 RENP00797 406 aa17.64■□□□□ 0.41
CTSD-206ENST00000497544 HMGN1P05114 100 aa17.64■□□□□ 0.41
CTSD-206ENST00000497544 QDPRP09417 244 aa17.64■□□□□ 0.41
CTSD-206ENST00000497544 HIST1H1CP16403 213 aaKnown RBP17.64■□□□□ 0.41
CTSD-206ENST00000497544 PEX2P28328 305 aa17.64■□□□□ 0.41
CTSD-206ENST00000497544 MPGP29372 298 aa17.64■□□□□ 0.41
CTSD-206ENST00000497544 CDK5Q00535 292 aa17.64■□□□□ 0.41
CTSD-206ENST00000497544 FAM27E3Q08E93 113 aa17.64■□□□□ 0.41
CTSD-206ENST00000497544 NPRL3Q12980 569 aa17.64■□□□□ 0.41
CTSD-206ENST00000497544 PTGES3Q15185 160 aaKnown RBP17.64■□□□□ 0.41
CTSD-206ENST00000497544 PGGHGQ32M88 737 aa17.64■□□□□ 0.41
CTSD-206ENST00000497544 MESTQ5EB52 335 aa17.64■□□□□ 0.41
CTSD-206ENST00000497544 PHYHD1Q5SRE7 291 aa17.64■□□□□ 0.41
CTSD-206ENST00000497544 TMEM236Q5W0B7 351 aa17.64■□□□□ 0.41
CTSD-206ENST00000497544 ADCK1Q86TW2 530 aa17.64■□□□□ 0.41
CTSD-206ENST00000497544 GALNT4Q8N4A0 578 aa17.64■□□□□ 0.41
CTSD-206ENST00000497544 IQCF1Q8N6M8 205 aa17.64■□□□□ 0.41
CTSD-206ENST00000497544 ALKBH3Q96Q83 286 aaPredicted RBP17.64■□□□□ 0.41
CTSD-206ENST00000497544 HDHD5Q9BXW7 423 aa17.64■□□□□ 0.41
CTSD-206ENST00000497544 RIBC2Q9H4K1 309 aa17.64■□□□□ 0.41
CTSD-206ENST00000497544 CRLF2Q9HC73 371 aa17.64■□□□□ 0.41
CTSD-206ENST00000497544 GPR35Q9HC97 309 aa17.64■□□□□ 0.41
CTSD-206ENST00000497544 HCFC1P51610 2035 aa17.64■□□□□ 0.41
CTSD-206ENST00000497544 PRSS37A4D1T9 235 aa17.63■□□□□ 0.41
CTSD-206ENST00000497544 ATP6V1G2O95670 118 aa17.63■□□□□ 0.41
CTSD-206ENST00000497544 IGHV1-2P23083 117 aa17.63■□□□□ 0.41
CTSD-206ENST00000497544 GRK5P34947 590 aa17.63■□□□□ 0.41
CTSD-206ENST00000497544 CDKN2AP42771 156 aaKnown RBP17.63■□□□□ 0.41
CTSD-206ENST00000497544 TGFBR3Q03167 851 aa17.63■□□□□ 0.41
CTSD-206ENST00000497544 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.63■□□□□ 0.41
CTSD-206ENST00000497544 HIST3H3Q16695 136 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms