RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 AMDHD2Q9Y303 409 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 WNT6Q9Y6F9 365 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 PLXNC1O60486 1568 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 ABCC5O15440 1437 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 ZCWPW2A0A1B0GU75 182 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 A0A1B0GVI7 797 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 PRSS37A4D1T9 235 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 FAM90A8PA6NJQ4 464 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 SDR42E2A6NKP2 422 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 SLC38A8A6NNN8 435 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 HSPB2A8KAH6 182 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 ZNF99A8MXY4 864 aaPredicted RBP2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 H7C417 338 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 M0R3G1 203 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 RGS16O15492 202 aaPredicted RBP2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 RS1O15537 224 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 PPIHO43447 177 aaKnown RBP2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 CDC40O60508 579 aaKnown RBP eCLIP2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 MRPS14O60783 128 aaKnown RBP2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 EDF1O60869 148 aaKnown RBP2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 NKX2-2O95096 273 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 LALBAP00709 142 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 ATP1A1P05023 1023 aaKnown RBP2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 CD1AP06126 327 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 FAM90A13PP0C7W8 464 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 FAM90A24PP0C7X0 464 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 FCER1AP12319 257 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 FOLR1P15328 257 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 IL7RP16871 459 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 FGF7P21781 194 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 HMGB2P26583 209 aaKnown RBP2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 RGRP47804 291 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 NPBWR2P48146 333 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 EFNA5P52803 228 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 CDH12P55289 794 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 FOXL2P58012 376 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 CKS1BP61024 79 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 SNRPD2P62316 118 aaKnown RBP2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 RPL32P62910 135 aaKnown RBP2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 DEFA5Q01523 94 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 EGR4Q05215 589 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 CD47Q08722 323 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 FOXE3Q13461 319 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 ELAVL3Q14576 367 aaKnown RBP2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 NECTIN1Q15223 517 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 HSPB2Q16082 182 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 MAPK14Q16539 360 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 POU2AF1Q16633 256 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 PLPPR5Q32ZL2 321 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 FAM153CQ494X1 144 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 CD300EQ496F6 205 aaPredicted RBP2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 CBWD6Q4V339 395 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 ZNF658BQ4V348 819 aaPredicted RBP2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 PYCR3Q53H96 274 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 CYBRD1Q53TN4 286 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 TCTEX1D4Q5JR98 221 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 TPRG1LQ5T0D9 272 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 FAM102AQ5T9C2 384 aaPredicted RBP2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 SAXO2Q658L1 398 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 TMEM198Q66K66 360 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 H3F3CQ6NXT2 135 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 PNCKQ6P2M8 343 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 HACD2Q6Y1H2 254 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 SLC29A4Q7RTT9 530 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 ZNF720Q7Z2F6 126 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 PTOV1Q86YD1 416 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 C4orf19Q8IY42 314 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 CMTM8Q8IZV2 173 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 TMEM251Q8N6I4 163 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 TTC9BQ8N6N2 239 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 ATP6V1C2Q8NEY4 427 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 B3GNT7Q8NFL0 401 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 BPIFB6Q8NFQ5 453 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 OR4P4Q8NGL7 312 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 OR51F2Q8NH61 342 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 SLC25A43Q8WUT9 341 aaPredicted RBP2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 TNFAIP8L1Q8WVP5 186 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 TAAR8Q969N4 342 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 FYTTD1Q96QD9 318 aaKnown RBP2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 RAB40CQ96S21 281 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 MESP1Q9BRJ9 268 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 MAP1LC3CQ9BXW4 147 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 CHST5Q9GZS9 411 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 PRO1933Q9H354 126 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 BOLA2Q9H3K6 86 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 FAM83DQ9H4H8 585 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 NHEJ1Q9H9Q4 299 aaPredicted RBP2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 ZBTB26Q9HCK0 441 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 IL17RBQ9NRM6 502 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 PIGLQ9Y2B2 252 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 CHST2Q9Y4C5 530 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 A3GALT2U3KPV4 340 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 BCL9LQ86UU0 1499 aa2.8□□□□□ -1.96
SNRNP48-202ENST00000496946 POLR2AP24928 1970 aaKnown RBP2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 A0A087WWL8 130 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 CENPVL1A0A0U1RR11 272 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 MYMKA6NI61 221 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 ANKRD30BLA7E2S9 258 aa2.79□□□□□ -1.96
SNRNP48-202ENST00000496946 C17orf105B2RV13 164 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms